RNA–Protein interactions for RNA: ENST00000524393.5

RBBP4-215, Transcript of RB binding protein 4, chromatin remodeling factor, human

TSL 3

Gene RBBP4, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBBP4-215	ENST00000524393	INPP5K	Q9BT40	448 aa		11.25	□□□□□ -0.61
RBBP4-215	ENST00000524393	SAP130	Q9H0E3	1048 aa		11.25	□□□□□ -0.61
RBBP4-215	ENST00000524393	CXXC4	Q9H2H0	198 aa		11.25	□□□□□ -0.61
RBBP4-215	ENST00000524393	PLEKHF2	Q9H8W4	249 aa		11.25	□□□□□ -0.61
RBBP4-215	ENST00000524393	ZIM2	Q9NZV7	527 aa		11.25	□□□□□ -0.61
RBBP4-215	ENST00000524393	C6orf203	Q9P0P8	240 aa	Predicted RBP	11.25	□□□□□ -0.61
RBBP4-215	ENST00000524393	KLHL9	Q9P2J3	617 aa		11.25	□□□□□ -0.61
RBBP4-215	ENST00000524393	KLHL13	Q9P2N7	655 aa		11.25	□□□□□ -0.61
RBBP4-215	ENST00000524393	CSMD2	Q7Z408	3487 aa		11.24	□□□□□ -0.61
RBBP4-215	ENST00000524393	CENPVL1	A0A0U1RR11	272 aa		11.24	□□□□□ -0.61
RBBP4-215	ENST00000524393	TMEM247	A6NEH6	219 aa		11.24	□□□□□ -0.61
RBBP4-215	ENST00000524393	ETV2	O00321	342 aa	Predicted RBP	11.24	□□□□□ -0.61
RBBP4-215	ENST00000524393	EFNA2	O43921	213 aa		11.24	□□□□□ -0.61
RBBP4-215	ENST00000524393	DIAPH2	O60879	1101 aa		11.24	□□□□□ -0.61
RBBP4-215	ENST00000524393	ATE1	O95260	518 aa		11.24	□□□□□ -0.61
RBBP4-215	ENST00000524393	GSN	P06396	782 aa		11.24	□□□□□ -0.61
RBBP4-215	ENST00000524393	NR2F1	P10589	423 aa		11.24	□□□□□ -0.61
RBBP4-215	ENST00000524393	TFPI	P10646	304 aa		11.24	□□□□□ -0.61
RBBP4-215	ENST00000524393	UQCRB	P14927	111 aa		11.24	□□□□□ -0.61
RBBP4-215	ENST00000524393	ENPP1	P22413	925 aa		11.24	□□□□□ -0.61
RBBP4-215	ENST00000524393	FKBP2	P26885	142 aa	Known RBP	11.24	□□□□□ -0.61
RBBP4-215	ENST00000524393	IL12A	P29459	219 aa		11.24	□□□□□ -0.61
RBBP4-215	ENST00000524393	CCKAR	P32238	428 aa		11.24	□□□□□ -0.61
RBBP4-215	ENST00000524393	RYK	P34925	604 aa		11.24	□□□□□ -0.61
RBBP4-215	ENST00000524393	PGM1	P36871	562 aa		11.24	□□□□□ -0.61
RBBP4-215	ENST00000524393	APOBEC1	P41238	236 aa	Known RBP	11.24	□□□□□ -0.61
RBBP4-215	ENST00000524393	MAGEA8	P43361	318 aa		11.24	□□□□□ -0.61
RBBP4-215	ENST00000524393	SESN3	P58005	492 aa		11.24	□□□□□ -0.61
RBBP4-215	ENST00000524393	RAC3	P60763	192 aa		11.24	□□□□□ -0.61
RBBP4-215	ENST00000524393	STX1B	P61266	288 aa		11.24	□□□□□ -0.61
RBBP4-215	ENST00000524393	CSNK2A1	P68400	391 aa	Predicted RBP	11.24	□□□□□ -0.61
RBBP4-215	ENST00000524393	KCNJ10	P78508	379 aa		11.24	□□□□□ -0.61
RBBP4-215	ENST00000524393	CHRNE	Q04844	493 aa		11.24	□□□□□ -0.61
RBBP4-215	ENST00000524393	FUT5	Q11128	374 aa		11.24	□□□□□ -0.61
RBBP4-215	ENST00000524393	MAPK14	Q16539	360 aa		11.24	□□□□□ -0.61
RBBP4-215	ENST00000524393	DEFB113	Q30KQ7	82 aa		11.24	□□□□□ -0.61
RBBP4-215	ENST00000524393	SLC9B1	Q4ZJI4	515 aa		11.24	□□□□□ -0.61
RBBP4-215	ENST00000524393	ANKRD34A	Q69YU3	496 aa		11.24	□□□□□ -0.61
RBBP4-215	ENST00000524393	DNAJC14	Q6Y2X3	702 aa	Predicted RBP	11.24	□□□□□ -0.61
RBBP4-215	ENST00000524393	LRRC74B	Q6ZQY2	392 aa		11.24	□□□□□ -0.61
RBBP4-215	ENST00000524393	MSANTD1	Q6ZTZ1	278 aa		11.24	□□□□□ -0.61
RBBP4-215	ENST00000524393	CMIP	Q8IY22	773 aa		11.24	□□□□□ -0.61
RBBP4-215	ENST00000524393	MIER2	Q8N344	545 aa		11.24	□□□□□ -0.61
RBBP4-215	ENST00000524393	PNPT1	Q8TCS8	783 aa	Known RBP	11.24	□□□□□ -0.61
RBBP4-215	ENST00000524393	LRRC8C	Q8TDW0	803 aa		11.24	□□□□□ -0.61
RBBP4-215	ENST00000524393	DYDC1	Q8WWB3	177 aa		11.24	□□□□□ -0.61
RBBP4-215	ENST00000524393	PMM1	Q92871	262 aa		11.24	□□□□□ -0.61
RBBP4-215	ENST00000524393	ZHX1-C8orf76	Q96EF9	292 aa		11.24	□□□□□ -0.61
RBBP4-215	ENST00000524393	MARK4	Q96L34	752 aa		11.24	□□□□□ -0.61
RBBP4-215	ENST00000524393	SRXN1	Q9BYN0	137 aa		11.24	□□□□□ -0.61
RBBP4-215	ENST00000524393	QRSL1	Q9H0R6	528 aa	Known RBP	11.24	□□□□□ -0.61
RBBP4-215	ENST00000524393	COQ10B	Q9H8M1	238 aa		11.24	□□□□□ -0.61
RBBP4-215	ENST00000524393	CACYBP	Q9HB71	228 aa	Known RBP	11.24	□□□□□ -0.61
RBBP4-215	ENST00000524393	EXOSC3	Q9NQT5	275 aa	Known RBP	11.24	□□□□□ -0.61
RBBP4-215	ENST00000524393	ACER3	Q9NUN7	267 aa		11.24	□□□□□ -0.61
RBBP4-215	ENST00000524393	GPR52	Q9Y2T5	361 aa		11.24	□□□□□ -0.61
RBBP4-215	ENST00000524393	USH1C	Q9Y6N9	552 aa		11.24	□□□□□ -0.61
RBBP4-215	ENST00000524393	POLQ	O75417	2590 aa		11.23	□□□□□ -0.61
RBBP4-215	ENST00000524393	NUP214	P35658	2090 aa	Predicted RBP	11.23	□□□□□ -0.61
RBBP4-215	ENST00000524393	CSMD1	Q96PZ7	3565 aa		11.23	□□□□□ -0.61
RBBP4-215	ENST00000524393		A0A1W2PNR3	127 aa		11.23	□□□□□ -0.61
RBBP4-215	ENST00000524393	SULT2B1	O00204	365 aa		11.23	□□□□□ -0.61
RBBP4-215	ENST00000524393	POLR3G	O15318	223 aa	Predicted RBP	11.23	□□□□□ -0.61
RBBP4-215	ENST00000524393	DNAJA2	O60884	412 aa		11.23	□□□□□ -0.61
RBBP4-215	ENST00000524393	YES1	P07947	543 aa		11.23	□□□□□ -0.61
RBBP4-215	ENST00000524393	IL7R	P16871	459 aa		11.23	□□□□□ -0.61
RBBP4-215	ENST00000524393	CDKN2C	P42773	168 aa		11.23	□□□□□ -0.61
RBBP4-215	ENST00000524393	HTR3A	P46098	478 aa		11.23	□□□□□ -0.61
RBBP4-215	ENST00000524393	POLR2J	P52435	117 aa	Known RBP	11.23	□□□□□ -0.61
RBBP4-215	ENST00000524393	SYPL1	Q16563	259 aa		11.23	□□□□□ -0.61
RBBP4-215	ENST00000524393	SYT14P1	Q58G82	188 aa		11.23	□□□□□ -0.61
RBBP4-215	ENST00000524393	C6orf10	Q5SRN2	563 aa		11.23	□□□□□ -0.61
RBBP4-215	ENST00000524393	AP1AR	Q63HQ0	302 aa		11.23	□□□□□ -0.61
RBBP4-215	ENST00000524393	STAC2	Q6ZMT1	411 aa		11.23	□□□□□ -0.61
RBBP4-215	ENST00000524393	PLEKHM3	Q6ZWE6	761 aa		11.23	□□□□□ -0.61
RBBP4-215	ENST00000524393	GRINA	Q7Z429	371 aa		11.23	□□□□□ -0.61
RBBP4-215	ENST00000524393	TUSC5	Q8IXB3	177 aa		11.23	□□□□□ -0.61
RBBP4-215	ENST00000524393	ANKFN1	Q8N957	763 aa		11.23	□□□□□ -0.61
RBBP4-215	ENST00000524393	FAM71C	Q8NEG0	241 aa		11.23	□□□□□ -0.61
RBBP4-215	ENST00000524393	STEAP2	Q8NFT2	490 aa		11.23	□□□□□ -0.61
RBBP4-215	ENST00000524393	WDR60	Q8WVS4	1066 aa		11.23	□□□□□ -0.61
RBBP4-215	ENST00000524393	ITCH	Q96J02	903 aa		11.23	□□□□□ -0.61
RBBP4-215	ENST00000524393	ATP6V1G3	Q96LB4	118 aa		11.23	□□□□□ -0.61
RBBP4-215	ENST00000524393	C7orf26	Q96N11	449 aa		11.23	□□□□□ -0.61
RBBP4-215	ENST00000524393	HDHD5	Q9BXW7	423 aa		11.23	□□□□□ -0.61
RBBP4-215	ENST00000524393	OR10A4	Q9H209	315 aa		11.23	□□□□□ -0.61
RBBP4-215	ENST00000524393	MTHFD2L	Q9H903	347 aa	Predicted RBP	11.23	□□□□□ -0.61
RBBP4-215	ENST00000524393	SDR39U1	Q9NRG7	319 aa	Predicted RBP	11.23	□□□□□ -0.61
RBBP4-215	ENST00000524393	ARGLU1	Q9NWB6	273 aa	Predicted RBP	11.23	□□□□□ -0.61
RBBP4-215	ENST00000524393	THUMPD1	Q9NXG2	353 aa	Known RBP	11.23	□□□□□ -0.61
RBBP4-215	ENST00000524393	CALML5	Q9NZT1	146 aa		11.23	□□□□□ -0.61
RBBP4-215	ENST00000524393	P2RX2	Q9UBL9	471 aa		11.23	□□□□□ -0.61
RBBP4-215	ENST00000524393	CHRNA9	Q9UGM1	479 aa		11.23	□□□□□ -0.61
RBBP4-215	ENST00000524393	TACC2	O95359	2948 aa		11.22	□□□□□ -0.61
RBBP4-215	ENST00000524393	IGHV3-15	A0A0B4J1V0	119 aa		11.22	□□□□□ -0.61
RBBP4-215	ENST00000524393	AGAP5	A6NIR3	686 aa		11.22	□□□□□ -0.61
RBBP4-215	ENST00000524393	DEFB108A	A8MXU0	73 aa		11.22	□□□□□ -0.61
RBBP4-215	ENST00000524393	TGDS	O95455	350 aa		11.22	□□□□□ -0.61
RBBP4-215	ENST00000524393	DBI	P07108	87 aa	Known RBP	11.22	□□□□□ -0.61
RBBP4-215	ENST00000524393	ZCCHC18	P0CG32	403 aa		11.22	□□□□□ -0.61

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