RNA–Protein interactions for RNA: ENST00000520520.1

CTNNA1-223, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 484 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-223ENST00000520520 PAQR6Q6TCH4 344 aa8.01□□□□□ -1.13
CTNNA1-223ENST00000520520 PCSK4Q6UW60 755 aa8.01□□□□□ -1.13
CTNNA1-223ENST00000520520 WASH2PQ6VEQ5 465 aa8.01□□□□□ -1.13
CTNNA1-223ENST00000520520 ZNF782Q6ZMW2 699 aaPredicted RBP8.01□□□□□ -1.13
CTNNA1-223ENST00000520520 ZNF620Q6ZNG0 422 aa8.01□□□□□ -1.13
CTNNA1-223ENST00000520520 KANSL1Q7Z3B3 1105 aa8.01□□□□□ -1.13
CTNNA1-223ENST00000520520 C11orf96Q7Z7L8 435 aa8.01□□□□□ -1.13
CTNNA1-223ENST00000520520 KIF18BQ86Y91 864 aa8.01□□□□□ -1.13
CTNNA1-223ENST00000520520 CDK20Q8IZL9 346 aa8.01□□□□□ -1.13
CTNNA1-223ENST00000520520 LRRC17Q8N6Y2 441 aa8.01□□□□□ -1.13
CTNNA1-223ENST00000520520 NUP43Q8NFH3 380 aa8.01□□□□□ -1.13
CTNNA1-223ENST00000520520 OR5D16Q8NGK9 328 aa8.01□□□□□ -1.13
CTNNA1-223ENST00000520520 FANK1Q8TC84 345 aa8.01□□□□□ -1.13
CTNNA1-223ENST00000520520 BRIX1Q8TDN6 353 aaKnown RBP8.01□□□□□ -1.13
CTNNA1-223ENST00000520520 ADAMTS15Q8TE58 950 aa8.01□□□□□ -1.13
CTNNA1-223ENST00000520520 KCNE4Q8WWG9 221 aa8.01□□□□□ -1.13
CTNNA1-223ENST00000520520 DIO2Q92813 273 aa8.01□□□□□ -1.13
CTNNA1-223ENST00000520520 PMM1Q92871 262 aa8.01□□□□□ -1.13
CTNNA1-223ENST00000520520 RFT1Q96AA3 541 aa8.01□□□□□ -1.13
CTNNA1-223ENST00000520520 FAM46AQ96IP4 442 aaKnown RBP8.01□□□□□ -1.13
CTNNA1-223ENST00000520520 PRAP1Q96NZ9 151 aa8.01□□□□□ -1.13
CTNNA1-223ENST00000520520 OR7D2Q96RA2 312 aa8.01□□□□□ -1.13
CTNNA1-223ENST00000520520 FERD3LQ96RJ6 166 aa8.01□□□□□ -1.13
CTNNA1-223ENST00000520520 MARVELD1Q9BSK0 173 aa8.01□□□□□ -1.13
CTNNA1-223ENST00000520520 TMED9Q9BVK6 235 aa8.01□□□□□ -1.13
CTNNA1-223ENST00000520520 C1QTNF7Q9BXJ2 289 aa8.01□□□□□ -1.13
CTNNA1-223ENST00000520520 SEMA4CQ9C0C4 833 aa8.01□□□□□ -1.13
CTNNA1-223ENST00000520520 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.01□□□□□ -1.13
CTNNA1-223ENST00000520520 PIGUQ9H490 435 aa8.01□□□□□ -1.13
CTNNA1-223ENST00000520520 EGLN3Q9H6Z9 239 aa8.01□□□□□ -1.13
CTNNA1-223ENST00000520520 WDR26Q9H7D7 661 aa8.01□□□□□ -1.13
CTNNA1-223ENST00000520520 MRPS30Q9NP92 439 aaKnown RBP8.01□□□□□ -1.13
CTNNA1-223ENST00000520520 ACOXLQ9NUZ1 547 aa8.01□□□□□ -1.13
CTNNA1-223ENST00000520520 EMC3Q9P0I2 261 aa8.01□□□□□ -1.13
CTNNA1-223ENST00000520520 PTGFRNQ9P2B2 879 aa8.01□□□□□ -1.13
CTNNA1-223ENST00000520520 SATB2Q9UPW6 733 aa8.01□□□□□ -1.13
CTNNA1-223ENST00000520520 CARD8Q9Y2G2 431 aa8.01□□□□□ -1.13
CTNNA1-223ENST00000520520 TENM4Q6N022 2769 aa8□□□□□ -1.13
CTNNA1-223ENST00000520520 A0A087WUU8 490 aa8□□□□□ -1.13
CTNNA1-223ENST00000520520 LRIT2A6NDA9 550 aa8□□□□□ -1.13
CTNNA1-223ENST00000520520 ANKRD61A6NGH8 418 aa8□□□□□ -1.13
CTNNA1-223ENST00000520520 UNC119BA6NIH7 251 aa8□□□□□ -1.13
CTNNA1-223ENST00000520520 SLC22A31A6NKX4 558 aa8□□□□□ -1.13
CTNNA1-223ENST00000520520 CPSF4LA6NMK7 179 aaKnown RBP8□□□□□ -1.13
CTNNA1-223ENST00000520520 NOTOA8MTQ0 251 aa8□□□□□ -1.13
CTNNA1-223ENST00000520520 A8MV72 311 aaPredicted RBP8□□□□□ -1.13
CTNNA1-223ENST00000520520 ISM1B1AKI9 464 aa8□□□□□ -1.13
CTNNA1-223ENST00000520520 INMT-MINDY4F8WBC2 141 aa8□□□□□ -1.13
CTNNA1-223ENST00000520520 K7ESM1 405 aa8□□□□□ -1.13
CTNNA1-223ENST00000520520 RNF13O43567 381 aa8□□□□□ -1.13
CTNNA1-223ENST00000520520 HPGDSO60760 199 aa8□□□□□ -1.13
CTNNA1-223ENST00000520520 B4GALT2O60909 372 aa8□□□□□ -1.13
CTNNA1-223ENST00000520520 TMEM127O75204 238 aa8□□□□□ -1.13
CTNNA1-223ENST00000520520 SEMA7AO75326 666 aa8□□□□□ -1.13
CTNNA1-223ENST00000520520 RCBTB2O95199 551 aa8□□□□□ -1.13
CTNNA1-223ENST00000520520 HMGN2P05204 90 aaKnown RBP8□□□□□ -1.13
CTNNA1-223ENST00000520520 CLEC2LP0C7M8 214 aa8□□□□□ -1.13
CTNNA1-223ENST00000520520 ACP5P13686 325 aa8□□□□□ -1.13
CTNNA1-223ENST00000520520 ARSBP15848 533 aa8□□□□□ -1.13
CTNNA1-223ENST00000520520 BMP7P18075 431 aa8□□□□□ -1.13
CTNNA1-223ENST00000520520 C4BPBP20851 252 aa8□□□□□ -1.13
CTNNA1-223ENST00000520520 ALAS2P22557 587 aa8□□□□□ -1.13
CTNNA1-223ENST00000520520 AKT2P31751 481 aa8□□□□□ -1.13
CTNNA1-223ENST00000520520 OMPP47874 163 aa8□□□□□ -1.13
CTNNA1-223ENST00000520520 CLCNKAP51800 687 aa8□□□□□ -1.13
CTNNA1-223ENST00000520520 GAS1P54826 345 aa8□□□□□ -1.13
CTNNA1-223ENST00000520520 E2F1Q01094 437 aa8□□□□□ -1.13
CTNNA1-223ENST00000520520 BTBD16Q32M84 506 aa8□□□□□ -1.13
CTNNA1-223ENST00000520520 C4orf48Q5BLP8 95 aa8□□□□□ -1.13
CTNNA1-223ENST00000520520 CCNJQ5T5M9 372 aa8□□□□□ -1.13
CTNNA1-223ENST00000520520 OR2G6Q5TZ20 316 aa8□□□□□ -1.13
CTNNA1-223ENST00000520520 ZNF322Q6U7Q0 402 aaPredicted RBP8□□□□□ -1.13
CTNNA1-223ENST00000520520 TMEM107Q6UX40 140 aa8□□□□□ -1.13
CTNNA1-223ENST00000520520 RNF113BQ8IZP6 322 aaKnown RBP8□□□□□ -1.13
CTNNA1-223ENST00000520520 ACBD7Q8N6N7 88 aa8□□□□□ -1.13
CTNNA1-223ENST00000520520 ARIH2OSQ8N7S6 290 aa8□□□□□ -1.13
CTNNA1-223ENST00000520520 YIPF7Q8N8F6 280 aa8□□□□□ -1.13
CTNNA1-223ENST00000520520 SYT14Q8NB59 555 aa8□□□□□ -1.13
CTNNA1-223ENST00000520520 MFSD9Q8NBP5 474 aa8□□□□□ -1.13
CTNNA1-223ENST00000520520 TMEM145Q8NBT3 493 aa8□□□□□ -1.13
CTNNA1-223ENST00000520520 OR5M3Q8NGP4 307 aa8□□□□□ -1.13
CTNNA1-223ENST00000520520 OR4C6Q8NH72 309 aa8□□□□□ -1.13
CTNNA1-223ENST00000520520 IFI44Q8TCB0 444 aa8□□□□□ -1.13
CTNNA1-223ENST00000520520 SLC2A12Q8TD20 617 aa8□□□□□ -1.13
CTNNA1-223ENST00000520520 TM9SF4Q92544 642 aa8□□□□□ -1.13
CTNNA1-223ENST00000520520 SLC41A3Q96GZ6 507 aa8□□□□□ -1.13
CTNNA1-223ENST00000520520 C12orf66Q96MD2 445 aa8□□□□□ -1.13
CTNNA1-223ENST00000520520 LRFN5Q96NI6 719 aa8□□□□□ -1.13
CTNNA1-223ENST00000520520 FCRL4Q96PJ5 515 aa8□□□□□ -1.13
CTNNA1-223ENST00000520520 SECISBP2Q96T21 854 aaKnown RBP8□□□□□ -1.13
CTNNA1-223ENST00000520520 MCHR1Q99705 422 aa8□□□□□ -1.13
CTNNA1-223ENST00000520520 TM9SF2Q99805 663 aa8□□□□□ -1.13
CTNNA1-223ENST00000520520 SOSTQ9BQB4 213 aa8□□□□□ -1.13
CTNNA1-223ENST00000520520 NDC1Q9BTX1 674 aa8□□□□□ -1.13
CTNNA1-223ENST00000520520 C1QTNF2Q9BXJ5 285 aa8□□□□□ -1.13
CTNNA1-223ENST00000520520 DPAGT1Q9H3H5 408 aa8□□□□□ -1.13
CTNNA1-223ENST00000520520 RERGLQ9H628 205 aa8□□□□□ -1.13
CTNNA1-223ENST00000520520 PPP1R3EQ9H7J1 279 aa8□□□□□ -1.13
CTNNA1-223ENST00000520520 LHX9Q9NQ69 397 aa8□□□□□ -1.13
CTNNA1-223ENST00000520520 IL20Q9NYY1 176 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms