RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 PNPT1Q8TCS8 783 aaKnown RBP16.57■□□□□ 0.24
CAPN1-203ENST00000525013 ABHD3Q8WU67 409 aa16.57■□□□□ 0.24
CAPN1-203ENST00000525013 TMEM234Q8WY98 164 aa16.57■□□□□ 0.24
CAPN1-203ENST00000525013 ST8SIA1Q92185 356 aa16.57■□□□□ 0.24
CAPN1-203ENST00000525013 ZNF75CPQ92670 426 aaPredicted RBP16.57■□□□□ 0.24
CAPN1-203ENST00000525013 ZG16BQ96DA0 208 aa16.57■□□□□ 0.24
CAPN1-203ENST00000525013 PIK3IP1Q96FE7 263 aa16.57■□□□□ 0.24
CAPN1-203ENST00000525013 QRSL1Q9H0R6 528 aaKnown RBP16.57■□□□□ 0.24
CAPN1-203ENST00000525013 FANCFQ9NPI8 374 aa16.57■□□□□ 0.24
CAPN1-203ENST00000525013 SLC35A3Q9Y2D2 325 aa16.57■□□□□ 0.24
CAPN1-203ENST00000525013 A0A1W2PNR3 127 aa16.56■□□□□ 0.24
CAPN1-203ENST00000525013 A0A1W2PPR1 153 aa16.56■□□□□ 0.24
CAPN1-203ENST00000525013 DIAPH2O60879 1101 aa16.56■□□□□ 0.24
CAPN1-203ENST00000525013 H6PDO95479 791 aa16.56■□□□□ 0.24
CAPN1-203ENST00000525013 GUSBP08236 651 aa16.56■□□□□ 0.24
CAPN1-203ENST00000525013 RYKP34925 604 aa16.56■□□□□ 0.24
CAPN1-203ENST00000525013 CHRNEQ04844 493 aa16.56■□□□□ 0.24
CAPN1-203ENST00000525013 MERTKQ12866 999 aa16.56■□□□□ 0.24
CAPN1-203ENST00000525013 PDCD4Q53EL6 469 aaKnown RBP16.56■□□□□ 0.24
CAPN1-203ENST00000525013 AGBL2Q5U5Z8 902 aa16.56■□□□□ 0.24
CAPN1-203ENST00000525013 DNAJC14Q6Y2X3 702 aaPredicted RBP16.56■□□□□ 0.24
CAPN1-203ENST00000525013 PIWIL2Q8TC59 973 aaKnown RBP16.56■□□□□ 0.24
CAPN1-203ENST00000525013 RNF128Q8TEB7 428 aa16.56■□□□□ 0.24
CAPN1-203ENST00000525013 OR5B2Q96R09 309 aa16.56■□□□□ 0.24
CAPN1-203ENST00000525013 SAP130Q9H0E3 1048 aa16.56■□□□□ 0.24
CAPN1-203ENST00000525013 CXXC4Q9H2H0 198 aa16.56■□□□□ 0.24
CAPN1-203ENST00000525013 COQ10BQ9H8M1 238 aa16.56■□□□□ 0.24
CAPN1-203ENST00000525013 SERINC1Q9NRX5 453 aa16.56■□□□□ 0.24
CAPN1-203ENST00000525013 FLNAP21333 2647 aaKnown RBP16.56■□□□□ 0.24
CAPN1-203ENST00000525013 IGHV3-15A0A0B4J1V0 119 aa16.55■□□□□ 0.24
CAPN1-203ENST00000525013 PRAMEF27A3QJZ7 478 aa16.55■□□□□ 0.24
CAPN1-203ENST00000525013 DEFB108AA8MXU0 73 aa16.55■□□□□ 0.24
CAPN1-203ENST00000525013 RFXANKO14593 260 aa16.55■□□□□ 0.24
CAPN1-203ENST00000525013 SIAH2O43255 324 aa16.55■□□□□ 0.24
CAPN1-203ENST00000525013 PRKD3O94806 890 aa16.55■□□□□ 0.24
CAPN1-203ENST00000525013 ATE1O95260 518 aa16.55■□□□□ 0.24
CAPN1-203ENST00000525013 IL6P05231 212 aa16.55■□□□□ 0.24
CAPN1-203ENST00000525013 CRYGSP22914 178 aa16.55■□□□□ 0.24
CAPN1-203ENST00000525013 PGM1P36871 562 aa16.55■□□□□ 0.24
CAPN1-203ENST00000525013 RAC3P60763 192 aa16.55■□□□□ 0.24
CAPN1-203ENST00000525013 SYPL1Q16563 259 aa16.55■□□□□ 0.24
CAPN1-203ENST00000525013 C3orf33Q6P1S2 294 aa16.55■□□□□ 0.24
CAPN1-203ENST00000525013 STAC2Q6ZMT1 411 aa16.55■□□□□ 0.24
CAPN1-203ENST00000525013 BEND4Q6ZU67 534 aa16.55■□□□□ 0.24
CAPN1-203ENST00000525013 MAVSQ7Z434 540 aa16.55■□□□□ 0.24
CAPN1-203ENST00000525013 TUSC5Q8IXB3 177 aa16.55■□□□□ 0.24
CAPN1-203ENST00000525013 ANKFN1Q8N957 763 aa16.55■□□□□ 0.24
CAPN1-203ENST00000525013 ZNF563Q8TA94 476 aa16.55■□□□□ 0.24
CAPN1-203ENST00000525013 OIT3Q8WWZ8 545 aa16.55■□□□□ 0.24
CAPN1-203ENST00000525013 MBD6Q96DN6 1003 aa16.55■□□□□ 0.24
CAPN1-203ENST00000525013 TRNT1Q96Q11 434 aaKnown RBP16.55■□□□□ 0.24
CAPN1-203ENST00000525013 ALPK1Q96QP1 1244 aa16.55■□□□□ 0.24
CAPN1-203ENST00000525013 OR52B2Q96RD2 323 aa16.55■□□□□ 0.24
CAPN1-203ENST00000525013 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.55■□□□□ 0.24
CAPN1-203ENST00000525013 ACER3Q9NUN7 267 aa16.55■□□□□ 0.24
CAPN1-203ENST00000525013 LIPT1Q9Y234 373 aa16.55■□□□□ 0.24
CAPN1-203ENST00000525013 DSCAMO60469 2012 aa16.55■□□□□ 0.24
CAPN1-203ENST00000525013 ETV2O00321 342 aaPredicted RBP16.54■□□□□ 0.24
CAPN1-203ENST00000525013 KLF11O14901 512 aa16.54■□□□□ 0.24
CAPN1-203ENST00000525013 UBDO15205 165 aa16.54■□□□□ 0.24
CAPN1-203ENST00000525013 DNAJA2O60884 412 aa16.54■□□□□ 0.24
CAPN1-203ENST00000525013 BCAS1O75363 584 aaPredicted RBP16.54■□□□□ 0.24
CAPN1-203ENST00000525013 KRT75O95678 551 aa16.54■□□□□ 0.24
CAPN1-203ENST00000525013 NR2F1P10589 423 aa16.54■□□□□ 0.24
CAPN1-203ENST00000525013 TFPIP10646 304 aa16.54■□□□□ 0.24
CAPN1-203ENST00000525013 ENPP1P22413 925 aa16.54■□□□□ 0.24
CAPN1-203ENST00000525013 KCNJ10P78508 379 aa16.54■□□□□ 0.24
CAPN1-203ENST00000525013 TXNL4AP83876 142 aaKnown RBP16.54■□□□□ 0.24
CAPN1-203ENST00000525013 GSTA3Q16772 222 aa16.54■□□□□ 0.24
CAPN1-203ENST00000525013 COX20Q5RI15 118 aa16.54■□□□□ 0.24
CAPN1-203ENST00000525013 C22orf34Q6ZV56 151 aa16.54■□□□□ 0.24
CAPN1-203ENST00000525013 PLEKHM3Q6ZWE6 761 aa16.54■□□□□ 0.24
CAPN1-203ENST00000525013 ARFGAP2Q8N6H7 521 aa16.54■□□□□ 0.24
CAPN1-203ENST00000525013 FAM71CQ8NEG0 241 aa16.54■□□□□ 0.24
CAPN1-203ENST00000525013 MAELQ96JY0 434 aaKnown RBP16.54■□□□□ 0.24
CAPN1-203ENST00000525013 KLHL13Q9P2N7 655 aa16.54■□□□□ 0.24
CAPN1-203ENST00000525013 USH1CQ9Y6N9 552 aa16.54■□□□□ 0.24
CAPN1-203ENST00000525013 CLDN24A6NM45 220 aa16.53■□□□□ 0.24
CAPN1-203ENST00000525013 ANP32DO95626 131 aa16.53■□□□□ 0.24
CAPN1-203ENST00000525013 YES1P07947 543 aa16.53■□□□□ 0.24
CAPN1-203ENST00000525013 CHRM4P08173 479 aa16.53■□□□□ 0.24
CAPN1-203ENST00000525013 NID1P14543 1247 aa16.53■□□□□ 0.24
CAPN1-203ENST00000525013 PPP3CBP16298 524 aa16.53■□□□□ 0.24
CAPN1-203ENST00000525013 PPP2R2AP63151 447 aa16.53■□□□□ 0.24
CAPN1-203ENST00000525013 DEFB113Q30KQ7 82 aa16.53■□□□□ 0.24
CAPN1-203ENST00000525013 AP1ARQ63HQ0 302 aa16.53■□□□□ 0.24
CAPN1-203ENST00000525013 NUFIP2Q7Z417 695 aaKnown RBP16.53■□□□□ 0.24
CAPN1-203ENST00000525013 SLC43A2Q8N370 569 aa16.53■□□□□ 0.24
CAPN1-203ENST00000525013 CNOT9Q92600 299 aaKnown RBP16.53■□□□□ 0.24
CAPN1-203ENST00000525013 SLC38A1Q9H2H9 487 aa16.53■□□□□ 0.24
CAPN1-203ENST00000525013 RMND5AQ9H871 391 aa16.53■□□□□ 0.24
CAPN1-203ENST00000525013 SDR39U1Q9NRG7 319 aaPredicted RBP16.53■□□□□ 0.24
CAPN1-203ENST00000525013 ZIM2Q9NZV7 527 aa16.53■□□□□ 0.24
CAPN1-203ENST00000525013 CD99P14209 185 aa16.52■□□□□ 0.24
CAPN1-203ENST00000525013 APOBEC1P41238 236 aaKnown RBP16.52■□□□□ 0.24
CAPN1-203ENST00000525013 POLR2JP52435 117 aaKnown RBP16.52■□□□□ 0.24
CAPN1-203ENST00000525013 RASGEF1BQ0VAM2 473 aa16.52■□□□□ 0.24
CAPN1-203ENST00000525013 ALKBH2Q6NS38 261 aa16.52■□□□□ 0.24
CAPN1-203ENST00000525013 LRRC74BQ6ZQY2 392 aa16.52■□□□□ 0.24
CAPN1-203ENST00000525013 TGIF2LYQ8IUE0 185 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms