RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 ATP5A1P25705 553 aaKnown RBP11.6□□□□□ -0.55
CAPN1-208ENST00000527323 PRKAR1BP31321 381 aa11.6□□□□□ -0.55
CAPN1-208ENST00000527323 OR12D2P58182 307 aa11.6□□□□□ -0.55
CAPN1-208ENST00000527323 POU6F2P78424 691 aaPredicted RBP11.6□□□□□ -0.55
CAPN1-208ENST00000527323 DPTQ07507 201 aa11.6□□□□□ -0.55
CAPN1-208ENST00000527323 PDGFRLQ15198 375 aa11.6□□□□□ -0.55
CAPN1-208ENST00000527323 ST3GAL2Q16842 350 aa11.6□□□□□ -0.55
CAPN1-208ENST00000527323 ITPRIPL2Q3MIP1 535 aa11.6□□□□□ -0.55
CAPN1-208ENST00000527323 PUS10Q3MIT2 529 aaKnown RBP11.6□□□□□ -0.55
CAPN1-208ENST00000527323 PRAMEF8Q5VWM4 474 aa11.6□□□□□ -0.55
CAPN1-208ENST00000527323 PRAMEF7Q5VXH5 474 aa11.6□□□□□ -0.55
CAPN1-208ENST00000527323 METRNLQ641Q3 311 aa11.6□□□□□ -0.55
CAPN1-208ENST00000527323 SFRP4Q6FHJ7 346 aaPredicted RBP11.6□□□□□ -0.55
CAPN1-208ENST00000527323 CYB561A3Q8NBI2 242 aa11.6□□□□□ -0.55
CAPN1-208ENST00000527323 C17orf47Q8NEP4 570 aa11.6□□□□□ -0.55
CAPN1-208ENST00000527323 TTLQ8NG68 377 aa11.6□□□□□ -0.55
CAPN1-208ENST00000527323 OR13C5Q8NGS8 318 aa11.6□□□□□ -0.55
CAPN1-208ENST00000527323 OR2T35Q8NGX2 323 aa11.6□□□□□ -0.55
CAPN1-208ENST00000527323 RPLP0P6Q8NHW5 317 aa11.6□□□□□ -0.55
CAPN1-208ENST00000527323 DOK4Q8TEW6 326 aa11.6□□□□□ -0.55
CAPN1-208ENST00000527323 MS4A3Q96HJ5 214 aa11.6□□□□□ -0.55
CAPN1-208ENST00000527323 SORCS2Q96PQ0 1159 aa11.6□□□□□ -0.55
CAPN1-208ENST00000527323 CHIAQ9BZP6 476 aa11.6□□□□□ -0.55
CAPN1-208ENST00000527323 MRPS30Q9NP92 439 aaKnown RBP11.6□□□□□ -0.55
CAPN1-208ENST00000527323 PRSS16Q9NQE7 514 aa11.6□□□□□ -0.55
CAPN1-208ENST00000527323 WDR45Q9Y484 360 aa11.6□□□□□ -0.55
CAPN1-208ENST00000527323 FREM2Q5SZK8 3169 aa11.59□□□□□ -0.55
CAPN1-208ENST00000527323 GPR37O15354 613 aa11.59□□□□□ -0.55
CAPN1-208ENST00000527323 SLC31A1O15431 190 aa11.59□□□□□ -0.55
CAPN1-208ENST00000527323 ZGLP1P0C6A0 271 aa11.59□□□□□ -0.55
CAPN1-208ENST00000527323 GKN3PP0CG01 181 aa11.59□□□□□ -0.55
CAPN1-208ENST00000527323 ERGP11308 486 aa11.59□□□□□ -0.55
CAPN1-208ENST00000527323 PITPNAQ00169 270 aa11.59□□□□□ -0.55
CAPN1-208ENST00000527323 GRK1Q15835 563 aa11.59□□□□□ -0.55
CAPN1-208ENST00000527323 ZNF687Q8N1G0 1237 aa11.59□□□□□ -0.55
CAPN1-208ENST00000527323 RLN3Q8WXF3 142 aa11.59□□□□□ -0.55
CAPN1-208ENST00000527323 PIGKQ92643 395 aa11.59□□□□□ -0.55
CAPN1-208ENST00000527323 CDS1Q92903 461 aa11.59□□□□□ -0.55
CAPN1-208ENST00000527323 YIPF5Q969M3 257 aa11.59□□□□□ -0.55
CAPN1-208ENST00000527323 MS4A6EQ96DS6 147 aa11.59□□□□□ -0.55
CAPN1-208ENST00000527323 ACTRT3Q9BYD9 372 aa11.59□□□□□ -0.55
CAPN1-208ENST00000527323 PITHD1Q9GZP4 211 aaPredicted RBP11.59□□□□□ -0.55
CAPN1-208ENST00000527323 C6orf106Q9H6K1 298 aaPredicted RBP11.59□□□□□ -0.55
CAPN1-208ENST00000527323 SIDT1Q9NXL6 827 aaKnown RBP11.59□□□□□ -0.55
CAPN1-208ENST00000527323 SPATA2Q9UM82 520 aa11.59□□□□□ -0.55
CAPN1-208ENST00000527323 PPIEQ9UNP9 301 aaKnown RBP11.59□□□□□ -0.55
CAPN1-208ENST00000527323 OR1A2Q9Y585 309 aa11.59□□□□□ -0.55
CAPN1-208ENST00000527323 IGKV1-8A0A0C4DH67 115 aa11.59□□□□□ -0.55
CAPN1-208ENST00000527323 C4orf51C9J302 202 aa11.59□□□□□ -0.55
CAPN1-208ENST00000527323 LRRN3E7EW58 273 aa11.59□□□□□ -0.55
CAPN1-208ENST00000527323 SAGP10523 405 aaPredicted RBP11.59□□□□□ -0.55
CAPN1-208ENST00000527323 NOS3P29474 1203 aa11.59□□□□□ -0.55
CAPN1-208ENST00000527323 CDONQ4KMG0 1287 aa11.59□□□□□ -0.55
CAPN1-208ENST00000527323 SLC48A1Q6P1K1 146 aa11.59□□□□□ -0.55
CAPN1-208ENST00000527323 ABHD17CQ6PCB6 329 aa11.59□□□□□ -0.55
CAPN1-208ENST00000527323 GLRX5Q86SX6 157 aa11.59□□□□□ -0.55
CAPN1-208ENST00000527323 CDK20Q8IZL9 346 aa11.59□□□□□ -0.55
CAPN1-208ENST00000527323 OR4D9Q8NGE8 314 aa11.59□□□□□ -0.55
CAPN1-208ENST00000527323 PFN4Q8NHR9 129 aa11.59□□□□□ -0.55
CAPN1-208ENST00000527323 GHSRQ92847 366 aa11.59□□□□□ -0.55
CAPN1-208ENST00000527323 AHCYL2Q96HN2 611 aaKnown RBP11.59□□□□□ -0.55
CAPN1-208ENST00000527323 HS6ST2Q96MM7 605 aa11.59□□□□□ -0.55
CAPN1-208ENST00000527323 TEAD3Q99594 435 aa11.59□□□□□ -0.55
CAPN1-208ENST00000527323 RBCK1Q9BYM8 510 aa11.59□□□□□ -0.55
CAPN1-208ENST00000527323 LRRN3Q9H3W5 708 aa11.59□□□□□ -0.55
CAPN1-208ENST00000527323 HEXA-AS1Q9H8Q6 139 aa11.59□□□□□ -0.55
CAPN1-208ENST00000527323 POLMQ9NP87 494 aaPredicted RBP11.59□□□□□ -0.55
CAPN1-208ENST00000527323 PRDM7Q9NQW5 492 aa11.59□□□□□ -0.55
CAPN1-208ENST00000527323 DZANK1Q9NVP4 752 aa11.59□□□□□ -0.55
CAPN1-208ENST00000527323 PTTG3PQ9NZH4 202 aa11.59□□□□□ -0.55
CAPN1-208ENST00000527323 COPZ2Q9P299 210 aa11.59□□□□□ -0.55
CAPN1-208ENST00000527323 ZNF443Q9Y2A4 671 aaPredicted RBP11.59□□□□□ -0.55
CAPN1-208ENST00000527323 TICRRQ7Z2Z1 1910 aa11.59□□□□□ -0.55
CAPN1-208ENST00000527323 A0A1B0GVI7 797 aa11.58□□□□□ -0.55
CAPN1-208ENST00000527323 IGLON5A6NGN9 336 aa11.58□□□□□ -0.55
CAPN1-208ENST00000527323 K7EQS6 105 aa11.58□□□□□ -0.55
CAPN1-208ENST00000527323 KLF4O43474 513 aa11.58□□□□□ -0.55
CAPN1-208ENST00000527323 ZIC2O95409 532 aaPredicted RBP11.58□□□□□ -0.55
CAPN1-208ENST00000527323 GYPBP06028 91 aa11.58□□□□□ -0.55
CAPN1-208ENST00000527323 F3P13726 295 aa11.58□□□□□ -0.55
CAPN1-208ENST00000527323 COL9A1P20849 921 aa11.58□□□□□ -0.55
CAPN1-208ENST00000527323 SHC2P98077 582 aa11.58□□□□□ -0.55
CAPN1-208ENST00000527323 CRYZQ08257 329 aaKnown RBP11.58□□□□□ -0.55
CAPN1-208ENST00000527323 CAMK2DQ13557 499 aa11.58□□□□□ -0.55
CAPN1-208ENST00000527323 GSG1Q2KHT4 349 aa11.58□□□□□ -0.55
CAPN1-208ENST00000527323 CCNJQ5T5M9 372 aa11.58□□□□□ -0.55
CAPN1-208ENST00000527323 HACD4Q5VWC8 232 aa11.58□□□□□ -0.55
CAPN1-208ENST00000527323 GPALPP1Q8IXQ4 340 aa11.58□□□□□ -0.55
CAPN1-208ENST00000527323 FBXL6Q8N531 539 aa11.58□□□□□ -0.55
CAPN1-208ENST00000527323 OR2A1Q8NGT9 310 aa11.58□□□□□ -0.55
CAPN1-208ENST00000527323 OR51A7Q8NH64 312 aa11.58□□□□□ -0.55
CAPN1-208ENST00000527323 CDX2Q99626 313 aaPredicted RBP11.58□□□□□ -0.55
CAPN1-208ENST00000527323 TIMP4Q99727 224 aa11.58□□□□□ -0.55
CAPN1-208ENST00000527323 METTL17Q9H7H0 456 aaPredicted RBP11.58□□□□□ -0.55
CAPN1-208ENST00000527323 MTHFD2LQ9H903 347 aaPredicted RBP11.58□□□□□ -0.55
CAPN1-208ENST00000527323 OR6C2Q9NZP2 312 aa11.58□□□□□ -0.55
CAPN1-208ENST00000527323 ASPMQ8IZT6 3477 aa11.58□□□□□ -0.56
CAPN1-208ENST00000527323 CDHR4A6H8M9 788 aa11.58□□□□□ -0.56
CAPN1-208ENST00000527323 TRABD2BA6NFA1 517 aa11.58□□□□□ -0.56
CAPN1-208ENST00000527323 DUXAA6NLW8 204 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms