RNA–Protein interactions for RNA: ENST00000523950.5

VEGFA-225, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 954 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-225ENST00000523950 ZNF607Q96SK3 696 aa11.31□□□□□ -0.6
VEGFA-225ENST00000523950 KLHDC3Q9BQ90 382 aa11.31□□□□□ -0.6
VEGFA-225ENST00000523950 CCDC106Q9BWC9 280 aa11.31□□□□□ -0.6
VEGFA-225ENST00000523950 KAT8Q9H7Z6 458 aaKnown RBP11.31□□□□□ -0.6
VEGFA-225ENST00000523950 EVA1AQ9H8M9 152 aa11.31□□□□□ -0.6
VEGFA-225ENST00000523950 SERINC1Q9NRX5 453 aa11.31□□□□□ -0.6
VEGFA-225ENST00000523950 ANGPT4Q9Y264 503 aa11.31□□□□□ -0.6
VEGFA-225ENST00000523950 AP3M1Q9Y2T2 418 aa11.31□□□□□ -0.6
VEGFA-225ENST00000523950 SPIN1Q9Y657 262 aaPredicted RBP11.31□□□□□ -0.6
VEGFA-225ENST00000523950 USP9XQ93008 2570 aaPredicted RBP11.31□□□□□ -0.6
VEGFA-225ENST00000523950 FLNCQ14315 2725 aa11.31□□□□□ -0.6
VEGFA-225ENST00000523950 MED12Q93074 2177 aa11.3□□□□□ -0.6
VEGFA-225ENST00000523950 LOC100653049A0A140TA62 436 aa11.3□□□□□ -0.6
VEGFA-225ENST00000523950 PRORSD1PA6NEY8 169 aa11.3□□□□□ -0.6
VEGFA-225ENST00000523950 CFAP73A6NFT4 308 aa11.3□□□□□ -0.6
VEGFA-225ENST00000523950 CLDN24A6NM45 220 aa11.3□□□□□ -0.6
VEGFA-225ENST00000523950 SHISA8B8ZZ34 492 aa11.3□□□□□ -0.6
VEGFA-225ENST00000523950 PRSS44E7EML9 344 aa11.3□□□□□ -0.6
VEGFA-225ENST00000523950 FXYD1O00168 92 aa11.3□□□□□ -0.6
VEGFA-225ENST00000523950 DVL2O14641 736 aa11.3□□□□□ -0.6
VEGFA-225ENST00000523950 ADAMDEC1O15204 470 aa11.3□□□□□ -0.6
VEGFA-225ENST00000523950 SERPINB7O75635 380 aa11.3□□□□□ -0.6
VEGFA-225ENST00000523950 KRT34O76011 436 aa11.3□□□□□ -0.6
VEGFA-225ENST00000523950 TOXO94900 526 aa11.3□□□□□ -0.6
VEGFA-225ENST00000523950 CRHP06850 196 aa11.3□□□□□ -0.6
VEGFA-225ENST00000523950 CTSSP25774 331 aa11.3□□□□□ -0.6
VEGFA-225ENST00000523950 PRKAR1BP31321 381 aa11.3□□□□□ -0.6
VEGFA-225ENST00000523950 OPRM1P35372 400 aa11.3□□□□□ -0.6
VEGFA-225ENST00000523950 APOBEC1P41238 236 aaKnown RBP11.3□□□□□ -0.6
VEGFA-225ENST00000523950 MAP2K6P52564 334 aa11.3□□□□□ -0.6
VEGFA-225ENST00000523950 SUCLG1P53597 346 aaKnown RBP11.3□□□□□ -0.6
VEGFA-225ENST00000523950 CLDN15P56746 228 aa11.3□□□□□ -0.6
VEGFA-225ENST00000523950 CLDN20P56880 219 aa11.3□□□□□ -0.6
VEGFA-225ENST00000523950 SESN3P58005 492 aa11.3□□□□□ -0.6
VEGFA-225ENST00000523950 MTPNP58546 118 aa11.3□□□□□ -0.6
VEGFA-225ENST00000523950 PLAURQ03405 335 aa11.3□□□□□ -0.6
VEGFA-225ENST00000523950 TOMM34Q15785 309 aaPredicted RBP11.3□□□□□ -0.6
VEGFA-225ENST00000523950 SGCBQ16585 318 aa11.3□□□□□ -0.6
VEGFA-225ENST00000523950 ZNF311Q5JNZ3 666 aa11.3□□□□□ -0.6
VEGFA-225ENST00000523950 RPS26P11Q5JNZ5 115 aaPredicted RBP11.3□□□□□ -0.6
VEGFA-225ENST00000523950 NANOGP8Q6NSW7 305 aa11.3□□□□□ -0.6
VEGFA-225ENST00000523950 ZNF836Q6ZNA1 936 aa11.3□□□□□ -0.6
VEGFA-225ENST00000523950 P4HA3Q7Z4N8 544 aa11.3□□□□□ -0.6
VEGFA-225ENST00000523950 ARPINQ7Z6K5 226 aa11.3□□□□□ -0.6
VEGFA-225ENST00000523950 MTDHQ86UE4 582 aaKnown RBP11.3□□□□□ -0.6
VEGFA-225ENST00000523950 VRK2Q86Y07 508 aa11.3□□□□□ -0.6
VEGFA-225ENST00000523950 LILRA2Q8N149 483 aa11.3□□□□□ -0.6
VEGFA-225ENST00000523950 C10orf111Q8N326 155 aa11.3□□□□□ -0.6
VEGFA-225ENST00000523950 TNIP2Q8NFZ5 429 aa11.3□□□□□ -0.6
VEGFA-225ENST00000523950 OR2V1Q8NHB1 315 aa11.3□□□□□ -0.6
VEGFA-225ENST00000523950 SLC25A43Q8WUT9 341 aaPredicted RBP11.3□□□□□ -0.6
VEGFA-225ENST00000523950 CNOT9Q92600 299 aaKnown RBP11.3□□□□□ -0.6
VEGFA-225ENST00000523950 CMTM5Q96DZ9 223 aa11.3□□□□□ -0.6
VEGFA-225ENST00000523950 ADGRG7Q96K78 797 aa11.3□□□□□ -0.6
VEGFA-225ENST00000523950 NPAS1Q99742 590 aa11.3□□□□□ -0.6
VEGFA-225ENST00000523950 MYLK2Q9H1R3 596 aa11.3□□□□□ -0.6
VEGFA-225ENST00000523950 NANOGQ9H9S0 305 aa11.3□□□□□ -0.6
VEGFA-225ENST00000523950 ARMCX1Q9P291 453 aa11.3□□□□□ -0.6
VEGFA-225ENST00000523950 KIAA1549Q9HCM3 1950 aa11.29□□□□□ -0.6
VEGFA-225ENST00000523950 SLC22A20A6NK97 555 aa11.29□□□□□ -0.6
VEGFA-225ENST00000523950 EIF1AYO14602 144 aaKnown RBP11.29□□□□□ -0.6
VEGFA-225ENST00000523950 BCAS1O75363 584 aaPredicted RBP11.29□□□□□ -0.6
VEGFA-225ENST00000523950 TMIGD3P0DMS9 266 aaPredicted RBP11.29□□□□□ -0.6
VEGFA-225ENST00000523950 COX4I1P13073 169 aa11.29□□□□□ -0.6
VEGFA-225ENST00000523950 HTR1EP28566 365 aa11.29□□□□□ -0.6
VEGFA-225ENST00000523950 PRDX6P30041 224 aa11.29□□□□□ -0.6
VEGFA-225ENST00000523950 EIF1AXP47813 144 aaKnown RBP11.29□□□□□ -0.6
VEGFA-225ENST00000523950 PCBP3P57721 371 aaKnown RBP11.29□□□□□ -0.6
VEGFA-225ENST00000523950 EPS8Q12929 822 aa11.29□□□□□ -0.6
VEGFA-225ENST00000523950 SELPLGQ14242 412 aa11.29□□□□□ -0.6
VEGFA-225ENST00000523950 CAPRIN1Q14444 709 aaKnown RBP11.29□□□□□ -0.6
VEGFA-225ENST00000523950 ADRM1Q16186 407 aa11.29□□□□□ -0.6
VEGFA-225ENST00000523950 CTU2Q2VPK5 515 aaKnown RBP11.29□□□□□ -0.6
VEGFA-225ENST00000523950 INTS11Q5TA45 600 aaKnown RBP11.29□□□□□ -0.6
VEGFA-225ENST00000523950 ERICH5Q6P6B1 374 aa11.29□□□□□ -0.6
VEGFA-225ENST00000523950 DHRS4L2Q6PKH6 230 aa11.29□□□□□ -0.6
VEGFA-225ENST00000523950 C6orf89Q6UWU4 347 aa11.29□□□□□ -0.6
VEGFA-225ENST00000523950 PLEKHM3Q6ZWE6 761 aa11.29□□□□□ -0.6
VEGFA-225ENST00000523950 PIGWQ7Z7B1 504 aa11.29□□□□□ -0.6
VEGFA-225ENST00000523950 HMGN2P46Q86SG4 172 aa11.29□□□□□ -0.6
VEGFA-225ENST00000523950 PTOV1Q86YD1 416 aa11.29□□□□□ -0.6
VEGFA-225ENST00000523950 CCDC71Q8IV32 467 aaPredicted RBP11.29□□□□□ -0.6
VEGFA-225ENST00000523950 C10orf67Q8IYJ2 551 aa11.29□□□□□ -0.6
VEGFA-225ENST00000523950 C9orf106Q8NAJ2 232 aa11.29□□□□□ -0.6
VEGFA-225ENST00000523950 CPNE4Q96A23 557 aaPredicted RBP11.29□□□□□ -0.6
VEGFA-225ENST00000523950 LRRC46Q96FV0 321 aa11.29□□□□□ -0.6
VEGFA-225ENST00000523950 SFXN3Q9BWM7 321 aa11.29□□□□□ -0.6
VEGFA-225ENST00000523950 PINK1Q9BXM7 581 aa11.29□□□□□ -0.6
VEGFA-225ENST00000523950 KCNJ16Q9NPI9 418 aa11.29□□□□□ -0.6
VEGFA-225ENST00000523950 TIGARQ9NQ88 270 aa11.29□□□□□ -0.6
VEGFA-225ENST00000523950 MCTS1Q9ULC4 181 aaKnown RBP11.29□□□□□ -0.6
VEGFA-225ENST00000523950 ARL2BPQ9Y2Y0 163 aa11.29□□□□□ -0.6
VEGFA-225ENST00000523950 ICE1Q9Y2F5 2266 aa11.29□□□□□ -0.6
VEGFA-225ENST00000523950 PCNX1Q96RV3 2341 aa11.29□□□□□ -0.6
VEGFA-225ENST00000523950 LRRK2Q5S007 2527 aa11.28□□□□□ -0.6
VEGFA-225ENST00000523950 KDM4EB2RXH2 506 aaPredicted RBP11.28□□□□□ -0.6
VEGFA-225ENST00000523950 DCTN3O75935 186 aa11.28□□□□□ -0.6
VEGFA-225ENST00000523950 SYNGR4O95473 234 aa11.28□□□□□ -0.6
VEGFA-225ENST00000523950 RYKP34925 604 aa11.28□□□□□ -0.6
VEGFA-225ENST00000523950 PCGF2P35227 344 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms