RNA–Protein interactions for RNA: ENST00000522774.1

RAB11FIP1-204, Transcript of RAB11 family interacting protein 1, humanhuman

TSL 1 (best)

Gene RAB11FIP1, Length 3,078 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP1-204ENST00000522774 MAP3K3Q99759 626 aa9.92□□□□□ -0.82
RAB11FIP1-204ENST00000522774 COQ7Q99807 217 aa9.92□□□□□ -0.82
RAB11FIP1-204ENST00000522774 ZNF426Q9BUY5 554 aa9.92□□□□□ -0.82
RAB11FIP1-204ENST00000522774 HOXD1Q9GZZ0 328 aa9.92□□□□□ -0.82
RAB11FIP1-204ENST00000522774 PPIL3Q9H2H8 161 aaKnown RBP9.92□□□□□ -0.82
RAB11FIP1-204ENST00000522774 MCCC2Q9HCC0 563 aa9.92□□□□□ -0.82
RAB11FIP1-204ENST00000522774 POLHQ9Y253 713 aa9.92□□□□□ -0.82
RAB11FIP1-204ENST00000522774 CLDN16Q9Y5I7 305 aa9.92□□□□□ -0.82
RAB11FIP1-204ENST00000522774 PLA2G10O15496 165 aa9.91□□□□□ -0.82
RAB11FIP1-204ENST00000522774 HCN1O60741 890 aa9.91□□□□□ -0.82
RAB11FIP1-204ENST00000522774 IGLV3-19P01714 112 aa9.91□□□□□ -0.82
RAB11FIP1-204ENST00000522774 SLC2A5P22732 501 aa9.91□□□□□ -0.82
RAB11FIP1-204ENST00000522774 PPP3R1P63098 170 aa9.91□□□□□ -0.82
RAB11FIP1-204ENST00000522774 STX4Q12846 297 aa9.91□□□□□ -0.82
RAB11FIP1-204ENST00000522774 GALEQ14376 348 aa9.91□□□□□ -0.82
RAB11FIP1-204ENST00000522774 ZNF267Q14586 743 aaPredicted RBP9.91□□□□□ -0.82
RAB11FIP1-204ENST00000522774 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.91□□□□□ -0.822e-9■■□□□ 13
RAB11FIP1-204ENST00000522774 ALG10BQ5I7T1 473 aa9.91□□□□□ -0.82
RAB11FIP1-204ENST00000522774 RPL13AP3Q6NVV1 102 aa9.91□□□□□ -0.82
RAB11FIP1-204ENST00000522774 OAFQ86UD1 273 aa9.91□□□□□ -0.82
RAB11FIP1-204ENST00000522774 CADM2Q8N3J6 435 aa9.91□□□□□ -0.82
RAB11FIP1-204ENST00000522774 RCBTB1Q8NDN9 531 aa9.91□□□□□ -0.82
RAB11FIP1-204ENST00000522774 PMM1Q92871 262 aa9.91□□□□□ -0.82
RAB11FIP1-204ENST00000522774 SOSTQ9BQB4 213 aa9.91□□□□□ -0.82
RAB11FIP1-204ENST00000522774 WSB2Q9NYS7 404 aaPredicted RBP9.91□□□□□ -0.82
RAB11FIP1-204ENST00000522774 FBXL21Q9UKT6 434 aa9.91□□□□□ -0.82
RAB11FIP1-204ENST00000522774 ZMIZ1Q9ULJ6 1067 aa9.91□□□□□ -0.82
RAB11FIP1-204ENST00000522774 SLC35A3Q9Y2D2 325 aa9.91□□□□□ -0.82
RAB11FIP1-204ENST00000522774 HEATR5AQ86XA9 2040 aa9.91□□□□□ -0.82
RAB11FIP1-204ENST00000522774 TMEM131Q92545 1883 aa9.91□□□□□ -0.82
RAB11FIP1-204ENST00000522774 LRRN3E7EW58 273 aa9.91□□□□□ -0.82
RAB11FIP1-204ENST00000522774 PRKNO60260 465 aaPredicted RBP9.91□□□□□ -0.82
RAB11FIP1-204ENST00000522774 RGS9O75916 674 aaPredicted RBP9.91□□□□□ -0.82
RAB11FIP1-204ENST00000522774 RNH1P13489 461 aaKnown RBP9.91□□□□□ -0.82
RAB11FIP1-204ENST00000522774 MAOAP21397 527 aa9.91□□□□□ -0.82
RAB11FIP1-204ENST00000522774 E2F1Q01094 437 aa9.91□□□□□ -0.82
RAB11FIP1-204ENST00000522774 CRYZQ08257 329 aaKnown RBP9.91□□□□□ -0.82
RAB11FIP1-204ENST00000522774 ZNHIT3Q15649 155 aaPredicted RBP9.91□□□□□ -0.82
RAB11FIP1-204ENST00000522774 FAM27D1Q5T7N8 215 aa9.91□□□□□ -0.82
RAB11FIP1-204ENST00000522774 KIRREL2Q6UWL6 708 aa9.91□□□□□ -0.82
RAB11FIP1-204ENST00000522774 PARGQ86W56 976 aa9.91□□□□□ -0.82
RAB11FIP1-204ENST00000522774 GRAMD2AQ8IUY3 354 aa9.91□□□□□ -0.82
RAB11FIP1-204ENST00000522774 DEFB119Q8N690 84 aa9.91□□□□□ -0.82
RAB11FIP1-204ENST00000522774 Q8N9G6 341 aaPredicted RBP9.91□□□□□ -0.82
RAB11FIP1-204ENST00000522774 KLHDC7BQ96G42 594 aa9.91□□□□□ -0.82
RAB11FIP1-204ENST00000522774 LRRN3Q9H3W5 708 aa9.91□□□□□ -0.82
RAB11FIP1-204ENST00000522774 PPP1R3EQ9H7J1 279 aa9.91□□□□□ -0.82
RAB11FIP1-204ENST00000522774 ADGRL4Q9HBW9 690 aa9.91□□□□□ -0.82
RAB11FIP1-204ENST00000522774 GRIP1Q9Y3R0 1128 aa9.91□□□□□ -0.82
RAB11FIP1-204ENST00000522774 A0A1W2PPC4 97 aa9.91□□□□□ -0.82
RAB11FIP1-204ENST00000522774 SLC22A31A6NKX4 558 aa9.91□□□□□ -0.82
RAB11FIP1-204ENST00000522774 RIIAD1A6NNX1 92 aa9.91□□□□□ -0.82
RAB11FIP1-204ENST00000522774 SEC14L5O43304 696 aa9.91□□□□□ -0.82
RAB11FIP1-204ENST00000522774 CSF2P04141 144 aa9.91□□□□□ -0.82
RAB11FIP1-204ENST00000522774 SBK2P0C263 348 aa9.91□□□□□ -0.82
RAB11FIP1-204ENST00000522774 GAAP10253 952 aa9.91□□□□□ -0.82
RAB11FIP1-204ENST00000522774 CHRNB1P11230 501 aa9.91□□□□□ -0.82
RAB11FIP1-204ENST00000522774 BDH1Q02338 343 aa9.91□□□□□ -0.82
RAB11FIP1-204ENST00000522774 ZNF85Q03923 595 aa9.91□□□□□ -0.82
RAB11FIP1-204ENST00000522774 RSBN1Q5VWQ0 802 aaPredicted RBP9.91□□□□□ -0.82
RAB11FIP1-204ENST00000522774 ARL9Q6T311 187 aa9.91□□□□□ -0.82
RAB11FIP1-204ENST00000522774 RPTNQ6XPR3 784 aa9.91□□□□□ -0.82
RAB11FIP1-204ENST00000522774 RAB43Q86YS6 212 aa9.91□□□□□ -0.82
RAB11FIP1-204ENST00000522774 RFLNBQ8N5W9 214 aa9.91□□□□□ -0.82
RAB11FIP1-204ENST00000522774 OR5W2Q8NH69 310 aa9.91□□□□□ -0.82
RAB11FIP1-204ENST00000522774 OR4C6Q8NH72 309 aa9.91□□□□□ -0.82
RAB11FIP1-204ENST00000522774 RBM18Q96H35 190 aaKnown RBP9.91□□□□□ -0.82
RAB11FIP1-204ENST00000522774 TTTY10Q9BZA0 68 aa9.91□□□□□ -0.82
RAB11FIP1-204ENST00000522774 TPSD1Q9BZJ3 242 aa9.91□□□□□ -0.82
RAB11FIP1-204ENST00000522774 B3GAT2Q9NPZ5 323 aa9.91□□□□□ -0.82
RAB11FIP1-204ENST00000522774 LRIT1Q9P2V4 623 aa9.91□□□□□ -0.82
RAB11FIP1-204ENST00000522774 A8MV72 311 aaPredicted RBP9.9□□□□□ -0.82
RAB11FIP1-204ENST00000522774 PGDP52209 483 aa9.9□□□□□ -0.82
RAB11FIP1-204ENST00000522774 SSX6Q7RTT6 188 aa9.9□□□□□ -0.82
RAB11FIP1-204ENST00000522774 C17orf47Q8NEP4 570 aa9.9□□□□□ -0.82
RAB11FIP1-204ENST00000522774 OR6F1Q8NGZ6 308 aa9.9□□□□□ -0.82
RAB11FIP1-204ENST00000522774 KIAA1143Q96AT1 154 aaPredicted RBP9.9□□□□□ -0.82
RAB11FIP1-204ENST00000522774 TRIM2Q9C040 744 aa9.9□□□□□ -0.82
RAB11FIP1-204ENST00000522774 SLC22A4Q9H015 551 aa9.9□□□□□ -0.82
RAB11FIP1-204ENST00000522774 ERVK-19Q9WJR5 959 aa9.9□□□□□ -0.82
RAB11FIP1-204ENST00000522774 TMEM184BQ9Y519 407 aaPredicted RBP9.9□□□□□ -0.82
RAB11FIP1-204ENST00000522774 THADAQ6YHU6 1953 aa9.9□□□□□ -0.82
RAB11FIP1-204ENST00000522774 NPIPB9F8W1W9 429 aa9.9□□□□□ -0.83
RAB11FIP1-204ENST00000522774 CTNSO60931 367 aa9.9□□□□□ -0.83
RAB11FIP1-204ENST00000522774 CT45A8P0DMV1 189 aa9.9□□□□□ -0.83
RAB11FIP1-204ENST00000522774 CT45A9P0DMV2 189 aa9.9□□□□□ -0.83
RAB11FIP1-204ENST00000522774 SHC1P29353 583 aa9.9□□□□□ -0.83
RAB11FIP1-204ENST00000522774 GPR3P46089 330 aa9.9□□□□□ -0.83
RAB11FIP1-204ENST00000522774 EVX1P49640 407 aa9.9□□□□□ -0.83
RAB11FIP1-204ENST00000522774 HCCSP53701 268 aa9.9□□□□□ -0.83
RAB11FIP1-204ENST00000522774 OR12D2P58182 307 aa9.9□□□□□ -0.83
RAB11FIP1-204ENST00000522774 FGFBP1Q14512 234 aa9.9□□□□□ -0.83
RAB11FIP1-204ENST00000522774 CT45A2Q5DJT8 189 aa9.9□□□□□ -0.83
RAB11FIP1-204ENST00000522774 ZNF544Q6NX49 715 aa9.9□□□□□ -0.83
RAB11FIP1-204ENST00000522774 ARL14Q8N4G2 192 aa9.9□□□□□ -0.83
RAB11FIP1-204ENST00000522774 LRRC17Q8N6Y2 441 aa9.9□□□□□ -0.83
RAB11FIP1-204ENST00000522774 LSMEM1Q8N8F7 131 aa9.9□□□□□ -0.83
RAB11FIP1-204ENST00000522774 SDR9C7Q8NEX9 313 aa9.9□□□□□ -0.83
RAB11FIP1-204ENST00000522774 OR4C3Q8NH37 302 aa9.9□□□□□ -0.83
RAB11FIP1-204ENST00000522774 SMPDL3BQ92485 455 aa9.9□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms