RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, human

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-223	ENST00000524033	PTTG3P	Q9NZH4	202 aa		7.25	□□□□□ -1.25
SPIDR-223	ENST00000524033	SEC14L3	Q9UDX4	400 aa		7.25	□□□□□ -1.25
SPIDR-223	ENST00000524033	ADAM30	Q9UKF2	790 aa		7.25	□□□□□ -1.25
SPIDR-223	ENST00000524033	ELF5	Q9UKW6	265 aa	Predicted RBP	7.25	□□□□□ -1.25
SPIDR-223	ENST00000524033	SLC9A8	Q9Y2E8	581 aa		7.25	□□□□□ -1.25
SPIDR-223	ENST00000524033	GCN1	Q92616	2671 aa	Known RBP	7.24	□□□□□ -1.25
SPIDR-223	ENST00000524033	ATRX	P46100	2492 aa		7.24	□□□□□ -1.25
SPIDR-223	ENST00000524033	NUP210L	Q5VU65	1888 aa		7.24	□□□□□ -1.25
SPIDR-223	ENST00000524033		A0A0G2JK05	382 aa		7.24	□□□□□ -1.25
SPIDR-223	ENST00000524033		A0A0G2JPF8	293 aa		7.24	□□□□□ -1.25
SPIDR-223	ENST00000524033	LOC105371267	A0A1B0GV96	52 aa		7.24	□□□□□ -1.25
SPIDR-223	ENST00000524033	SNTN	A6NMZ2	147 aa		7.24	□□□□□ -1.25
SPIDR-223	ENST00000524033	WASHC1	A8K0Z3	465 aa		7.24	□□□□□ -1.25
SPIDR-223	ENST00000524033	C12orf71	A8MTZ7	269 aa		7.24	□□□□□ -1.25
SPIDR-223	ENST00000524033	HNRNPCL2	B2RXH8	293 aa		7.24	□□□□□ -1.25
SPIDR-223	ENST00000524033	HNRNPCL3	B7ZW38	293 aa		7.24	□□□□□ -1.25
SPIDR-223	ENST00000524033		K7ESM1	405 aa		7.24	□□□□□ -1.25
SPIDR-223	ENST00000524033	GTPBP1	O00178	669 aa	Known RBP	7.24	□□□□□ -1.25
SPIDR-223	ENST00000524033	RTCA	O00442	366 aa	Known RBP	7.24	□□□□□ -1.25
SPIDR-223	ENST00000524033	SURF4	O15260	269 aa		7.24	□□□□□ -1.25
SPIDR-223	ENST00000524033	NDUFS4	O43181	175 aa		7.24	□□□□□ -1.25
SPIDR-223	ENST00000524033	ARHGEF9	O43307	516 aa		7.24	□□□□□ -1.25
SPIDR-223	ENST00000524033	AKR7A2	O43488	359 aa		7.24	□□□□□ -1.25
SPIDR-223	ENST00000524033	ORC5	O43913	435 aa		7.24	□□□□□ -1.25
SPIDR-223	ENST00000524033	PLOD3	O60568	738 aa		7.24	□□□□□ -1.25
SPIDR-223	ENST00000524033	OR2B3	O76000	313 aa		7.24	□□□□□ -1.25
SPIDR-223	ENST00000524033	HLA-DPB1	P04440	258 aa		7.24	□□□□□ -1.25
SPIDR-223	ENST00000524033	ELFN1	P0C7U0	828 aa		7.24	□□□□□ -1.25
SPIDR-223	ENST00000524033	GIMD1	P0DJR0	217 aa		7.24	□□□□□ -1.25
SPIDR-223	ENST00000524033	HNRNPCL4	P0DMR1	293 aa		7.24	□□□□□ -1.25
SPIDR-223	ENST00000524033	MYF5	P13349	255 aa		7.24	□□□□□ -1.25
SPIDR-223	ENST00000524033	KEL	P23276	732 aa		7.24	□□□□□ -1.25
SPIDR-223	ENST00000524033	FPR3	P25089	353 aa		7.24	□□□□□ -1.25
SPIDR-223	ENST00000524033	SLC6A1	P30531	599 aa		7.24	□□□□□ -1.25
SPIDR-223	ENST00000524033	HTR1F	P30939	366 aa		7.24	□□□□□ -1.25
SPIDR-223	ENST00000524033	EIF2S3	P41091	472 aa	Known RBP	7.24	□□□□□ -1.25
SPIDR-223	ENST00000524033	MTNR1A	P48039	350 aa		7.24	□□□□□ -1.25
SPIDR-223	ENST00000524033	MTNR1B	P49286	362 aa		7.24	□□□□□ -1.25
SPIDR-223	ENST00000524033	AP2S1	P53680	142 aa	Predicted RBP	7.24	□□□□□ -1.25
SPIDR-223	ENST00000524033	DPT	Q07507	201 aa		7.24	□□□□□ -1.25
SPIDR-223	ENST00000524033	HSPB3	Q12988	150 aa		7.24	□□□□□ -1.25
SPIDR-223	ENST00000524033	RPA4	Q13156	261 aa		7.24	□□□□□ -1.25
SPIDR-223	ENST00000524033	GPR176	Q14439	515 aa		7.24	□□□□□ -1.25
SPIDR-223	ENST00000524033	POU4F3	Q15319	338 aa		7.24	□□□□□ -1.25
SPIDR-223	ENST00000524033	SNAPC1	Q16533	368 aa		7.24	□□□□□ -1.25
SPIDR-223	ENST00000524033	PGGHG	Q32M88	737 aa		7.24	□□□□□ -1.25
SPIDR-223	ENST00000524033	HACD4	Q5VWC8	232 aa		7.24	□□□□□ -1.25
SPIDR-223	ENST00000524033	MRM1	Q6IN84	353 aa	Known RBP	7.24	□□□□□ -1.25
SPIDR-223	ENST00000524033	SLC27A4	Q6P1M0	643 aa		7.24	□□□□□ -1.25
SPIDR-223	ENST00000524033	SMARCD3	Q6STE5	483 aa		7.24	□□□□□ -1.25
SPIDR-223	ENST00000524033	UTS2B	Q765I0	119 aa		7.24	□□□□□ -1.25
SPIDR-223	ENST00000524033	PARG	Q86W56	976 aa		7.24	□□□□□ -1.25
SPIDR-223	ENST00000524033	NR2C2AP	Q86WQ0	139 aa		7.24	□□□□□ -1.25
SPIDR-223	ENST00000524033	NUDT13	Q86X67	352 aa		7.24	□□□□□ -1.25
SPIDR-223	ENST00000524033	DCUN1D3	Q8IWE4	304 aa		7.24	□□□□□ -1.25
SPIDR-223	ENST00000524033	KLHL36	Q8N4N3	616 aa		7.24	□□□□□ -1.25
SPIDR-223	ENST00000524033	C19orf18	Q8NEA5	215 aa		7.24	□□□□□ -1.25
SPIDR-223	ENST00000524033	TEX47	Q8TBZ9	253 aa		7.24	□□□□□ -1.25
SPIDR-223	ENST00000524033	CXorf40A	Q8TE69	158 aa		7.24	□□□□□ -1.25
SPIDR-223	ENST00000524033	GATAD2B	Q8WXI9	593 aa		7.24	□□□□□ -1.25
SPIDR-223	ENST00000524033	ASB12	Q8WXK4	309 aa		7.24	□□□□□ -1.25
SPIDR-223	ENST00000524033	AKAP1	Q92667	903 aa	Known RBP eCLIP	7.24	□□□□□ -1.25
SPIDR-223	ENST00000524033	SNAPC3	Q92966	411 aa		7.24	□□□□□ -1.25
SPIDR-223	ENST00000524033	TMEM203	Q969S6	136 aa		7.24	□□□□□ -1.25
SPIDR-223	ENST00000524033	C1GALT1C1	Q96EU7	318 aa		7.24	□□□□□ -1.25
SPIDR-223	ENST00000524033	AMDHD1	Q96NU7	426 aa		7.24	□□□□□ -1.25
SPIDR-223	ENST00000524033	F2RL3	Q96RI0	385 aa		7.24	□□□□□ -1.25
SPIDR-223	ENST00000524033	DHRS9	Q9BPW9	319 aa		7.24	□□□□□ -1.25
SPIDR-223	ENST00000524033	AIF1L	Q9BQI0	150 aa		7.24	□□□□□ -1.25
SPIDR-223	ENST00000524033	RSRP1	Q9BUV0	290 aa		7.24	□□□□□ -1.25
SPIDR-223	ENST00000524033	PRRG3	Q9BZD7	231 aa		7.24	□□□□□ -1.25
SPIDR-223	ENST00000524033	TGIF2	Q9GZN2	237 aa		7.24	□□□□□ -1.25
SPIDR-223	ENST00000524033	FOLH1B	Q9HBA9	442 aa		7.24	□□□□□ -1.25
SPIDR-223	ENST00000524033	GALNT9	Q9HCQ5	603 aa		7.24	□□□□□ -1.25
SPIDR-223	ENST00000524033	EMC7	Q9NPA0	242 aa		7.24	□□□□□ -1.25
SPIDR-223	ENST00000524033	CYSLTR2	Q9NS75	346 aa		7.24	□□□□□ -1.25
SPIDR-223	ENST00000524033	TEX10	Q9NXF1	929 aa	Predicted RBP	7.24	□□□□□ -1.25
SPIDR-223	ENST00000524033	SLCO1C1	Q9NYB5	712 aa		7.24	□□□□□ -1.25
SPIDR-223	ENST00000524033	NLK	Q9UBE8	527 aa		7.24	□□□□□ -1.25
SPIDR-223	ENST00000524033	EIF3K	Q9UBQ5	218 aa	Known RBP	7.24	□□□□□ -1.25
SPIDR-223	ENST00000524033	ITM2B	Q9Y287	266 aa		7.24	□□□□□ -1.25
SPIDR-223	ENST00000524033	CHST2	Q9Y4C5	530 aa		7.24	□□□□□ -1.25
SPIDR-223	ENST00000524033	CSNK1G3	Q9Y6M4	447 aa		7.24	□□□□□ -1.25
SPIDR-223	ENST00000524033	CLCA3P	Q9Y6N3	262 aa		7.24	□□□□□ -1.25
SPIDR-223	ENST00000524033	CFAP46	Q8IYW2	2715 aa		7.24	□□□□□ -1.25
SPIDR-223	ENST00000524033	MGA	Q8IWI9	3026 aa		7.23	□□□□□ -1.25
SPIDR-223	ENST00000524033	ADAMTS9	Q9P2N4	1935 aa		7.23	□□□□□ -1.25
SPIDR-223	ENST00000524033	FAM240B	A0A1B0GVZ2	78 aa		7.23	□□□□□ -1.25
SPIDR-223	ENST00000524033	SMIM30	A4D0T7	59 aa		7.23	□□□□□ -1.25
SPIDR-223	ENST00000524033	CPED1	A4D0V7	1026 aa		7.23	□□□□□ -1.25
SPIDR-223	ENST00000524033	FAM181B	A6NEQ2	426 aa		7.23	□□□□□ -1.25
SPIDR-223	ENST00000524033	PCNX2	A6NKB5	2137 aa		7.23	□□□□□ -1.25
SPIDR-223	ENST00000524033	LEUTX	A8MZ59	168 aa		7.23	□□□□□ -1.25
SPIDR-223	ENST00000524033	INMT-MINDY4	F8WBC2	141 aa		7.23	□□□□□ -1.25
SPIDR-223	ENST00000524033	FAM229A	H3BQW9	127 aa		7.23	□□□□□ -1.25
SPIDR-223	ENST00000524033	CASK	O14936	926 aa		7.23	□□□□□ -1.25
SPIDR-223	ENST00000524033	CHST10	O43529	356 aa		7.23	□□□□□ -1.25
SPIDR-223	ENST00000524033	CHP2	O43745	196 aa		7.23	□□□□□ -1.25
SPIDR-223	ENST00000524033	AKAP8	O43823	692 aa	Known RBP	7.23	□□□□□ -1.25
SPIDR-223	ENST00000524033	VEGFD	O43915	354 aa		7.23	□□□□□ -1.25

Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms