RNA–Protein interactions for RNA: ENST00000522900.5

SPIDR-220, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 692 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-220ENST00000522900 OR52B2Q96RD2 323 aa16.67■□□□□ 0.26
SPIDR-220ENST00000522900 TIGARQ9NQ88 270 aa16.67■□□□□ 0.26
SPIDR-220ENST00000522900 POLE3Q9NRF9 147 aa16.67■□□□□ 0.26
SPIDR-220ENST00000522900 SLC6A13Q9NSD5 602 aa16.67■□□□□ 0.26
SPIDR-220ENST00000522900 ZNF226Q9NYT6 803 aa16.67■□□□□ 0.26
SPIDR-220ENST00000522900 EDARQ9UNE0 448 aa16.67■□□□□ 0.26
SPIDR-220ENST00000522900 MAP1AP78559 2803 aaPredicted RBP16.67■□□□□ 0.26
SPIDR-220ENST00000522900 PRRC2AP48634 2157 aaKnown RBP16.67■□□□□ 0.26
SPIDR-220ENST00000522900 UQCRHLA0A096LP55 91 aa16.66■□□□□ 0.26
SPIDR-220ENST00000522900 GJE1A6NN92 205 aa16.66■□□□□ 0.26
SPIDR-220ENST00000522900 SLC22A3O75751 556 aa16.66■□□□□ 0.26
SPIDR-220ENST00000522900 H6PDO95479 791 aa16.66■□□□□ 0.26
SPIDR-220ENST00000522900 THBDP07204 575 aa16.66■□□□□ 0.26
SPIDR-220ENST00000522900 CHRM4P08173 479 aa16.66■□□□□ 0.26
SPIDR-220ENST00000522900 CD53P19397 219 aa16.66■□□□□ 0.26
SPIDR-220ENST00000522900 SELENBP1Q13228 472 aa16.66■□□□□ 0.26
SPIDR-220ENST00000522900 GTF2IRD2BQ6EKJ0 949 aa16.66■□□□□ 0.26
SPIDR-220ENST00000522900 GTF2IRD2Q86UP8 949 aa16.66■□□□□ 0.26
SPIDR-220ENST00000522900 ZNF619Q8N2I2 560 aa16.66■□□□□ 0.26
SPIDR-220ENST00000522900 FAM71CQ8NEG0 241 aa16.66■□□□□ 0.26
SPIDR-220ENST00000522900 PNPT1Q8TCS8 783 aaKnown RBP16.66■□□□□ 0.26
SPIDR-220ENST00000522900 REXO5Q96IC2 774 aaKnown RBP16.66■□□□□ 0.26
SPIDR-220ENST00000522900 HS3ST6Q96QI5 342 aa16.66■□□□□ 0.26
SPIDR-220ENST00000522900 ZBTB18Q99592 522 aa16.66■□□□□ 0.26
SPIDR-220ENST00000522900 ACER3Q9NUN7 267 aa16.66■□□□□ 0.26
SPIDR-220ENST00000522900 ADAM11O75078 769 aa16.65■□□□□ 0.26
SPIDR-220ENST00000522900 PGCP20142 388 aa16.65■□□□□ 0.26
SPIDR-220ENST00000522900 LOXP28300 417 aaPredicted RBP16.65■□□□□ 0.26
SPIDR-220ENST00000522900 RYKP34925 604 aa16.65■□□□□ 0.26
SPIDR-220ENST00000522900 DEFB113Q30KQ7 82 aa16.65■□□□□ 0.26
SPIDR-220ENST00000522900 PDCD4Q53EL6 469 aaKnown RBP16.65■□□□□ 0.26
SPIDR-220ENST00000522900 PLEKHM3Q6ZWE6 761 aa16.65■□□□□ 0.26
SPIDR-220ENST00000522900 FCRLAQ7L513 359 aa16.65■□□□□ 0.26
SPIDR-220ENST00000522900 PIWIL2Q8TC59 973 aaKnown RBP16.65■□□□□ 0.26
SPIDR-220ENST00000522900 ST8SIA1Q92185 356 aa16.65■□□□□ 0.26
SPIDR-220ENST00000522900 ALPK1Q96QP1 1244 aa16.65■□□□□ 0.26
SPIDR-220ENST00000522900 OR5B2Q96R09 309 aa16.65■□□□□ 0.26
SPIDR-220ENST00000522900 TMUB1Q9BVT8 246 aa16.65■□□□□ 0.26
SPIDR-220ENST00000522900 SLC38A1Q9H2H9 487 aa16.65■□□□□ 0.26
SPIDR-220ENST00000522900 ING1Q9UK53 422 aaPredicted RBP16.65■□□□□ 0.26
SPIDR-220ENST00000522900 KLF11O14901 512 aa16.64■□□□□ 0.25
SPIDR-220ENST00000522900 PRKD3O94806 890 aa16.64■□□□□ 0.25
SPIDR-220ENST00000522900 PABPC4LP0CB38 370 aaKnown RBP16.64■□□□□ 0.25
SPIDR-220ENST00000522900 IDO1P14902 403 aa16.64■□□□□ 0.25
SPIDR-220ENST00000522900 SLC7A1P30825 629 aa16.64■□□□□ 0.25
SPIDR-220ENST00000522900 RAC3P60763 192 aa16.64■□□□□ 0.25
SPIDR-220ENST00000522900 KCNJ10P78508 379 aa16.64■□□□□ 0.25
SPIDR-220ENST00000522900 MERTKQ12866 999 aa16.64■□□□□ 0.25
SPIDR-220ENST00000522900 RNPS1Q15287 305 aaKnown RBP16.64■□□□□ 0.25
SPIDR-220ENST00000522900 MAPK11Q15759 364 aa16.64■□□□□ 0.25
SPIDR-220ENST00000522900 TMEM201Q5SNT2 666 aa16.64■□□□□ 0.25
SPIDR-220ENST00000522900 AGBL2Q5U5Z8 902 aa16.64■□□□□ 0.25
SPIDR-220ENST00000522900 DNAJC14Q6Y2X3 702 aaPredicted RBP16.64■□□□□ 0.25
SPIDR-220ENST00000522900 BEND4Q6ZU67 534 aa16.64■□□□□ 0.25
SPIDR-220ENST00000522900 TGIF2LYQ8IUE0 185 aa16.64■□□□□ 0.25
SPIDR-220ENST00000522900 TRIML2Q8N7C3 387 aa16.64■□□□□ 0.25
SPIDR-220ENST00000522900 GLB1L3Q8NCI6 653 aaPredicted RBP16.64■□□□□ 0.25
SPIDR-220ENST00000522900 OR9I1Q8NGQ6 314 aa16.64■□□□□ 0.25
SPIDR-220ENST00000522900 CNOT9Q92600 299 aaKnown RBP16.64■□□□□ 0.25
SPIDR-220ENST00000522900 ZNF775Q96BV0 537 aaPredicted RBP16.64■□□□□ 0.25
SPIDR-220ENST00000522900 TRNT1Q96Q11 434 aaKnown RBP16.64■□□□□ 0.25
SPIDR-220ENST00000522900 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.64■□□□□ 0.25
SPIDR-220ENST00000522900 KLHL13Q9P2N7 655 aa16.64■□□□□ 0.25
SPIDR-220ENST00000522900 SLC35A3Q9Y2D2 325 aa16.64■□□□□ 0.25
SPIDR-220ENST00000522900 ITPR3Q14573 2671 aa16.63■□□□□ 0.25
SPIDR-220ENST00000522900 RFXANKO14593 260 aa16.63■□□□□ 0.25
SPIDR-220ENST00000522900 KLF4O43474 513 aa16.63■□□□□ 0.25
SPIDR-220ENST00000522900 IL6P05231 212 aa16.63■□□□□ 0.25
SPIDR-220ENST00000522900 YES1P07947 543 aa16.63■□□□□ 0.25
SPIDR-220ENST00000522900 CD99P14209 185 aa16.63■□□□□ 0.25
SPIDR-220ENST00000522900 MVDP53602 400 aa16.63■□□□□ 0.25
SPIDR-220ENST00000522900 TSC22D1Q15714 1073 aa16.63■□□□□ 0.25
SPIDR-220ENST00000522900 GSTA3Q16772 222 aa16.63■□□□□ 0.25
SPIDR-220ENST00000522900 GTDC1Q4AE62 458 aa16.63■□□□□ 0.25
SPIDR-220ENST00000522900 C3orf33Q6P1S2 294 aa16.63■□□□□ 0.25
SPIDR-220ENST00000522900 TFAP2EQ6VUC0 442 aa16.63■□□□□ 0.25
SPIDR-220ENST00000522900 TMEM234Q8WY98 164 aa16.63■□□□□ 0.25
SPIDR-220ENST00000522900 DNAJA3Q96EY1 480 aa16.63■□□□□ 0.25
SPIDR-220ENST00000522900 CCDC106Q9BWC9 280 aa16.63■□□□□ 0.25
SPIDR-220ENST00000522900 CTPS2Q9NRF8 586 aa16.63■□□□□ 0.25
SPIDR-220ENST00000522900 SDR39U1Q9NRG7 319 aaPredicted RBP16.63■□□□□ 0.25
SPIDR-220ENST00000522900 SERINC1Q9NRX5 453 aa16.63■□□□□ 0.25
SPIDR-220ENST00000522900 USH1CQ9Y6N9 552 aa16.63■□□□□ 0.25
SPIDR-220ENST00000522900 ABCA4P78363 2273 aa16.63■□□□□ 0.25
SPIDR-220ENST00000522900 AGAP5A6NIR3 686 aa16.62■□□□□ 0.25
SPIDR-220ENST00000522900 AP3D1O14617 1153 aa16.62■□□□□ 0.25
SPIDR-220ENST00000522900 SMAD9O15198 467 aaKnown RBP16.62■□□□□ 0.25
SPIDR-220ENST00000522900 UBDO15205 165 aa16.62■□□□□ 0.25
SPIDR-220ENST00000522900 DIAPH2O60879 1101 aa16.62■□□□□ 0.25
SPIDR-220ENST00000522900 ADAM8P78325 824 aa16.62■□□□□ 0.25
SPIDR-220ENST00000522900 HPCAP84074 193 aa16.62■□□□□ 0.25
SPIDR-220ENST00000522900 LRRC74AQ0VAA2 488 aa16.62■□□□□ 0.25
SPIDR-220ENST00000522900 EPGNQ6UW88 154 aa16.62■□□□□ 0.25
SPIDR-220ENST00000522900 LRRC74BQ6ZQY2 392 aa16.62■□□□□ 0.25
SPIDR-220ENST00000522900 STK32CQ86UX6 486 aa16.62■□□□□ 0.25
SPIDR-220ENST00000522900 CXorf67Q86X51 503 aaPredicted RBP16.62■□□□□ 0.25
SPIDR-220ENST00000522900 GABRG1Q8N1C3 465 aa16.62■□□□□ 0.25
SPIDR-220ENST00000522900 ARFGAP2Q8N6H7 521 aa16.62■□□□□ 0.25
SPIDR-220ENST00000522900 ZNF563Q8TA94 476 aa16.62■□□□□ 0.25
SPIDR-220ENST00000522900 OIT3Q8WWZ8 545 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms