RNA–Protein interactions for RNA: ENST00000525284.5

LRRK1-202, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-202ENST00000525284 KDM1BQ8NB78 822 aa12.88□□□□□ -0.35
LRRK1-202ENST00000525284 A0A1W2PQ09 198 aa12.88□□□□□ -0.35
LRRK1-202ENST00000525284 K7EQM0 130 aa12.88□□□□□ -0.35
LRRK1-202ENST00000525284 NCR1O76036 304 aa12.88□□□□□ -0.35
LRRK1-202ENST00000525284 NSA2O95478 260 aaKnown RBP12.88□□□□□ -0.35
LRRK1-202ENST00000525284 TK1P04183 234 aa12.88□□□□□ -0.35
LRRK1-202ENST00000525284 RPA2P15927 270 aa12.88□□□□□ -0.35
LRRK1-202ENST00000525284 SLC1A3P43003 542 aa12.88□□□□□ -0.35
LRRK1-202ENST00000525284 OR4C11Q6IEV9 310 aa12.88□□□□□ -0.35
LRRK1-202ENST00000525284 C1orf87Q8N0U7 546 aa12.88□□□□□ -0.35
LRRK1-202ENST00000525284 CSNK1A1LQ8N752 337 aa12.88□□□□□ -0.35
LRRK1-202ENST00000525284 KIAA1958Q8N8K9 716 aa12.88□□□□□ -0.35
LRRK1-202ENST00000525284 FCRL1Q96LA6 429 aa12.88□□□□□ -0.35
LRRK1-202ENST00000525284 RYDENQ9NUL5 291 aaKnown RBP12.88□□□□□ -0.35
LRRK1-202ENST00000525284 FAM198AQ9UFP1 575 aa12.88□□□□□ -0.35
LRRK1-202ENST00000525284 TRAPPC2LH3BP13 241 aa12.88□□□□□ -0.35
LRRK1-202ENST00000525284 FGF3P11487 239 aaPredicted RBP12.88□□□□□ -0.35
LRRK1-202ENST00000525284 NFYBP25208 207 aa12.88□□□□□ -0.35
LRRK1-202ENST00000525284 TPMTP51580 245 aa12.88□□□□□ -0.35
LRRK1-202ENST00000525284 ELOCQ15369 112 aa12.88□□□□□ -0.35
LRRK1-202ENST00000525284 PLEKHS1Q5SXH7 462 aa12.88□□□□□ -0.35
LRRK1-202ENST00000525284 SBSNQ6UWP8 590 aa12.88□□□□□ -0.35
LRRK1-202ENST00000525284 CLECL1Q8IZS7 167 aa12.88□□□□□ -0.35
LRRK1-202ENST00000525284 YIPF5Q969M3 257 aa12.88□□□□□ -0.35
LRRK1-202ENST00000525284 CASD1Q96PB1 797 aa12.88□□□□□ -0.35
LRRK1-202ENST00000525284 CMSS1Q9BQ75 279 aaKnown RBP12.88□□□□□ -0.35
LRRK1-202ENST00000525284 HCAR1Q9BXC0 346 aa12.88□□□□□ -0.35
LRRK1-202ENST00000525284 POLHQ9Y253 713 aa12.88□□□□□ -0.35
LRRK1-202ENST00000525284 IER3IP1Q9Y5U9 82 aa12.88□□□□□ -0.35
LRRK1-202ENST00000525284 WTIPA6NIX2 430 aaPredicted RBP12.88□□□□□ -0.35
LRRK1-202ENST00000525284 RNF212BA8MTL3 300 aa12.88□□□□□ -0.35
LRRK1-202ENST00000525284 TGM5O43548 720 aa12.88□□□□□ -0.35
LRRK1-202ENST00000525284 COTL1Q14019 142 aa12.88□□□□□ -0.35
LRRK1-202ENST00000525284 OR10R2Q8NGX6 335 aa12.88□□□□□ -0.35
LRRK1-202ENST00000525284 OR5B3Q8NH48 314 aa12.88□□□□□ -0.35
LRRK1-202ENST00000525284 SLC35B2Q8TB61 432 aa12.88□□□□□ -0.35
LRRK1-202ENST00000525284 ZNF251Q9BRH9 671 aa12.88□□□□□ -0.35
LRRK1-202ENST00000525284 RNH1P13489 461 aaKnown RBP12.88□□□□□ -0.35
LRRK1-202ENST00000525284 HBG1P69891 147 aa12.88□□□□□ -0.35
LRRK1-202ENST00000525284 HBG2P69892 147 aa12.88□□□□□ -0.35
LRRK1-202ENST00000525284 FAM189BP81408 668 aa12.88□□□□□ -0.35
LRRK1-202ENST00000525284 LTBQ06643 244 aa12.88□□□□□ -0.35
LRRK1-202ENST00000525284 RAB33AQ14088 237 aa12.88□□□□□ -0.35
LRRK1-202ENST00000525284 MKXQ8IYA7 352 aa12.88□□□□□ -0.35
LRRK1-202ENST00000525284 CERS5Q8N5B7 392 aa12.88□□□□□ -0.35
LRRK1-202ENST00000525284 IL17FQ96PD4 163 aa12.88□□□□□ -0.35
LRRK1-202ENST00000525284 SLC2A13Q96QE2 648 aa12.88□□□□□ -0.35
LRRK1-202ENST00000525284 UBL7Q96S82 380 aaPredicted RBP12.88□□□□□ -0.35
LRRK1-202ENST00000525284 ERVMER34-1Q9H9K5 563 aa12.88□□□□□ -0.35
LRRK1-202ENST00000525284 GALNT9Q9HCQ5 603 aa12.88□□□□□ -0.35
LRRK1-202ENST00000525284 I6L893 689 aaPredicted RBP12.87□□□□□ -0.35
LRRK1-202ENST00000525284 SCAMP2O15127 329 aaKnown RBP12.87□□□□□ -0.35
LRRK1-202ENST00000525284 ICMTO60725 284 aa12.87□□□□□ -0.35
LRRK1-202ENST00000525284 SIX6O95475 246 aa12.87□□□□□ -0.35
LRRK1-202ENST00000525284 MRPS10P82664 201 aaKnown RBP12.87□□□□□ -0.35
LRRK1-202ENST00000525284 MS4A13Q5J8X5 152 aa12.87□□□□□ -0.35
LRRK1-202ENST00000525284 LYPD4Q6UWN0 246 aa12.87□□□□□ -0.35
LRRK1-202ENST00000525284 USP50Q70EL3 339 aaPredicted RBP12.87□□□□□ -0.35
LRRK1-202ENST00000525284 SMAP2Q8WU79 429 aaPredicted RBP12.87□□□□□ -0.35
LRRK1-202ENST00000525284 GAB3Q8WWW8 586 aa12.87□□□□□ -0.35
LRRK1-202ENST00000525284 WWTR1Q9GZV5 400 aa12.87□□□□□ -0.35
LRRK1-202ENST00000525284 CHRDQ9H2X0 955 aa12.87□□□□□ -0.35
LRRK1-202ENST00000525284 KCMF1Q9P0J7 381 aa12.87□□□□□ -0.35
LRRK1-202ENST00000525284 TEX264Q9Y6I9 313 aa12.87□□□□□ -0.35
LRRK1-202ENST00000525284 OR6C68A6NDL8 312 aa12.87□□□□□ -0.35
LRRK1-202ENST00000525284 NDUFB2O95178 105 aa12.87□□□□□ -0.35
LRRK1-202ENST00000525284 TAS2R38P59533 333 aa12.87□□□□□ -0.35
LRRK1-202ENST00000525284 MFGE8Q08431 387 aaPredicted RBP12.87□□□□□ -0.35
LRRK1-202ENST00000525284 C1orf61Q13536 156 aa12.87□□□□□ -0.35
LRRK1-202ENST00000525284 C22orf39Q6P5X5 142 aa12.87□□□□□ -0.35
LRRK1-202ENST00000525284 GLB1L2Q8IW92 636 aa12.87□□□□□ -0.35
LRRK1-202ENST00000525284 SIGLECL1Q8N7X8 197 aa12.87□□□□□ -0.35
LRRK1-202ENST00000525284 SGPP1Q9BX95 441 aa12.87□□□□□ -0.35
LRRK1-202ENST00000525284 C1orf198Q9H425 327 aa12.87□□□□□ -0.35
LRRK1-202ENST00000525284 GPR34Q9UPC5 381 aa12.87□□□□□ -0.35
LRRK1-202ENST00000525284 SDHDO14521 159 aa12.87□□□□□ -0.35
LRRK1-202ENST00000525284 CACNG3O60359 315 aa12.87□□□□□ -0.35
LRRK1-202ENST00000525284 RAP2BP61225 183 aa12.87□□□□□ -0.35
LRRK1-202ENST00000525284 SMAD2Q15796 467 aaKnown RBP12.87□□□□□ -0.35
LRRK1-202ENST00000525284 C4orf36Q96KX1 117 aa12.87□□□□□ -0.35
LRRK1-202ENST00000525284 SLC29A1Q99808 456 aa12.87□□□□□ -0.35
LRRK1-202ENST00000525284 PLK3Q9H4B4 646 aa12.87□□□□□ -0.35
LRRK1-202ENST00000525284 TRAPPC2LQ9UL33 140 aa12.87□□□□□ -0.35
LRRK1-202ENST00000525284 SPATA31A1Q5TZJ5 1347 aa12.87□□□□□ -0.35
LRRK1-202ENST00000525284 CASP3P42574 277 aa12.87□□□□□ -0.35
LRRK1-202ENST00000525284 PRPS1P60891 318 aa12.87□□□□□ -0.35
LRRK1-202ENST00000525284 RAB11AP62491 216 aa12.87□□□□□ -0.35
LRRK1-202ENST00000525284 SIM1P81133 766 aaPredicted RBP12.87□□□□□ -0.35
LRRK1-202ENST00000525284 NSDHLQ15738 373 aa12.87□□□□□ -0.35
LRRK1-202ENST00000525284 MICAQ29983 383 aa12.87□□□□□ -0.35
LRRK1-202ENST00000525284 TXNRD3NBQ6F5E7 133 aa12.87□□□□□ -0.35
LRRK1-202ENST00000525284 ENTHD1Q8IYW4 607 aa12.87□□□□□ -0.35
LRRK1-202ENST00000525284 RNF141Q8WVD5 230 aa12.87□□□□□ -0.35
LRRK1-202ENST00000525284 ECHDC3Q96DC8 303 aa12.87□□□□□ -0.35
LRRK1-202ENST00000525284 TM7SF3Q9NS93 570 aa12.87□□□□□ -0.35
LRRK1-202ENST00000525284 C1orf123Q9NWV4 160 aa12.87□□□□□ -0.35
LRRK1-202ENST00000525284 FAM96BQ9Y3D0 163 aa12.87□□□□□ -0.35
LRRK1-202ENST00000525284 DEFA4P12838 97 aa12.87□□□□□ -0.35
LRRK1-202ENST00000525284 TYRP14679 529 aa12.87□□□□□ -0.35
LRRK1-202ENST00000525284 DNAJB1P25685 340 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms