RNA–Protein interactions for RNA: ENST00000528339.5

SORL1-207, Transcript of sortilin related receptor 1, humanhuman

TSL 2

Gene SORL1, Length 3,703 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORL1-207ENST00000528339 TMEM72A0PK05 275 aa7.1□□□□□ -1.27
SORL1-207ENST00000528339 IFNW1P05000 195 aa7.1□□□□□ -1.27
SORL1-207ENST00000528339 HTR1AP08908 422 aa7.1□□□□□ -1.27
SORL1-207ENST00000528339 RRM2P31350 389 aa7.1□□□□□ -1.27
SORL1-207ENST00000528339 NR0B1P51843 470 aaKnown RBP7.1□□□□□ -1.27
SORL1-207ENST00000528339 IST1P53990 364 aa7.1□□□□□ -1.27
SORL1-207ENST00000528339 C17orf67Q0P5P2 114 aa7.1□□□□□ -1.27
SORL1-207ENST00000528339 COX10Q12887 443 aa7.1□□□□□ -1.27
SORL1-207ENST00000528339 ZNHIT3Q15649 155 aaPredicted RBP7.1□□□□□ -1.27
SORL1-207ENST00000528339 ULK3Q6PHR2 472 aa7.1□□□□□ -1.27
SORL1-207ENST00000528339 POMZP3Q6PJE2 187 aa7.1□□□□□ -1.27
SORL1-207ENST00000528339 C19orf48Q6RUI8 117 aa7.1□□□□□ -1.27
SORL1-207ENST00000528339 OPN5Q6U736 354 aa7.1□□□□□ -1.27
SORL1-207ENST00000528339 ZNF620Q6ZNG0 422 aa7.1□□□□□ -1.27
SORL1-207ENST00000528339 TAGAPQ8N103 731 aa7.1□□□□□ -1.27
SORL1-207ENST00000528339 SMYD1Q8NB12 490 aa7.1□□□□□ -1.27
SORL1-207ENST00000528339 ZNF248Q8NDW4 579 aa7.1□□□□□ -1.27
SORL1-207ENST00000528339 FBXO30Q8TB52 745 aa7.1□□□□□ -1.27
SORL1-207ENST00000528339 DOK4Q8TEW6 326 aa7.1□□□□□ -1.27
SORL1-207ENST00000528339 FAM162AQ96A26 154 aa7.1□□□□□ -1.27
SORL1-207ENST00000528339 C9orf16Q9BUW7 83 aa7.1□□□□□ -1.27
SORL1-207ENST00000528339 TRIM2Q9C040 744 aa7.1□□□□□ -1.27
SORL1-207ENST00000528339 KLHL4Q9C0H6 718 aa7.1□□□□□ -1.27
SORL1-207ENST00000528339 OR8D2Q9GZM6 311 aa7.1□□□□□ -1.27
SORL1-207ENST00000528339 YY1AP1Q9H869 796 aa7.1□□□□□ -1.27
SORL1-207ENST00000528339 ZBTB20Q9HC78 741 aaPredicted RBP7.1□□□□□ -1.27
SORL1-207ENST00000528339 HCFC1P51610 2035 aa7.09□□□□□ -1.27
SORL1-207ENST00000528339 IGKV3D-15A0A087WSY6 115 aa7.09□□□□□ -1.27
SORL1-207ENST00000528339 NPIPA5A0A0B4J1W7 369 aa7.09□□□□□ -1.27
SORL1-207ENST00000528339 NPIPA7E9PJI5 369 aa7.09□□□□□ -1.27
SORL1-207ENST00000528339 NPIPA8P0DM63 369 aa7.09□□□□□ -1.27
SORL1-207ENST00000528339 FKBP2P26885 142 aaKnown RBP7.09□□□□□ -1.27
SORL1-207ENST00000528339 OR1E2P47887 323 aa7.09□□□□□ -1.27
SORL1-207ENST00000528339 SSR4P51571 173 aa7.09□□□□□ -1.27
SORL1-207ENST00000528339 ESRRGP62508 458 aa7.09□□□□□ -1.27
SORL1-207ENST00000528339 RPS15P62841 145 aaKnown RBP7.09□□□□□ -1.27
SORL1-207ENST00000528339 SNCBQ16143 134 aa7.09□□□□□ -1.27
SORL1-207ENST00000528339 ZNF74Q16587 644 aa7.09□□□□□ -1.27
SORL1-207ENST00000528339 ATAD3BQ5T9A4 648 aa7.09□□□□□ -1.27
SORL1-207ENST00000528339 B3GNTL1Q67FW5 361 aaPredicted RBP7.09□□□□□ -1.27
SORL1-207ENST00000528339 MARCH3Q86UD3 253 aa7.09□□□□□ -1.27
SORL1-207ENST00000528339 RBMXL3Q8N7X1 1067 aaKnown RBP7.09□□□□□ -1.27
SORL1-207ENST00000528339 CATSPER1Q8NEC5 780 aa7.09□□□□□ -1.27
SORL1-207ENST00000528339 CDC26Q8NHZ8 85 aa7.09□□□□□ -1.27
SORL1-207ENST00000528339 RBM4BQ9BQ04 359 aaKnown RBP7.09□□□□□ -1.27
SORL1-207ENST00000528339 RBM4Q9BWF3 364 aaKnown RBP7.09□□□□□ -1.27
SORL1-207ENST00000528339 PRDM14Q9GZV8 571 aa7.09□□□□□ -1.27
SORL1-207ENST00000528339 FAM118AQ9NWS6 357 aa7.09□□□□□ -1.27
SORL1-207ENST00000528339 MRTO4Q9UKD2 239 aaKnown RBP7.09□□□□□ -1.27
SORL1-207ENST00000528339 MGAT4BQ9UQ53 548 aa7.09□□□□□ -1.27
SORL1-207ENST00000528339 SHANK1Q9Y566 2161 aa7.09□□□□□ -1.27
SORL1-207ENST00000528339 KDM4EB2RXH2 506 aaPredicted RBP7.09□□□□□ -1.27
SORL1-207ENST00000528339 DEAF1O75398 565 aaPredicted RBP7.09□□□□□ -1.27
SORL1-207ENST00000528339 PMS2P2O95744 297 aa7.09□□□□□ -1.27
SORL1-207ENST00000528339 LDLRP01130 860 aa7.09□□□□□ -1.27
SORL1-207ENST00000528339 IMPDH2P12268 514 aa7.09□□□□□ -1.27
SORL1-207ENST00000528339 ATP6V1C1P21283 382 aa7.09□□□□□ -1.27
SORL1-207ENST00000528339 SLC16A1P53985 500 aa7.09□□□□□ -1.27
SORL1-207ENST00000528339 MXRA7P84157 204 aa7.09□□□□□ -1.27
SORL1-207ENST00000528339 PLCXD2Q0VAA5 305 aa7.09□□□□□ -1.27
SORL1-207ENST00000528339 LARS2Q15031 903 aaKnown RBP7.09□□□□□ -1.27
SORL1-207ENST00000528339 ATP1A1-AS1Q5TC04 95 aa7.09□□□□□ -1.27
SORL1-207ENST00000528339 C16orf62Q7Z3J2 963 aa7.09□□□□□ -1.27
SORL1-207ENST00000528339 MDGA2Q7Z553 956 aa7.09□□□□□ -1.27
SORL1-207ENST00000528339 SLC26A7Q8TE54 656 aa7.09□□□□□ -1.27
SORL1-207ENST00000528339 TMEM255BQ8WV15 326 aa7.09□□□□□ -1.27
SORL1-207ENST00000528339 DNAJA4Q8WW22 397 aaPredicted RBP7.09□□□□□ -1.27
SORL1-207ENST00000528339 METTL21AQ8WXB1 218 aa7.09□□□□□ -1.27
SORL1-207ENST00000528339 WBP1Q96G27 269 aa7.09□□□□□ -1.27
SORL1-207ENST00000528339 HS6ST2Q96MM7 605 aa7.09□□□□□ -1.27
SORL1-207ENST00000528339 ZNF696Q9H7X3 374 aa7.09□□□□□ -1.27
SORL1-207ENST00000528339 MED17Q9NVC6 651 aa7.09□□□□□ -1.27
SORL1-207ENST00000528339 TAS2R5Q9NYW4 299 aa7.09□□□□□ -1.27
SORL1-207ENST00000528339 SEC14L3Q9UDX4 400 aa7.09□□□□□ -1.27
SORL1-207ENST00000528339 FBXL2Q9UKC9 423 aa7.09□□□□□ -1.27
SORL1-207ENST00000528339 CCDC182A6NF36 153 aa7.09□□□□□ -1.28
SORL1-207ENST00000528339 CENPBD1B2RD01 187 aa7.09□□□□□ -1.28
SORL1-207ENST00000528339 FRS3O43559 492 aa7.09□□□□□ -1.28
SORL1-207ENST00000528339 CST1P01037 141 aa7.09□□□□□ -1.28
SORL1-207ENST00000528339 LHX2P50458 406 aa7.09□□□□□ -1.28
SORL1-207ENST00000528339 RPS6KA3P51812 740 aa7.09□□□□□ -1.28
SORL1-207ENST00000528339 PGDP52209 483 aa7.09□□□□□ -1.28
SORL1-207ENST00000528339 AGFG1P52594 562 aaKnown RBP7.09□□□□□ -1.28
SORL1-207ENST00000528339 CXCR4P61073 352 aa7.09□□□□□ -1.28
SORL1-207ENST00000528339 CHRNB3Q05901 458 aa7.09□□□□□ -1.28
SORL1-207ENST00000528339 NDUFAF6Q330K2 333 aa7.09□□□□□ -1.28
SORL1-207ENST00000528339 SPDYE7PQ495Y7 208 aa7.09□□□□□ -1.28
SORL1-207ENST00000528339 Q6ZPB1 254 aaPredicted RBP7.09□□□□□ -1.28
SORL1-207ENST00000528339 RPS19BP1Q86WX3 136 aaKnown RBP7.09□□□□□ -1.28
SORL1-207ENST00000528339 SLC5A8Q8N695 610 aa7.09□□□□□ -1.28
SORL1-207ENST00000528339 OR10Q1Q8NGQ4 319 aa7.09□□□□□ -1.28
SORL1-207ENST00000528339 SLC9A6Q92581 669 aa7.09□□□□□ -1.28
SORL1-207ENST00000528339 N4BP2L2Q92802 583 aaPredicted RBP7.09□□□□□ -1.28
SORL1-207ENST00000528339 FER1L6-AS2Q96M78 137 aa7.09□□□□□ -1.28
SORL1-207ENST00000528339 ZNF184Q99676 751 aaPredicted RBP7.09□□□□□ -1.28
SORL1-207ENST00000528339 BDH2Q9BUT1 245 aa7.09□□□□□ -1.28
SORL1-207ENST00000528339 CNPPD1Q9BV87 410 aa7.09□□□□□ -1.28
SORL1-207ENST00000528339 OSBPL11Q9BXB4 747 aa7.09□□□□□ -1.28
SORL1-207ENST00000528339 NRIP3Q9NQ35 241 aa7.09□□□□□ -1.28
SORL1-207ENST00000528339 EQTNQ9NQ60 294 aa7.09□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms