RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 ATAD3BQ5T9A4 648 aa12.67□□□□□ -0.38
CAPN1-212ENST00000527887 METTL21CQ5VZV1 264 aa12.67□□□□□ -0.38
CAPN1-212ENST00000527887 OR4F3Q6IEY1 312 aa12.67□□□□□ -0.38
CAPN1-212ENST00000527887 HEPHL1Q6MZM0 1159 aa12.67□□□□□ -0.38
CAPN1-212ENST00000527887 ZNF550Q7Z398 422 aa12.67□□□□□ -0.38
CAPN1-212ENST00000527887 BIVMQ86UB2 503 aa12.67□□□□□ -0.38
CAPN1-212ENST00000527887 STEAP2Q8NFT2 490 aa12.67□□□□□ -0.38
CAPN1-212ENST00000527887 OR5AK3PQ8NH89 298 aa12.67□□□□□ -0.38
CAPN1-212ENST00000527887 ZFP90Q8TF47 636 aa12.67□□□□□ -0.38
CAPN1-212ENST00000527887 NUDT8Q8WV74 236 aa12.67□□□□□ -0.38
CAPN1-212ENST00000527887 C10orf82Q8WW14 230 aa12.67□□□□□ -0.38
CAPN1-212ENST00000527887 TMEM234Q8WY98 164 aa12.67□□□□□ -0.38
CAPN1-212ENST00000527887 ST8SIA1Q92185 356 aa12.67□□□□□ -0.38
CAPN1-212ENST00000527887 SLC35G5Q96KT7 338 aa12.67□□□□□ -0.38
CAPN1-212ENST00000527887 ZNF350Q9GZX5 532 aa12.67□□□□□ -0.38
CAPN1-212ENST00000527887 NPHS2Q9NP85 383 aa12.67□□□□□ -0.38
CAPN1-212ENST00000527887 SERINC1Q9NRX5 453 aa12.67□□□□□ -0.38
CAPN1-212ENST00000527887 KLHL13Q9P2N7 655 aa12.67□□□□□ -0.38
CAPN1-212ENST00000527887 ACANP16112 2415 aa12.67□□□□□ -0.38
CAPN1-212ENST00000527887 NPIPA5A0A0B4J1W7 369 aa12.66□□□□□ -0.38
CAPN1-212ENST00000527887 FAM171A2A8MVW0 826 aa12.66□□□□□ -0.38
CAPN1-212ENST00000527887 NPIPA7E9PJI5 369 aa12.66□□□□□ -0.38
CAPN1-212ENST00000527887 HDAC3O15379 428 aa12.66□□□□□ -0.38
CAPN1-212ENST00000527887 KLF4O43474 513 aa12.66□□□□□ -0.38
CAPN1-212ENST00000527887 EFNA2O43921 213 aa12.66□□□□□ -0.38
CAPN1-212ENST00000527887 SCN2BO60939 215 aa12.66□□□□□ -0.38
CAPN1-212ENST00000527887 YES1P07947 543 aa12.66□□□□□ -0.38
CAPN1-212ENST00000527887 NPIPA8P0DM63 369 aa12.66□□□□□ -0.38
CAPN1-212ENST00000527887 LBPP18428 481 aa12.66□□□□□ -0.38
CAPN1-212ENST00000527887 SLC7A1P30825 629 aa12.66□□□□□ -0.38
CAPN1-212ENST00000527887 ARFIP2P53365 341 aa12.66□□□□□ -0.38
CAPN1-212ENST00000527887 LRRC74AQ0VAA2 488 aa12.66□□□□□ -0.38
CAPN1-212ENST00000527887 QPRTQ15274 297 aa12.66□□□□□ -0.38
CAPN1-212ENST00000527887 PDZK1Q5T2W1 519 aa12.66□□□□□ -0.38
CAPN1-212ENST00000527887 OGFOD2Q6N063 350 aa12.66□□□□□ -0.38
CAPN1-212ENST00000527887 C3orf33Q6P1S2 294 aa12.66□□□□□ -0.38
CAPN1-212ENST00000527887 EIF3MQ7L2H7 374 aaKnown RBP12.66□□□□□ -0.38
CAPN1-212ENST00000527887 ZNF771Q7L3S4 317 aaPredicted RBP12.66□□□□□ -0.38
CAPN1-212ENST00000527887 FCRLAQ7L513 359 aa12.66□□□□□ -0.38
CAPN1-212ENST00000527887 C16orf62Q7Z3J2 963 aa12.66□□□□□ -0.38
CAPN1-212ENST00000527887 P3H2Q8IVL5 708 aa12.66□□□□□ -0.38
CAPN1-212ENST00000527887 ZNF614Q8N883 585 aa12.66□□□□□ -0.38
CAPN1-212ENST00000527887 WFDC11Q8NEX6 87 aa12.66□□□□□ -0.38
CAPN1-212ENST00000527887 OR5D16Q8NGK9 328 aa12.66□□□□□ -0.38
CAPN1-212ENST00000527887 OR4A15Q8NGL6 344 aa12.66□□□□□ -0.38
CAPN1-212ENST00000527887 C18orf12Q96KH6 178 aa12.66□□□□□ -0.38
CAPN1-212ENST00000527887 KLHDC3Q9BQ90 382 aa12.66□□□□□ -0.38
CAPN1-212ENST00000527887 RABEP2Q9H5N1 569 aa12.66□□□□□ -0.38
CAPN1-212ENST00000527887 KLHL9Q9P2J3 617 aa12.66□□□□□ -0.38
CAPN1-212ENST00000527887 SLC35A3Q9Y2D2 325 aa12.66□□□□□ -0.38
CAPN1-212ENST00000527887 TRPC5OSA6NMA1 111 aa12.65□□□□□ -0.38
CAPN1-212ENST00000527887 OIP5O43482 229 aa12.65□□□□□ -0.38
CAPN1-212ENST00000527887 UGT2B17O75795 530 aa12.65□□□□□ -0.38
CAPN1-212ENST00000527887 CSTAP01040 98 aa12.65□□□□□ -0.38
CAPN1-212ENST00000527887 THBDP07204 575 aa12.65□□□□□ -0.38
CAPN1-212ENST00000527887 PGCP20142 388 aa12.65□□□□□ -0.38
CAPN1-212ENST00000527887 LOXP28300 417 aaPredicted RBP12.65□□□□□ -0.38
CAPN1-212ENST00000527887 IRX1P78414 480 aaPredicted RBP12.65□□□□□ -0.38
CAPN1-212ENST00000527887 P2RY6Q15077 328 aa12.65□□□□□ -0.38
CAPN1-212ENST00000527887 GPR68Q15743 365 aa12.65□□□□□ -0.38
CAPN1-212ENST00000527887 FAM91A1Q658Y4 838 aa12.65□□□□□ -0.38
CAPN1-212ENST00000527887 ANKRD34AQ69YU3 496 aa12.65□□□□□ -0.38
CAPN1-212ENST00000527887 PLEKHM3Q6ZWE6 761 aa12.65□□□□□ -0.38
CAPN1-212ENST00000527887 SSX8Q7RTT4 187 aa12.65□□□□□ -0.38
CAPN1-212ENST00000527887 TRPM8Q7Z2W7 1104 aa12.65□□□□□ -0.38
CAPN1-212ENST00000527887 CLECL1Q8IZS7 167 aa12.65□□□□□ -0.38
CAPN1-212ENST00000527887 TMCO5AQ8N6Q1 288 aa12.65□□□□□ -0.38
CAPN1-212ENST00000527887 SLC25A43Q8WUT9 341 aaPredicted RBP12.65□□□□□ -0.38
CAPN1-212ENST00000527887 ROBO4Q8WZ75 1007 aa12.65□□□□□ -0.38
CAPN1-212ENST00000527887 NEURL3Q96EH8 262 aa12.65□□□□□ -0.38
CAPN1-212ENST00000527887 ZC3HAV1LQ96H79 300 aaKnown RBP12.65□□□□□ -0.38
CAPN1-212ENST00000527887 CCL19Q99731 98 aa12.65□□□□□ -0.38
CAPN1-212ENST00000527887 ACTR6Q9GZN1 396 aa12.65□□□□□ -0.38
CAPN1-212ENST00000527887 SAP130Q9H0E3 1048 aa12.65□□□□□ -0.38
CAPN1-212ENST00000527887 UBTD1Q9HAC8 227 aa12.65□□□□□ -0.38
CAPN1-212ENST00000527887 MEAF6Q9HAF1 191 aa12.65□□□□□ -0.38
CAPN1-212ENST00000527887 BCO1Q9HAY6 547 aa12.65□□□□□ -0.38
CAPN1-212ENST00000527887 NGBQ9NPG2 151 aa12.65□□□□□ -0.38
CAPN1-212ENST00000527887 ACER3Q9NUN7 267 aa12.65□□□□□ -0.38
CAPN1-212ENST00000527887 BTNL2Q9UIR0 455 aa12.65□□□□□ -0.38
CAPN1-212ENST00000527887 PRDM4Q9UKN5 801 aa12.65□□□□□ -0.38
CAPN1-212ENST00000527887 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.64□□□□□ -0.39
CAPN1-212ENST00000527887 CCT8L1PA6NM43 557 aa12.64□□□□□ -0.39
CAPN1-212ENST00000527887 ANKRD28O15084 1053 aa12.64□□□□□ -0.39
CAPN1-212ENST00000527887 FCMRO60667 390 aa12.64□□□□□ -0.39
CAPN1-212ENST00000527887 CCDC22O60826 627 aa12.64□□□□□ -0.39
CAPN1-212ENST00000527887 SHC1P29353 583 aa12.64□□□□□ -0.39
CAPN1-212ENST00000527887 ANXA11P50995 505 aaKnown RBP12.64□□□□□ -0.39
CAPN1-212ENST00000527887 RPS26P62854 115 aaKnown RBP12.64□□□□□ -0.39
CAPN1-212ENST00000527887 CSNK2A1P68400 391 aaPredicted RBP12.64□□□□□ -0.39
CAPN1-212ENST00000527887 SKP2Q13309 424 aa12.64□□□□□ -0.39
CAPN1-212ENST00000527887 TOMM34Q15785 309 aaPredicted RBP12.64□□□□□ -0.39
CAPN1-212ENST00000527887 SAXO2Q658L1 398 aa12.64□□□□□ -0.39
CAPN1-212ENST00000527887 EPGNQ6UW88 154 aa12.64□□□□□ -0.39
CAPN1-212ENST00000527887 TFAP2EQ6VUC0 442 aa12.64□□□□□ -0.39
CAPN1-212ENST00000527887 C22orf34Q6ZV56 151 aa12.64□□□□□ -0.39
CAPN1-212ENST00000527887 SPATA19Q7Z5L4 167 aa12.64□□□□□ -0.39
CAPN1-212ENST00000527887 TUSC5Q8IXB3 177 aa12.64□□□□□ -0.39
CAPN1-212ENST00000527887 GABRG1Q8N1C3 465 aa12.64□□□□□ -0.39
CAPN1-212ENST00000527887 TRIML2Q8N7C3 387 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms