RNA–Protein interactions for RNA: ENST00000527845.1

CKLF-CMTM1-202, Transcript of CKLF-CMTM1 readthrough, humanhuman

TSL 3

Gene CKLF-CMTM1, Length 504 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-CMTM1-202ENST00000527845 PDZK1Q5T2W1 519 aa15.5■□□□□ 0.07
CKLF-CMTM1-202ENST00000527845 EIF3MQ7L2H7 374 aaKnown RBP15.5■□□□□ 0.07
CKLF-CMTM1-202ENST00000527845 GALNT5Q7Z7M9 940 aa15.5■□□□□ 0.07
CKLF-CMTM1-202ENST00000527845 ZNF619Q8N2I2 560 aa15.5■□□□□ 0.07
CKLF-CMTM1-202ENST00000527845 TUBGCP3Q96CW5 907 aa15.5■□□□□ 0.07
CKLF-CMTM1-202ENST00000527845 ZHX1-C8orf76Q96EF9 292 aa15.5■□□□□ 0.07
CKLF-CMTM1-202ENST00000527845 SLC35G5Q96KT7 338 aa15.5■□□□□ 0.07
CKLF-CMTM1-202ENST00000527845 OR5B2Q96R09 309 aa15.5■□□□□ 0.07
CKLF-CMTM1-202ENST00000527845 MECRQ9BV79 373 aa15.5■□□□□ 0.07
CKLF-CMTM1-202ENST00000527845 TRIM2Q9C040 744 aa15.5■□□□□ 0.07
CKLF-CMTM1-202ENST00000527845 ANKZF1Q9H8Y5 726 aa15.5■□□□□ 0.07
CKLF-CMTM1-202ENST00000527845 EXD2Q9NVH0 621 aa15.5■□□□□ 0.07
CKLF-CMTM1-202ENST00000527845 NOP53Q9NZM5 478 aaKnown RBP15.5■□□□□ 0.07
CKLF-CMTM1-202ENST00000527845 GIMAP2Q9UG22 337 aa15.5■□□□□ 0.07
CKLF-CMTM1-202ENST00000527845 LGALS13Q9UHV8 139 aa15.5■□□□□ 0.07
CKLF-CMTM1-202ENST00000527845 LIPT1Q9Y234 373 aa15.5■□□□□ 0.07
CKLF-CMTM1-202ENST00000527845 MAGED1Q9Y5V3 778 aaPredicted RBP15.5■□□□□ 0.07
CKLF-CMTM1-202ENST00000527845 KCNE3Q9Y6H6 103 aa15.5■□□□□ 0.07
CKLF-CMTM1-202ENST00000527845 IGHV3-15A0A0B4J1V0 119 aa15.49■□□□□ 0.07
CKLF-CMTM1-202ENST00000527845 RNF223E7ERA6 249 aa15.49■□□□□ 0.07
CKLF-CMTM1-202ENST00000527845 ANKRD28O15084 1053 aa15.49■□□□□ 0.07
CKLF-CMTM1-202ENST00000527845 SMAD9O15198 467 aaKnown RBP15.49■□□□□ 0.07
CKLF-CMTM1-202ENST00000527845 TLX2O43763 284 aaPredicted RBP15.49■□□□□ 0.07
CKLF-CMTM1-202ENST00000527845 SKAP2O75563 359 aaPredicted RBP15.49■□□□□ 0.07
CKLF-CMTM1-202ENST00000527845 CSTAP01040 98 aa15.49■□□□□ 0.07
CKLF-CMTM1-202ENST00000527845 NUDT17P0C025 328 aa15.49■□□□□ 0.07
CKLF-CMTM1-202ENST00000527845 GGT1P19440 569 aa15.49■□□□□ 0.07
CKLF-CMTM1-202ENST00000527845 COX5AP20674 150 aa15.49■□□□□ 0.07
CKLF-CMTM1-202ENST00000527845 MATN1P21941 496 aa15.49■□□□□ 0.07
CKLF-CMTM1-202ENST00000527845 CLDN8P56748 225 aa15.49■□□□□ 0.07
CKLF-CMTM1-202ENST00000527845 HBA1P69905 142 aa15.49■□□□□ 0.07
CKLF-CMTM1-202ENST00000527845 PDK3Q15120 406 aa15.49■□□□□ 0.07
CKLF-CMTM1-202ENST00000527845 STK11Q15831 433 aa15.49■□□□□ 0.07
CKLF-CMTM1-202ENST00000527845 NDUFAF6Q330K2 333 aa15.49■□□□□ 0.07
CKLF-CMTM1-202ENST00000527845 ARHGAP11BQ3KRB8 267 aa15.49■□□□□ 0.07
CKLF-CMTM1-202ENST00000527845 SEZ6L2Q6UXD5 910 aa15.49■□□□□ 0.07
CKLF-CMTM1-202ENST00000527845 ZCCHC23Q6ZST2 131 aa15.49■□□□□ 0.07
CKLF-CMTM1-202ENST00000527845 C16orf62Q7Z3J2 963 aa15.49■□□□□ 0.07
CKLF-CMTM1-202ENST00000527845 ZNF100Q8IYN0 542 aa15.49■□□□□ 0.07
CKLF-CMTM1-202ENST00000527845 KRTCAP2Q8N6L1 136 aa15.49■□□□□ 0.07
CKLF-CMTM1-202ENST00000527845 KBTBD8Q8NFY9 601 aa15.49■□□□□ 0.07
CKLF-CMTM1-202ENST00000527845 OR5D16Q8NGK9 328 aa15.49■□□□□ 0.07
CKLF-CMTM1-202ENST00000527845 OR5AK3PQ8NH89 298 aa15.49■□□□□ 0.07
CKLF-CMTM1-202ENST00000527845 SPATA3Q8NHX4 192 aa15.49■□□□□ 0.07
CKLF-CMTM1-202ENST00000527845 HS6ST2Q96MM7 605 aa15.49■□□□□ 0.07
CKLF-CMTM1-202ENST00000527845 TRAF4Q9BUZ4 470 aaPredicted RBP15.49■□□□□ 0.07
CKLF-CMTM1-202ENST00000527845 THUMPD3Q9BV44 507 aaKnown RBP15.49■□□□□ 0.07
CKLF-CMTM1-202ENST00000527845 REG4Q9BYZ8 158 aa15.49■□□□□ 0.07
CKLF-CMTM1-202ENST00000527845 ZNF350Q9GZX5 532 aa15.49■□□□□ 0.07
CKLF-CMTM1-202ENST00000527845 SLCO5A1Q9H2Y9 848 aa15.49■□□□□ 0.07
CKLF-CMTM1-202ENST00000527845 POLE3Q9NRF9 147 aa15.49■□□□□ 0.07
CKLF-CMTM1-202ENST00000527845 ING1Q9UK53 422 aaPredicted RBP15.49■□□□□ 0.07
CKLF-CMTM1-202ENST00000527845 PCDHGB4Q9UN71 923 aa15.49■□□□□ 0.07
CKLF-CMTM1-202ENST00000527845 MGAT4BQ9UQ53 548 aa15.49■□□□□ 0.07
CKLF-CMTM1-202ENST00000527845 SLC35A3Q9Y2D2 325 aa15.49■□□□□ 0.07
CKLF-CMTM1-202ENST00000527845 PRR14LQ5THK1 2151 aa15.49■□□□□ 0.07
CKLF-CMTM1-202ENST00000527845 NUP214P35658 2090 aaPredicted RBP15.48■□□□□ 0.07
CKLF-CMTM1-202ENST00000527845 GOLGA8QA0A0J9YX86 632 aa15.48■□□□□ 0.07
CKLF-CMTM1-202ENST00000527845 GOLGA8OA6NCC3 632 aa15.48■□□□□ 0.07
CKLF-CMTM1-202ENST00000527845 ESPNB1AK53 854 aa15.48■□□□□ 0.07
CKLF-CMTM1-202ENST00000527845 GOLGA8NF8WBI6 632 aa15.48■□□□□ 0.07
CKLF-CMTM1-202ENST00000527845 RNASET2O00584 256 aaKnown RBP15.48■□□□□ 0.07
CKLF-CMTM1-202ENST00000527845 DNPH1O43598 174 aa15.48■□□□□ 0.07
CKLF-CMTM1-202ENST00000527845 LYZL6O75951 148 aa15.48■□□□□ 0.07
CKLF-CMTM1-202ENST00000527845 THBS1P07996 1170 aa15.48■□□□□ 0.07
CKLF-CMTM1-202ENST00000527845 CDKN1AP38936 164 aa15.48■□□□□ 0.07
CKLF-CMTM1-202ENST00000527845 APOBEC1P41238 236 aaKnown RBP15.48■□□□□ 0.07
CKLF-CMTM1-202ENST00000527845 DIO1P49895 249 aa15.48■□□□□ 0.07
CKLF-CMTM1-202ENST00000527845 RNF144AP50876 292 aaPredicted RBP15.48■□□□□ 0.07
CKLF-CMTM1-202ENST00000527845 EMX2Q04743 252 aa15.48■□□□□ 0.07
CKLF-CMTM1-202ENST00000527845 KRTAP1-1Q07627 177 aa15.48■□□□□ 0.07
CKLF-CMTM1-202ENST00000527845 IFFO1Q0D2I5 559 aa15.48■□□□□ 0.07
CKLF-CMTM1-202ENST00000527845 GPR68Q15743 365 aa15.48■□□□□ 0.07
CKLF-CMTM1-202ENST00000527845 SYT14P1Q58G82 188 aa15.48■□□□□ 0.07
CKLF-CMTM1-202ENST00000527845 ATAD3BQ5T9A4 648 aa15.48■□□□□ 0.07
CKLF-CMTM1-202ENST00000527845 ABLIM2Q6H8Q1 611 aa15.48■□□□□ 0.07
CKLF-CMTM1-202ENST00000527845 TMPPEQ6ZT21 453 aa15.48■□□□□ 0.07
CKLF-CMTM1-202ENST00000527845 CXXC5Q7LFL8 322 aaKnown RBP15.48■□□□□ 0.07
CKLF-CMTM1-202ENST00000527845 C6orf120Q7Z4R8 191 aa15.48■□□□□ 0.07
CKLF-CMTM1-202ENST00000527845 DTX2Q86UW9 622 aa15.48■□□□□ 0.07
CKLF-CMTM1-202ENST00000527845 MIPOL1Q8TD10 442 aa15.48■□□□□ 0.07
CKLF-CMTM1-202ENST00000527845 TCP10LQ8TDR4 215 aa15.48■□□□□ 0.07
CKLF-CMTM1-202ENST00000527845 C3orf30Q96M34 536 aa15.48■□□□□ 0.07
CKLF-CMTM1-202ENST00000527845 MDFIQ99750 246 aa15.48■□□□□ 0.07
CKLF-CMTM1-202ENST00000527845 ROPN1BQ9BZX4 212 aaPredicted RBP15.48■□□□□ 0.07
CKLF-CMTM1-202ENST00000527845 ROPN1Q9HAT0 212 aaPredicted RBP15.48■□□□□ 0.07
CKLF-CMTM1-202ENST00000527845 ACER3Q9NUN7 267 aa15.48■□□□□ 0.07
CKLF-CMTM1-202ENST00000527845 CISD1Q9NZ45 108 aaKnown RBP15.48■□□□□ 0.07
CKLF-CMTM1-202ENST00000527845 SLC17A7Q9P2U7 560 aa15.48■□□□□ 0.07
CKLF-CMTM1-202ENST00000527845 PRSS50Q9UI38 385 aa15.48■□□□□ 0.07
CKLF-CMTM1-202ENST00000527845 ZDHHC2Q9UIJ5 367 aa15.48■□□□□ 0.07
CKLF-CMTM1-202ENST00000527845 IGKV3D-15A0A087WSY6 115 aa15.47■□□□□ 0.07
CKLF-CMTM1-202ENST00000527845 RNF103-CHMP3A0A140T963 221 aa15.47■□□□□ 0.07
CKLF-CMTM1-202ENST00000527845 DPRXA6NFQ7 191 aa15.47■□□□□ 0.07
CKLF-CMTM1-202ENST00000527845 SULT2B1O00204 365 aa15.47■□□□□ 0.07
CKLF-CMTM1-202ENST00000527845 UGT2B17O75795 530 aa15.47■□□□□ 0.07
CKLF-CMTM1-202ENST00000527845 CYP7B1O75881 506 aa15.47■□□□□ 0.07
CKLF-CMTM1-202ENST00000527845 PGM3O95394 542 aa15.47■□□□□ 0.07
CKLF-CMTM1-202ENST00000527845 H6PDO95479 791 aa15.47■□□□□ 0.07
CKLF-CMTM1-202ENST00000527845 G6PDP11413 515 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms