RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 DLEU7Q6UYE1 221 aa4.87□□□□□ -1.63
HMGB1P40-201ENST00000525121 ZNF836Q6ZNA1 936 aa4.87□□□□□ -1.63
HMGB1P40-201ENST00000525121 NCCRP1Q6ZVX7 275 aaPredicted RBP4.87□□□□□ -1.63
HMGB1P40-201ENST00000525121 PLEKHM3Q6ZWE6 761 aa4.87□□□□□ -1.63
HMGB1P40-201ENST00000525121 PATL1Q86TB9 770 aaKnown RBP4.87□□□□□ -1.63
HMGB1P40-201ENST00000525121 SERPINA11Q86U17 422 aa4.87□□□□□ -1.63
HMGB1P40-201ENST00000525121 GTF2IRD2Q86UP8 949 aa4.87□□□□□ -1.63
HMGB1P40-201ENST00000525121 RETREG3Q86VR2 466 aa4.87□□□□□ -1.63
HMGB1P40-201ENST00000525121 RANBP3LQ86VV4 465 aaPredicted RBP4.87□□□□□ -1.63
HMGB1P40-201ENST00000525121 VRK2Q86Y07 508 aa4.87□□□□□ -1.63
HMGB1P40-201ENST00000525121 ARMC8Q8IUR7 673 aa4.87□□□□□ -1.63
HMGB1P40-201ENST00000525121 MSRB3Q8IXL7 192 aa4.87□□□□□ -1.63
HMGB1P40-201ENST00000525121 CADM2Q8N3J6 435 aa4.87□□□□□ -1.63
HMGB1P40-201ENST00000525121 RPRMLQ8N4K4 120 aa4.87□□□□□ -1.63
HMGB1P40-201ENST00000525121 MARVELD2Q8N4S9 558 aa4.87□□□□□ -1.63
HMGB1P40-201ENST00000525121 POU5F2Q8N7G0 328 aa4.87□□□□□ -1.63
HMGB1P40-201ENST00000525121 FAM71CQ8NEG0 241 aa4.87□□□□□ -1.63
HMGB1P40-201ENST00000525121 TNIP2Q8NFZ5 429 aa4.87□□□□□ -1.63
HMGB1P40-201ENST00000525121 OR10A6Q8NH74 314 aa4.87□□□□□ -1.63
HMGB1P40-201ENST00000525121 OR10D3Q8NH80 312 aa4.87□□□□□ -1.63
HMGB1P40-201ENST00000525121 LILRB4Q8NHJ6 448 aa4.87□□□□□ -1.63
HMGB1P40-201ENST00000525121 MBD3L2Q8NHZ7 208 aaPredicted RBP4.87□□□□□ -1.63
HMGB1P40-201ENST00000525121 RASSF5Q8WWW0 418 aa4.87□□□□□ -1.63
HMGB1P40-201ENST00000525121 CNOT9Q92600 299 aaKnown RBP4.87□□□□□ -1.63
HMGB1P40-201ENST00000525121 SLC35B4Q969S0 331 aa4.87□□□□□ -1.63
HMGB1P40-201ENST00000525121 CPNE4Q96A23 557 aaPredicted RBP4.87□□□□□ -1.63
HMGB1P40-201ENST00000525121 DDIT4LQ96D03 193 aa4.87□□□□□ -1.63
HMGB1P40-201ENST00000525121 RCN3Q96D15 328 aa4.87□□□□□ -1.63
HMGB1P40-201ENST00000525121 PSMG3-AS1Q96PY0 264 aa4.87□□□□□ -1.63
HMGB1P40-201ENST00000525121 HOPXQ9BPY8 73 aaPredicted RBP4.87□□□□□ -1.63
HMGB1P40-201ENST00000525121 TACO1Q9BSH4 297 aaKnown RBP4.87□□□□□ -1.63
HMGB1P40-201ENST00000525121 SFXN3Q9BWM7 321 aa4.87□□□□□ -1.63
HMGB1P40-201ENST00000525121 PINK1Q9BXM7 581 aa4.87□□□□□ -1.63
HMGB1P40-201ENST00000525121 KAT8Q9H7Z6 458 aaKnown RBP4.87□□□□□ -1.63
HMGB1P40-201ENST00000525121 SLC24A3Q9HC58 644 aa4.87□□□□□ -1.63
HMGB1P40-201ENST00000525121 FANCFQ9NPI8 374 aa4.87□□□□□ -1.63
HMGB1P40-201ENST00000525121 SLC52A3Q9NQ40 469 aa4.87□□□□□ -1.63
HMGB1P40-201ENST00000525121 NDE1Q9NXR1 346 aa4.87□□□□□ -1.63
HMGB1P40-201ENST00000525121 DNAJB12Q9NXW2 375 aaKnown RBP4.87□□□□□ -1.63
HMGB1P40-201ENST00000525121 CLCF1Q9UBD9 225 aa4.87□□□□□ -1.63
HMGB1P40-201ENST00000525121 ZNF629Q9UEG4 869 aaPredicted RBP4.87□□□□□ -1.63
HMGB1P40-201ENST00000525121 CHRNA9Q9UGM1 479 aa4.87□□□□□ -1.63
HMGB1P40-201ENST00000525121 KCNE5Q9UJ90 142 aa4.87□□□□□ -1.63
HMGB1P40-201ENST00000525121 RNF6Q9Y252 685 aa4.87□□□□□ -1.63
HMGB1P40-201ENST00000525121 EMC9Q9Y3B6 208 aa4.87□□□□□ -1.63
HMGB1P40-201ENST00000525121 CNTRLQ7Z7A1 2325 aa4.87□□□□□ -1.63
HMGB1P40-201ENST00000525121 CROCCQ5TZA2 2017 aa4.87□□□□□ -1.63
HMGB1P40-201ENST00000525121 SMG1Q96Q15 3661 aaKnown RBP4.86□□□□□ -1.63
HMGB1P40-201ENST00000525121 A0A0G2JNJ9 132 aa4.86□□□□□ -1.63
HMGB1P40-201ENST00000525121 PRAMEF27A3QJZ7 478 aa4.86□□□□□ -1.63
HMGB1P40-201ENST00000525121 CLDN24A6NM45 220 aa4.86□□□□□ -1.63
HMGB1P40-201ENST00000525121 FAM220BPB1ANY3 271 aa4.86□□□□□ -1.63
HMGB1P40-201ENST00000525121 B4DXG7 233 aa4.86□□□□□ -1.63
HMGB1P40-201ENST00000525121 FAAHO00519 579 aa4.86□□□□□ -1.63
HMGB1P40-201ENST00000525121 AP3D1O14617 1153 aa4.86□□□□□ -1.63
HMGB1P40-201ENST00000525121 ADAMDEC1O15204 470 aa4.86□□□□□ -1.63
HMGB1P40-201ENST00000525121 CXCL13O43927 109 aa4.86□□□□□ -1.63
HMGB1P40-201ENST00000525121 DNAJA2O60884 412 aa4.86□□□□□ -1.63
HMGB1P40-201ENST00000525121 RCBTB2O95199 551 aa4.86□□□□□ -1.63
HMGB1P40-201ENST00000525121 FAM107AO95990 144 aa4.86□□□□□ -1.63
HMGB1P40-201ENST00000525121 IL18BPO95998 194 aa4.86□□□□□ -1.63
HMGB1P40-201ENST00000525121 RNF224P0DH78 156 aa4.86□□□□□ -1.63
HMGB1P40-201ENST00000525121 CXCR1P25024 350 aa4.86□□□□□ -1.63
HMGB1P40-201ENST00000525121 GTF2E2P29084 291 aaKnown RBP4.86□□□□□ -1.63
HMGB1P40-201ENST00000525121 CEACAM8P31997 349 aaPredicted RBP4.86□□□□□ -1.63
HMGB1P40-201ENST00000525121 SLC1A3P43003 542 aa4.86□□□□□ -1.63
HMGB1P40-201ENST00000525121 CLK1P49759 484 aaKnown RBP4.86□□□□□ -1.63
HMGB1P40-201ENST00000525121 ASCL1P50553 236 aa4.86□□□□□ -1.63
HMGB1P40-201ENST00000525121 EPS8Q12929 822 aa4.86□□□□□ -1.63
HMGB1P40-201ENST00000525121 RNPS1Q15287 305 aaKnown RBP4.86□□□□□ -1.63
HMGB1P40-201ENST00000525121 TOMM34Q15785 309 aaPredicted RBP4.86□□□□□ -1.63
HMGB1P40-201ENST00000525121 VMACQ2NL98 169 aa4.86□□□□□ -1.63
HMGB1P40-201ENST00000525121 TMEM176BQ3YBM2 270 aaPredicted RBP4.86□□□□□ -1.63
HMGB1P40-201ENST00000525121 SYT14P1Q58G82 188 aa4.86□□□□□ -1.63
HMGB1P40-201ENST00000525121 RABL3Q5HYI8 236 aa4.86□□□□□ -1.63
HMGB1P40-201ENST00000525121 RTL6Q6ICC9 239 aa4.86□□□□□ -1.63
HMGB1P40-201ENST00000525121 WBP2NLQ6ICG8 309 aa4.86□□□□□ -1.63
HMGB1P40-201ENST00000525121 NANOGP8Q6NSW7 305 aa4.86□□□□□ -1.63
HMGB1P40-201ENST00000525121 DHRS4L2Q6PKH6 230 aa4.86□□□□□ -1.63
HMGB1P40-201ENST00000525121 NET1Q7Z628 596 aaPredicted RBP4.86□□□□□ -1.63
HMGB1P40-201ENST00000525121 GGNQ86UU5 652 aa4.86□□□□□ -1.63
HMGB1P40-201ENST00000525121 STK32CQ86UX6 486 aa4.86□□□□□ -1.63
HMGB1P40-201ENST00000525121 KIF18BQ86Y91 864 aa4.86□□□□□ -1.63
HMGB1P40-201ENST00000525121 CCDC71Q8IV32 467 aaPredicted RBP4.86□□□□□ -1.63
HMGB1P40-201ENST00000525121 ZZZ3Q8IYH5 903 aa4.86□□□□□ -1.63
HMGB1P40-201ENST00000525121 GCNT2Q8N0V5 402 aa4.86□□□□□ -1.63
HMGB1P40-201ENST00000525121 SLC43A2Q8N370 569 aa4.86□□□□□ -1.63
HMGB1P40-201ENST00000525121 CNEP1R1Q8N9A8 125 aa4.86□□□□□ -1.63
HMGB1P40-201ENST00000525121 C9orf106Q8NAJ2 232 aa4.86□□□□□ -1.63
HMGB1P40-201ENST00000525121 CCDC197Q8NCU1 140 aa4.86□□□□□ -1.63
HMGB1P40-201ENST00000525121 OR2T12Q8NG77 320 aa4.86□□□□□ -1.63
HMGB1P40-201ENST00000525121 RNF217Q8TC41 542 aa4.86□□□□□ -1.63
HMGB1P40-201ENST00000525121 POC1BQ8TC44 478 aa4.86□□□□□ -1.63
HMGB1P40-201ENST00000525121 LZICQ8WZA0 190 aa4.86□□□□□ -1.63
HMGB1P40-201ENST00000525121 PROX1Q92786 737 aa4.86□□□□□ -1.63
HMGB1P40-201ENST00000525121 OSTF1Q92882 214 aa4.86□□□□□ -1.63
HMGB1P40-201ENST00000525121 INTS12Q96CB8 462 aaKnown RBP4.86□□□□□ -1.63
HMGB1P40-201ENST00000525121 ZG16BQ96DA0 208 aa4.86□□□□□ -1.63
HMGB1P40-201ENST00000525121 OR5B2Q96R09 309 aa4.86□□□□□ -1.63
HMGB1P40-201ENST00000525121 UCN2Q96RP3 112 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms