RNA–Protein interactions for RNA: ENST00000520580.5

SREK1-208, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 2

Gene SREK1, Length 2,369 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-208ENST00000520580 TWIST1Q15672 202 aa3.03□□□□□ -1.92
SREK1-208ENST00000520580 ZIC1Q15915 447 aa3.03□□□□□ -1.92
SREK1-208ENST00000520580 KLHL38Q2WGJ6 581 aa3.03□□□□□ -1.92
SREK1-208ENST00000520580 SASS6Q6UVJ0 657 aa3.03□□□□□ -1.92
SREK1-208ENST00000520580 TPRA1Q86W33 373 aa3.03□□□□□ -1.92
SREK1-208ENST00000520580 CSGALNACT2Q8N6G5 542 aa3.03□□□□□ -1.92
SREK1-208ENST00000520580 TRIML2Q8N7C3 387 aa3.03□□□□□ -1.92
SREK1-208ENST00000520580 ASCC1Q8N9N2 400 aaKnown RBP3.03□□□□□ -1.92
SREK1-208ENST00000520580 SLC16A11Q8NCK7 471 aa3.03□□□□□ -1.92
SREK1-208ENST00000520580 OR4F6Q8NGB9 312 aa3.03□□□□□ -1.92
SREK1-208ENST00000520580 OR52H1Q8NGJ2 320 aa3.03□□□□□ -1.92
SREK1-208ENST00000520580 MARCH1Q8TCQ1 289 aa3.03□□□□□ -1.92
SREK1-208ENST00000520580 ZNF524Q96C55 264 aa3.03□□□□□ -1.92
SREK1-208ENST00000520580 C19orf60Q96EN9 201 aa3.03□□□□□ -1.92
SREK1-208ENST00000520580 MS4A14Q96JA4 679 aa3.03□□□□□ -1.92
SREK1-208ENST00000520580 CNN2Q99439 309 aaKnown RBP3.03□□□□□ -1.92
SREK1-208ENST00000520580 MRPL37Q9BZE1 423 aaKnown RBP3.03□□□□□ -1.92
SREK1-208ENST00000520580 ZNF446Q9NWS9 450 aa3.03□□□□□ -1.92
SREK1-208ENST00000520580 GRIN2DO15399 1336 aa3.03□□□□□ -1.92
SREK1-208ENST00000520580 ATP10AO60312 1499 aa3.03□□□□□ -1.93
SREK1-208ENST00000520580 A0A087WW49 117 aa3.02□□□□□ -1.93
SREK1-208ENST00000520580 RNF212BA8MTL3 300 aa3.02□□□□□ -1.93
SREK1-208ENST00000520580 C12orf71A8MTZ7 269 aa3.02□□□□□ -1.93
SREK1-208ENST00000520580 K7EQD1 137 aa3.02□□□□□ -1.93
SREK1-208ENST00000520580 SIVA1O15304 175 aa3.02□□□□□ -1.93
SREK1-208ENST00000520580 PRKYO43930 277 aa3.02□□□□□ -1.93
SREK1-208ENST00000520580 OR2F2O95006 317 aa3.02□□□□□ -1.93
SREK1-208ENST00000520580 NXPH4O95158 308 aa3.02□□□□□ -1.93
SREK1-208ENST00000520580 TSPAN13O95857 204 aa3.02□□□□□ -1.93
SREK1-208ENST00000520580 CLTAP09496 248 aa3.02□□□□□ -1.93
SREK1-208ENST00000520580 MYOGP15173 224 aa3.02□□□□□ -1.93
SREK1-208ENST00000520580 PAX1P15863 534 aa3.02□□□□□ -1.93
SREK1-208ENST00000520580 CD9P21926 228 aa3.02□□□□□ -1.93
SREK1-208ENST00000520580 IDSP22304 550 aa3.02□□□□□ -1.93
SREK1-208ENST00000520580 DCKP27707 260 aa3.02□□□□□ -1.93
SREK1-208ENST00000520580 CD38P28907 300 aa3.02□□□□□ -1.93
SREK1-208ENST00000520580 HSD17B2P37059 387 aa3.02□□□□□ -1.93
SREK1-208ENST00000520580 EMDP50402 254 aa3.02□□□□□ -1.93
SREK1-208ENST00000520580 PRKXP51817 358 aa3.02□□□□□ -1.93
SREK1-208ENST00000520580 CRYBA2P53672 197 aa3.02□□□□□ -1.93
SREK1-208ENST00000520580 MFAP2P55001 183 aa3.02□□□□□ -1.93
SREK1-208ENST00000520580 LINC00205P59089 165 aa3.02□□□□□ -1.93
SREK1-208ENST00000520580 RIPPLY1Q0D2K3 151 aa3.02□□□□□ -1.93
SREK1-208ENST00000520580 IL18R1Q13478 541 aa3.02□□□□□ -1.93
SREK1-208ENST00000520580 VPS26BQ4G0F5 336 aa3.02□□□□□ -1.93
SREK1-208ENST00000520580 MS4A13Q5J8X5 152 aa3.02□□□□□ -1.93
SREK1-208ENST00000520580 MUC21Q5SSG8 566 aa3.02□□□□□ -1.93
SREK1-208ENST00000520580 OR52W1Q6IF63 320 aa3.02□□□□□ -1.93
SREK1-208ENST00000520580 FAM53AQ6NSI3 398 aaPredicted RBP3.02□□□□□ -1.93
SREK1-208ENST00000520580 FAHD2BQ6P2I3 314 aaPredicted RBP3.02□□□□□ -1.93
SREK1-208ENST00000520580 STAC2Q6ZMT1 411 aa3.02□□□□□ -1.93
SREK1-208ENST00000520580 GCNT7Q6ZNI0 430 aa3.02□□□□□ -1.93
SREK1-208ENST00000520580 C9orf47Q6ZRZ4 202 aa3.02□□□□□ -1.93
SREK1-208ENST00000520580 VRK2Q86Y07 508 aa3.02□□□□□ -1.93
SREK1-208ENST00000520580 B3GNT7Q8NFL0 401 aa3.02□□□□□ -1.93
SREK1-208ENST00000520580 OR7G2Q8NG99 324 aa3.02□□□□□ -1.93
SREK1-208ENST00000520580 OR4C5Q8NGB2 326 aa3.02□□□□□ -1.93
SREK1-208ENST00000520580 ZNF519Q8TB69 540 aa3.02□□□□□ -1.93
SREK1-208ENST00000520580 GLYATL2Q8WU03 294 aa3.02□□□□□ -1.93
SREK1-208ENST00000520580 TRUB1Q8WWH5 349 aaKnown RBP3.02□□□□□ -1.93
SREK1-208ENST00000520580 UBE2E3Q969T4 207 aa3.02□□□□□ -1.93
SREK1-208ENST00000520580 NABP1Q96AH0 204 aa3.02□□□□□ -1.93
SREK1-208ENST00000520580 FAHD2AQ96GK7 314 aa3.02□□□□□ -1.93
SREK1-208ENST00000520580 CYP2S1Q96SQ9 504 aa3.02□□□□□ -1.93
SREK1-208ENST00000520580 MCRIP2Q9BUT9 160 aaKnown RBP3.02□□□□□ -1.93
SREK1-208ENST00000520580 CUTCQ9NTM9 273 aa3.02□□□□□ -1.93
SREK1-208ENST00000520580 MGAT4AQ9UM21 535 aa3.02□□□□□ -1.93
SREK1-208ENST00000520580 EIF4G1Q04637 1599 aaKnown RBP3.02□□□□□ -1.93
SREK1-208ENST00000520580 TRGV8A0A0C4DH27 118 aa3.02□□□□□ -1.93
SREK1-208ENST00000520580 IGHV3-38A0A0C4DH36 116 aa3.02□□□□□ -1.93
SREK1-208ENST00000520580 TCRBV9S1A1TA0A576 114 aa3.02□□□□□ -1.93
SREK1-208ENST00000520580 ZNF701M0R085 212 aaPredicted RBP3.02□□□□□ -1.93
SREK1-208ENST00000520580 PPP1R2P9O14990 202 aa3.02□□□□□ -1.93
SREK1-208ENST00000520580 OR10H3O60404 316 aa3.02□□□□□ -1.93
SREK1-208ENST00000520580 TOM1O60784 492 aa3.02□□□□□ -1.93
SREK1-208ENST00000520580 ALPLP05186 524 aa3.02□□□□□ -1.93
SREK1-208ENST00000520580 PRSS56P0CW18 603 aa3.02□□□□□ -1.93
SREK1-208ENST00000520580 ZNF10P21506 573 aaPredicted RBP3.02□□□□□ -1.93
SREK1-208ENST00000520580 PRKACGP22612 351 aa3.02□□□□□ -1.93
SREK1-208ENST00000520580 HMGCLP35914 325 aa3.02□□□□□ -1.93
SREK1-208ENST00000520580 ACVR1BP36896 505 aa3.02□□□□□ -1.93
SREK1-208ENST00000520580 CRYBB2P43320 205 aa3.02□□□□□ -1.93
SREK1-208ENST00000520580 CSRP3P50461 194 aa3.02□□□□□ -1.93
SREK1-208ENST00000520580 INHBEP58166 350 aa3.02□□□□□ -1.93
SREK1-208ENST00000520580 KCNJ2P63252 427 aa3.02□□□□□ -1.93
SREK1-208ENST00000520580 ILF3Q12906 894 aaKnown RBP eCLIP3.02□□□□□ -1.93
SREK1-208ENST00000520580 ZNF154Q13106 437 aa3.02□□□□□ -1.93
SREK1-208ENST00000520580 NDUFA9Q16795 377 aa3.02□□□□□ -1.93
SREK1-208ENST00000520580 MTHFSDQ2M296 383 aaKnown RBP3.02□□□□□ -1.93
SREK1-208ENST00000520580 HNRNPA1L2Q32P51 320 aaKnown RBP3.02□□□□□ -1.93
SREK1-208ENST00000520580 NKAIN1Q4KMZ8 207 aa3.02□□□□□ -1.93
SREK1-208ENST00000520580 VWA2Q5GFL6 755 aa3.02□□□□□ -1.93
SREK1-208ENST00000520580 ZNF57Q68EA5 555 aaPredicted RBP3.02□□□□□ -1.93
SREK1-208ENST00000520580 SLC35E4Q6ICL7 350 aa3.02□□□□□ -1.93
SREK1-208ENST00000520580 PWWP2BQ6NUJ5 590 aa3.02□□□□□ -1.93
SREK1-208ENST00000520580 C19orf48Q6RUI8 117 aa3.02□□□□□ -1.93
SREK1-208ENST00000520580 REG3GQ6UW15 175 aa3.02□□□□□ -1.93
SREK1-208ENST00000520580 LCLAT1Q6UWP7 414 aa3.02□□□□□ -1.93
SREK1-208ENST00000520580 MTURNQ8N3F0 131 aa3.02□□□□□ -1.93
SREK1-208ENST00000520580 PQLC3Q8N755 202 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms