RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 HARBI1Q96MB7 349 aa5.97□□□□□ -1.45
NEDD8-203ENST00000524927 JSRP1Q96MG2 331 aaPredicted RBP5.97□□□□□ -1.45
NEDD8-203ENST00000524927 COL21A1Q96P44 957 aa5.97□□□□□ -1.45
NEDD8-203ENST00000524927 IL17FQ96PD4 163 aa5.97□□□□□ -1.45
NEDD8-203ENST00000524927 USP28Q96RU2 1077 aa5.97□□□□□ -1.45
NEDD8-203ENST00000524927 PKP4Q99569 1192 aa5.97□□□□□ -1.45
NEDD8-203ENST00000524927 COPS8Q99627 209 aa5.97□□□□□ -1.45
NEDD8-203ENST00000524927 TSG101Q99816 390 aa5.97□□□□□ -1.45
NEDD8-203ENST00000524927 DHRS9Q9BPW9 319 aa5.97□□□□□ -1.45
NEDD8-203ENST00000524927 FICDQ9BVA6 458 aa5.97□□□□□ -1.45
NEDD8-203ENST00000524927 ZWILCHQ9H900 591 aa5.97□□□□□ -1.45
NEDD8-203ENST00000524927 LIN28AQ9H9Z2 209 aaKnown RBP5.97□□□□□ -1.45
NEDD8-203ENST00000524927 PROK2Q9HC23 129 aa5.97□□□□□ -1.45
NEDD8-203ENST00000524927 ANKHQ9HCJ1 492 aa5.97□□□□□ -1.45
NEDD8-203ENST00000524927 SIRT3Q9NTG7 399 aaPredicted RBP5.97□□□□□ -1.45
NEDD8-203ENST00000524927 UTP6Q9NYH9 597 aaKnown RBP5.97□□□□□ -1.45
NEDD8-203ENST00000524927 DLGAP4Q9Y2H0 992 aa5.97□□□□□ -1.45
NEDD8-203ENST00000524927 DNAH7Q8WXX0 4024 aa5.97□□□□□ -1.45
NEDD8-203ENST00000524927 LOC105371242A0A075B767 164 aa5.96□□□□□ -1.46
NEDD8-203ENST00000524927 IGLV5-39A0A0G2JS06 123 aa5.96□□□□□ -1.46
NEDD8-203ENST00000524927 DPRXA6NFQ7 191 aa5.96□□□□□ -1.46
NEDD8-203ENST00000524927 A8MZ25 164 aa5.96□□□□□ -1.46
NEDD8-203ENST00000524927 K7EIL1 84 aa5.96□□□□□ -1.46
NEDD8-203ENST00000524927 RAMP1O60894 148 aa5.96□□□□□ -1.46
NEDD8-203ENST00000524927 TRIM3O75382 744 aaPredicted RBP5.96□□□□□ -1.46
NEDD8-203ENST00000524927 MYO1DO94832 1006 aa5.96□□□□□ -1.46
NEDD8-203ENST00000524927 NDUFB4O95168 129 aa5.96□□□□□ -1.46
NEDD8-203ENST00000524927 PNPP00491 289 aa5.96□□□□□ -1.46
NEDD8-203ENST00000524927 SELEP16581 610 aa5.96□□□□□ -1.46
NEDD8-203ENST00000524927 IL1RNP18510 177 aa5.96□□□□□ -1.46
NEDD8-203ENST00000524927 PSMB1P20618 241 aaKnown RBP5.96□□□□□ -1.46
NEDD8-203ENST00000524927 PSMB5P28074 263 aa5.96□□□□□ -1.46
NEDD8-203ENST00000524927 CMPK1P30085 196 aa5.96□□□□□ -1.46
NEDD8-203ENST00000524927 RASSF2P50749 326 aa5.96□□□□□ -1.46
NEDD8-203ENST00000524927 GSCP56915 257 aaPredicted RBP5.96□□□□□ -1.46
NEDD8-203ENST00000524927 SIRPAP78324 504 aa5.96□□□□□ -1.46
NEDD8-203ENST00000524927 FUT7Q11130 342 aa5.96□□□□□ -1.46
NEDD8-203ENST00000524927 IRF3Q14653 427 aa5.96□□□□□ -1.46
NEDD8-203ENST00000524927 ZNF791Q3KP31 576 aaPredicted RBP5.96□□□□□ -1.46
NEDD8-203ENST00000524927 DMRTC1Q5HYR2 192 aa5.96□□□□□ -1.46
NEDD8-203ENST00000524927 PRAMEF20Q5VT98 475 aa5.96□□□□□ -1.46
NEDD8-203ENST00000524927 TRIM65Q6PJ69 517 aa5.96□□□□□ -1.46
NEDD8-203ENST00000524927 ENPP6Q6UWR7 440 aa5.96□□□□□ -1.46
NEDD8-203ENST00000524927 RAD9BQ6WBX8 426 aa5.96□□□□□ -1.46
NEDD8-203ENST00000524927 HSDL2Q6YN16 418 aa5.96□□□□□ -1.46
NEDD8-203ENST00000524927 Q6ZTK2 550 aa5.96□□□□□ -1.46
NEDD8-203ENST00000524927 P4HA3Q7Z4N8 544 aa5.96□□□□□ -1.46
NEDD8-203ENST00000524927 DCUN1D3Q8IWE4 304 aa5.96□□□□□ -1.46
NEDD8-203ENST00000524927 FAM71AQ8IYT1 594 aa5.96□□□□□ -1.46
NEDD8-203ENST00000524927 SCCPDHQ8NBX0 429 aa5.96□□□□□ -1.46
NEDD8-203ENST00000524927 STEAP2Q8NFT2 490 aa5.96□□□□□ -1.46
NEDD8-203ENST00000524927 OR4F5Q8NH21 305 aa5.96□□□□□ -1.46
NEDD8-203ENST00000524927 NANPQ8TBE9 248 aa5.96□□□□□ -1.46
NEDD8-203ENST00000524927 TMEM163Q8TC26 289 aa5.96□□□□□ -1.46
NEDD8-203ENST00000524927 ERGIC1Q969X5 290 aa5.96□□□□□ -1.46
NEDD8-203ENST00000524927 ULK4Q96C45 1275 aa5.96□□□□□ -1.46
NEDD8-203ENST00000524927 RHBDF1Q96CC6 855 aa5.96□□□□□ -1.46
NEDD8-203ENST00000524927 SAT2Q96F10 170 aaPredicted RBP5.96□□□□□ -1.46
NEDD8-203ENST00000524927 DUX5Q96PT3 197 aa5.96□□□□□ -1.46
NEDD8-203ENST00000524927 DOHHQ9BU89 302 aa5.96□□□□□ -1.46
NEDD8-203ENST00000524927 SNRNP25Q9BV90 132 aaKnown RBP5.96□□□□□ -1.46
NEDD8-203ENST00000524927 KRCC1Q9NPI7 259 aaPredicted RBP5.96□□□□□ -1.46
NEDD8-203ENST00000524927 ETNK2Q9NVF9 386 aa5.96□□□□□ -1.46
NEDD8-203ENST00000524927 NKIRAS2Q9NYR9 191 aa5.96□□□□□ -1.46
NEDD8-203ENST00000524927 HACD3Q9P035 362 aa5.96□□□□□ -1.46
NEDD8-203ENST00000524927 NENFQ9UMX5 172 aa5.96□□□□□ -1.46
NEDD8-203ENST00000524927 R3HDM2Q9Y2K5 976 aaKnown RBP5.96□□□□□ -1.46
NEDD8-203ENST00000524927 FAM90A8PA6NJQ4 464 aa5.95□□□□□ -1.46
NEDD8-203ENST00000524927 SIGLEC16A6NMB1 481 aa5.95□□□□□ -1.46
NEDD8-203ENST00000524927 A8MUA0 341 aa5.95□□□□□ -1.46
NEDD8-203ENST00000524927 MS4A18H0YCH9 400 aa5.95□□□□□ -1.46
NEDD8-203ENST00000524927 ITM2AO43736 263 aa5.95□□□□□ -1.46
NEDD8-203ENST00000524927 KIF5CO60282 957 aa5.95□□□□□ -1.46
NEDD8-203ENST00000524927 RDH16O75452 317 aa5.95□□□□□ -1.46
NEDD8-203ENST00000524927 PRKRAO75569 313 aaKnown RBP5.95□□□□□ -1.46
NEDD8-203ENST00000524927 SRP72O76094 671 aaKnown RBP5.95□□□□□ -1.46
NEDD8-203ENST00000524927 MSMBP08118 114 aa5.95□□□□□ -1.46
NEDD8-203ENST00000524927 FAM90A13PP0C7W8 464 aa5.95□□□□□ -1.46
NEDD8-203ENST00000524927 FAM90A24PP0C7X0 464 aa5.95□□□□□ -1.46
NEDD8-203ENST00000524927 OMGP23515 440 aa5.95□□□□□ -1.46
NEDD8-203ENST00000524927 CHATP28329 748 aa5.95□□□□□ -1.46
NEDD8-203ENST00000524927 KRTAP10-3P60369 221 aa5.95□□□□□ -1.46
NEDD8-203ENST00000524927 SRYQ05066 204 aa5.95□□□□□ -1.46
NEDD8-203ENST00000524927 STK38Q15208 465 aa5.95□□□□□ -1.46
NEDD8-203ENST00000524927 EIPR1Q53HC9 387 aa5.95□□□□□ -1.46
NEDD8-203ENST00000524927 ADNP2Q6IQ32 1131 aa5.95□□□□□ -1.46
NEDD8-203ENST00000524927 FAHD2BQ6P2I3 314 aaPredicted RBP5.95□□□□□ -1.46
NEDD8-203ENST00000524927 SBSNQ6UWP8 590 aa5.95□□□□□ -1.46
NEDD8-203ENST00000524927 ZNF367Q7RTV3 350 aa5.95□□□□□ -1.46
NEDD8-203ENST00000524927 LDB1Q86U70 411 aaPredicted RBP5.95□□□□□ -1.46
NEDD8-203ENST00000524927 PIANPQ8IYJ0 282 aa5.95□□□□□ -1.46
NEDD8-203ENST00000524927 DND1Q8IYX4 353 aaKnown RBP5.95□□□□□ -1.46
NEDD8-203ENST00000524927 SIGLECL1Q8N7X8 197 aa5.95□□□□□ -1.46
NEDD8-203ENST00000524927 LINC00301Q8NCQ3 95 aa5.95□□□□□ -1.46
NEDD8-203ENST00000524927 C7orf57Q8NEG2 295 aa5.95□□□□□ -1.46
NEDD8-203ENST00000524927 OR8K3Q8NH51 312 aa5.95□□□□□ -1.46
NEDD8-203ENST00000524927 OR14L1PQ8NHC6 308 aa5.95□□□□□ -1.46
NEDD8-203ENST00000524927 HSD17B8Q92506 261 aa5.95□□□□□ -1.46
NEDD8-203ENST00000524927 TAF15Q92804 592 aaKnown RBP eCLIP5.95□□□□□ -1.46
NEDD8-203ENST00000524927 RPL36ALQ969Q0 106 aaKnown RBP5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms