RNA–Protein interactions for RNA: ENST00000523896.1

PCM1-220, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-220ENST00000523896 HSFX3A0A1B0GWH4 333 aaPredicted RBP2.72□□□□□ -1.97
PCM1-220ENST00000523896 A0A1W2PNV4 684 aa2.72□□□□□ -1.97
PCM1-220ENST00000523896 ZFP92A6NM28 416 aa2.72□□□□□ -1.97
PCM1-220ENST00000523896 PPIAL4DF5H284 164 aa2.72□□□□□ -1.97
PCM1-220ENST00000523896 ANGPT2O15123 496 aa2.72□□□□□ -1.97
PCM1-220ENST00000523896 PEX11AO75192 247 aa2.72□□□□□ -1.97
PCM1-220ENST00000523896 UFL1O94874 794 aa2.72□□□□□ -1.97
PCM1-220ENST00000523896 LYPD3O95274 346 aa2.72□□□□□ -1.97
PCM1-220ENST00000523896 F10P00742 488 aa2.72□□□□□ -1.97
PCM1-220ENST00000523896 HSPB1P04792 205 aaKnown RBP2.72□□□□□ -1.97
PCM1-220ENST00000523896 CCDC166P0CW27 439 aa2.72□□□□□ -1.97
PCM1-220ENST00000523896 EPB41P11171 864 aaKnown RBP2.72□□□□□ -1.97
PCM1-220ENST00000523896 PGCP20142 388 aa2.72□□□□□ -1.97
PCM1-220ENST00000523896 SERPINA2P20848 420 aa2.72□□□□□ -1.97
PCM1-220ENST00000523896 NT5EP21589 574 aa2.72□□□□□ -1.97
PCM1-220ENST00000523896 ADORA2BP29275 332 aa2.72□□□□□ -1.97
PCM1-220ENST00000523896 KRTAP12-2P59991 146 aa2.72□□□□□ -1.97
PCM1-220ENST00000523896 NUCB2P80303 420 aa2.72□□□□□ -1.97
PCM1-220ENST00000523896 RAB40BQ12829 278 aa2.72□□□□□ -1.97
PCM1-220ENST00000523896 FRA10AC1Q70Z53 315 aa2.72□□□□□ -1.97
PCM1-220ENST00000523896 GET4Q7L5D6 327 aaPredicted RBP2.72□□□□□ -1.97
PCM1-220ENST00000523896 C11orf53Q8IXP5 236 aa2.72□□□□□ -1.97
PCM1-220ENST00000523896 OR2A12Q8NGT7 310 aa2.72□□□□□ -1.97
PCM1-220ENST00000523896 ZNF564Q8TBZ8 553 aaPredicted RBP2.72□□□□□ -1.97
PCM1-220ENST00000523896 RAET1EQ8TD07 263 aa2.72□□□□□ -1.97
PCM1-220ENST00000523896 AENQ8WTP8 325 aaKnown RBP2.72□□□□□ -1.97
PCM1-220ENST00000523896 SPRYD4Q8WW59 207 aaPredicted RBP2.72□□□□□ -1.97
PCM1-220ENST00000523896 OSTF1Q92882 214 aa2.72□□□□□ -1.97
PCM1-220ENST00000523896 SYAP1Q96A49 352 aaPredicted RBP2.72□□□□□ -1.97
PCM1-220ENST00000523896 FGGYQ96C11 551 aa2.72□□□□□ -1.97
PCM1-220ENST00000523896 HAVCR1Q96D42 359 aa2.72□□□□□ -1.97
PCM1-220ENST00000523896 DTNBP1Q96EV8 351 aa2.72□□□□□ -1.97
PCM1-220ENST00000523896 TPPP3Q9BW30 176 aa2.72□□□□□ -1.97
PCM1-220ENST00000523896 CRNKL1Q9BZJ0 848 aaKnown RBP2.72□□□□□ -1.97
PCM1-220ENST00000523896 EHD1Q9H4M9 534 aa2.72□□□□□ -1.97
PCM1-220ENST00000523896 SDAD1Q9NVU7 687 aaKnown RBP eCLIP2.72□□□□□ -1.97
PCM1-220ENST00000523896 OR1A1Q9P1Q5 309 aa2.72□□□□□ -1.97
PCM1-220ENST00000523896 XPO7Q9UIA9 1087 aaKnown RBP2.72□□□□□ -1.97
PCM1-220ENST00000523896 ATP6V0A2Q9Y487 856 aa2.72□□□□□ -1.97
PCM1-220ENST00000523896 MARF1Q9Y4F3 1742 aaKnown RBP2.72□□□□□ -1.97
PCM1-220ENST00000523896 PPIAL4AQ9Y536 164 aa2.72□□□□□ -1.97
PCM1-220ENST00000523896 EFCAB6Q5THR3 1501 aa2.72□□□□□ -1.97
PCM1-220ENST00000523896 ASXL1Q8IXJ9 1541 aa2.72□□□□□ -1.97
PCM1-220ENST00000523896 MAP3K5Q99683 1374 aa2.72□□□□□ -1.97
PCM1-220ENST00000523896 MROH1Q8NDA8 1641 aa2.71□□□□□ -1.97
PCM1-220ENST00000523896 ARHGEF28Q8N1W1 1705 aaKnown RBP2.71□□□□□ -1.98
PCM1-220ENST00000523896 SIPA1L2Q9P2F8 1722 aaPredicted RBP2.71□□□□□ -1.98
PCM1-220ENST00000523896 SAMD9LQ8IVG5 1584 aa2.71□□□□□ -1.98
PCM1-220ENST00000523896 MAST1Q9Y2H9 1570 aa2.71□□□□□ -1.98
PCM1-220ENST00000523896 UNC79Q9P2D8 2635 aa2.71□□□□□ -1.98
PCM1-220ENST00000523896 SMIM28A0A1B0GU29 152 aa2.71□□□□□ -1.98
PCM1-220ENST00000523896 PP2D1A8MPX8 630 aa2.71□□□□□ -1.98
PCM1-220ENST00000523896 HDAC3O15379 428 aa2.71□□□□□ -1.98
PCM1-220ENST00000523896 ZSCAN12O43309 604 aa2.71□□□□□ -1.98
PCM1-220ENST00000523896 LYPLA1O75608 230 aaPredicted RBP2.71□□□□□ -1.98
PCM1-220ENST00000523896 NEBLO76041 1014 aa2.71□□□□□ -1.98
PCM1-220ENST00000523896 GUCA1CO95843 209 aa2.71□□□□□ -1.98
PCM1-220ENST00000523896 SEMG1P04279 462 aa2.71□□□□□ -1.98
PCM1-220ENST00000523896 PCCBP05166 539 aa2.71□□□□□ -1.98
PCM1-220ENST00000523896 HSPA5P11021 654 aaKnown RBP2.71□□□□□ -1.98
PCM1-220ENST00000523896 KRT13P13646 458 aa2.71□□□□□ -1.98
PCM1-220ENST00000523896 CPN1P15169 458 aa2.71□□□□□ -1.98
PCM1-220ENST00000523896 IGLL1P15814 213 aa2.71□□□□□ -1.98
PCM1-220ENST00000523896 PSMB1P20618 241 aaKnown RBP2.71□□□□□ -1.98
PCM1-220ENST00000523896 DRD5P21918 477 aa2.71□□□□□ -1.98
PCM1-220ENST00000523896 ZBTB25P24278 435 aa2.71□□□□□ -1.98
PCM1-220ENST00000523896 NMT1P30419 496 aaKnown RBP2.71□□□□□ -1.98
PCM1-220ENST00000523896 CD80P33681 288 aa2.71□□□□□ -1.98
PCM1-220ENST00000523896 KIR2DS2P43631 304 aa2.71□□□□□ -1.98
PCM1-220ENST00000523896 SLC26A2P50443 739 aa2.71□□□□□ -1.98
PCM1-220ENST00000523896 NDPQ00604 133 aa2.71□□□□□ -1.98
PCM1-220ENST00000523896 EWSR1Q01844 656 aaKnown RBP eCLIP2.71□□□□□ -1.98
PCM1-220ENST00000523896 BCL2L1Q07817 233 aa2.71□□□□□ -1.98
PCM1-220ENST00000523896 ELP6Q0PNE2 266 aa2.71□□□□□ -1.98
PCM1-220ENST00000523896 TATDN3Q17R31 274 aa2.71□□□□□ -1.98
PCM1-220ENST00000523896 SLC5A12Q1EHB4 618 aa2.71□□□□□ -1.98
PCM1-220ENST00000523896 KRTAP13-3Q3SY46 172 aa2.71□□□□□ -1.98
PCM1-220ENST00000523896 SLC36A3Q495N2 470 aa2.71□□□□□ -1.98
PCM1-220ENST00000523896 TRPM8Q7Z2W7 1104 aa2.71□□□□□ -1.98
PCM1-220ENST00000523896 SKA3Q8IX90 412 aa2.71□□□□□ -1.98
PCM1-220ENST00000523896 TSGA13Q96PP4 275 aa2.71□□□□□ -1.98
PCM1-220ENST00000523896 MCHR1Q99705 422 aa2.71□□□□□ -1.98
PCM1-220ENST00000523896 SLC6A7Q99884 636 aa2.71□□□□□ -1.98
PCM1-220ENST00000523896 RIBC2Q9H4K1 309 aa2.71□□□□□ -1.98
PCM1-220ENST00000523896 MEAF6Q9HAF1 191 aa2.71□□□□□ -1.98
PCM1-220ENST00000523896 PAK1IP1Q9NWT1 392 aaPredicted RBP2.71□□□□□ -1.98
PCM1-220ENST00000523896 AIPL1Q9NZN9 384 aa2.71□□□□□ -1.98
PCM1-220ENST00000523896 ONECUT1Q9UBC0 465 aa2.71□□□□□ -1.98
PCM1-220ENST00000523896 ISY1Q9ULR0 285 aaKnown RBP2.71□□□□□ -1.98
PCM1-220ENST00000523896 ABCC5O15440 1437 aa2.7□□□□□ -1.98
PCM1-220ENST00000523896 MIA2Q96PC5 1412 aa2.7□□□□□ -1.98
PCM1-220ENST00000523896 IGHV7-81A0A0B4J1V7 117 aa2.7□□□□□ -1.98
PCM1-220ENST00000523896 A8MUI8 341 aa2.7□□□□□ -1.98
PCM1-220ENST00000523896 ZNF705EA8MWA4 302 aaPredicted RBP2.7□□□□□ -1.98
PCM1-220ENST00000523896 H3BMQ9 156 aa2.7□□□□□ -1.98
PCM1-220ENST00000523896 MSH4O15457 936 aa2.7□□□□□ -1.98
PCM1-220ENST00000523896 OR1F1O43749 312 aa2.7□□□□□ -1.98
PCM1-220ENST00000523896 TBL1XO60907 577 aa2.7□□□□□ -1.98
PCM1-220ENST00000523896 H2BFMP0C1H6 154 aa2.7□□□□□ -1.98
PCM1-220ENST00000523896 TSPY4P0CV99 314 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms