RNA–Protein interactions for RNA: ENST00000519362.5

SPIDR-210, Transcript of scaffold protein involved in DNA repair, human

TSL 2

Gene SPIDR, Length 1,807 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-210	ENST00000519362	LMF1	Q96S06	567 aa		11.37	□□□□□ -0.59
SPIDR-210	ENST00000519362	SECISBP2	Q96T21	854 aa	Known RBP	11.37	□□□□□ -0.59
SPIDR-210	ENST00000519362	CDX2	Q99626	313 aa	Predicted RBP	11.37	□□□□□ -0.59
SPIDR-210	ENST00000519362	TIMP4	Q99727	224 aa		11.37	□□□□□ -0.59
SPIDR-210	ENST00000519362	MED20	Q9H944	212 aa		11.37	□□□□□ -0.59
SPIDR-210	ENST00000519362	MCCC2	Q9HCC0	563 aa		11.37	□□□□□ -0.59
SPIDR-210	ENST00000519362	RHBDL2	Q9NX52	303 aa		11.37	□□□□□ -0.59
SPIDR-210	ENST00000519362	DHCR7	Q9UBM7	475 aa	Known RBP	11.37	□□□□□ -0.59
SPIDR-210	ENST00000519362	ICAM5	Q9UMF0	924 aa		11.37	□□□□□ -0.59
SPIDR-210	ENST00000519362	SLC35A3	Q9Y2D2	325 aa		11.37	□□□□□ -0.59
SPIDR-210	ENST00000519362	YARS2	Q9Y2Z4	477 aa	Known RBP	11.37	□□□□□ -0.59
SPIDR-210	ENST00000519362		A0A087WUJ7	227 aa		11.37	□□□□□ -0.59
SPIDR-210	ENST00000519362	ISPD	A4D126	451 aa		11.37	□□□□□ -0.59
SPIDR-210	ENST00000519362	CTDSP2	O14595	271 aa		11.37	□□□□□ -0.59
SPIDR-210	ENST00000519362	POLR1C	O15160	346 aa	Predicted RBP	11.37	□□□□□ -0.59
SPIDR-210	ENST00000519362	LRRTM2	O43300	516 aa		11.37	□□□□□ -0.59
SPIDR-210	ENST00000519362	IL33	O95760	270 aa		11.37	□□□□□ -0.59
SPIDR-210	ENST00000519362	IL1A	P01583	271 aa		11.37	□□□□□ -0.59
SPIDR-210	ENST00000519362	DCN	P07585	359 aa	Known RBP	11.37	□□□□□ -0.59
SPIDR-210	ENST00000519362	FOLR1	P15328	257 aa		11.37	□□□□□ -0.59
SPIDR-210	ENST00000519362	SLC2A5	P22732	501 aa		11.37	□□□□□ -0.59
SPIDR-210	ENST00000519362	FGF9	P31371	208 aa	Predicted RBP	11.37	□□□□□ -0.59
SPIDR-210	ENST00000519362	PPIC	P45877	212 aa		11.37	□□□□□ -0.59
SPIDR-210	ENST00000519362	ARL4D	P49703	201 aa		11.37	□□□□□ -0.59
SPIDR-210	ENST00000519362	GPR143	P51810	404 aa		11.37	□□□□□ -0.59
SPIDR-210	ENST00000519362	EFNA3	P52797	238 aa		11.37	□□□□□ -0.59
SPIDR-210	ENST00000519362	ZP2	Q05996	745 aa		11.37	□□□□□ -0.59
SPIDR-210	ENST00000519362	CRYZ	Q08257	329 aa	Known RBP	11.37	□□□□□ -0.59
SPIDR-210	ENST00000519362	ZNF181	Q2M3W8	571 aa		11.37	□□□□□ -0.59
SPIDR-210	ENST00000519362	PRAMEF17	Q5VTA0	474 aa		11.37	□□□□□ -0.59
SPIDR-210	ENST00000519362	C22orf42	Q6IC83	251 aa		11.37	□□□□□ -0.59
SPIDR-210	ENST00000519362	WDR74	Q6RFH5	385 aa	Predicted RBP	11.37	□□□□□ -0.59
SPIDR-210	ENST00000519362	ZNF322	Q6U7Q0	402 aa	Predicted RBP	11.37	□□□□□ -0.59
SPIDR-210	ENST00000519362	PLEKHG7	Q6ZR37	379 aa		11.37	□□□□□ -0.59
SPIDR-210	ENST00000519362		Q7L0L9	218 aa		11.37	□□□□□ -0.59
SPIDR-210	ENST00000519362	CADM2	Q8N3J6	435 aa		11.37	□□□□□ -0.59
SPIDR-210	ENST00000519362	DEFB123	Q8N688	67 aa		11.37	□□□□□ -0.59
SPIDR-210	ENST00000519362	SLC37A3	Q8NCC5	494 aa		11.37	□□□□□ -0.59
SPIDR-210	ENST00000519362	OR51G2	Q8NGK0	314 aa		11.37	□□□□□ -0.59
SPIDR-210	ENST00000519362	DNAJA4	Q8WW22	397 aa	Predicted RBP	11.37	□□□□□ -0.59
SPIDR-210	ENST00000519362	TSLP	Q969D9	159 aa		11.37	□□□□□ -0.59
SPIDR-210	ENST00000519362	SLC25A46	Q96AG3	418 aa		11.37	□□□□□ -0.59
SPIDR-210	ENST00000519362	EFHD2	Q96C19	240 aa	Predicted RBP	11.37	□□□□□ -0.59
SPIDR-210	ENST00000519362	KCNS3	Q9BQ31	491 aa		11.37	□□□□□ -0.59
SPIDR-210	ENST00000519362	MED18	Q9BUE0	208 aa		11.37	□□□□□ -0.59
SPIDR-210	ENST00000519362	HOXD1	Q9GZZ0	328 aa		11.37	□□□□□ -0.59
SPIDR-210	ENST00000519362	PNO1	Q9NRX1	252 aa	Known RBP	11.37	□□□□□ -0.59
SPIDR-210	ENST00000519362	CRNN	Q9UBG3	495 aa	Predicted RBP	11.37	□□□□□ -0.59
SPIDR-210	ENST00000519362	LAMA1	P25391	3075 aa		11.36	□□□□□ -0.59
SPIDR-210	ENST00000519362	PNMA8C	A0A1B0GUJ8	204 aa		11.36	□□□□□ -0.59
SPIDR-210	ENST00000519362	IQCM	A0A1B0GVH7	501 aa		11.36	□□□□□ -0.59
SPIDR-210	ENST00000519362	TCRBV16S1A1N1	A0A5B0	115 aa		11.36	□□□□□ -0.59
SPIDR-210	ENST00000519362	CCDC182	A6NF36	153 aa		11.36	□□□□□ -0.59
SPIDR-210	ENST00000519362	SLC22A31	A6NKX4	558 aa		11.36	□□□□□ -0.59
SPIDR-210	ENST00000519362	PRR23D1	E9PI22	279 aa	Predicted RBP	11.36	□□□□□ -0.59
SPIDR-210	ENST00000519362	SLC30A4	O14863	429 aa		11.36	□□□□□ -0.59
SPIDR-210	ENST00000519362	AKAP8	O43823	692 aa	Known RBP	11.36	□□□□□ -0.59
SPIDR-210	ENST00000519362	PRKN	O60260	465 aa	Predicted RBP	11.36	□□□□□ -0.59
SPIDR-210	ENST00000519362	DDAH2	O95865	285 aa		11.36	□□□□□ -0.59
SPIDR-210	ENST00000519362	PRR23D2	P0DMB1	279 aa	Predicted RBP	11.36	□□□□□ -0.59
SPIDR-210	ENST00000519362	PEPD	P12955	493 aa		11.36	□□□□□ -0.59
SPIDR-210	ENST00000519362	MYF5	P13349	255 aa		11.36	□□□□□ -0.59
SPIDR-210	ENST00000519362	PAICS	P22234	425 aa	Known RBP	11.36	□□□□□ -0.59
SPIDR-210	ENST00000519362	RORA	P35398	523 aa		11.36	□□□□□ -0.59
SPIDR-210	ENST00000519362	ATP6V1E1	P36543	226 aa		11.36	□□□□□ -0.59
SPIDR-210	ENST00000519362	FABP5	Q01469	135 aa		11.36	□□□□□ -0.59
SPIDR-210	ENST00000519362	ZNF791	Q3KP31	576 aa	Predicted RBP	11.36	□□□□□ -0.59
SPIDR-210	ENST00000519362	B3GLCT	Q6Y288	498 aa		11.36	□□□□□ -0.59
SPIDR-210	ENST00000519362	KMT5C	Q86Y97	462 aa		11.36	□□□□□ -0.59
SPIDR-210	ENST00000519362	LYSMD2	Q8IV50	215 aa		11.36	□□□□□ -0.59
SPIDR-210	ENST00000519362	SLITRK4	Q8IW52	837 aa		11.36	□□□□□ -0.59
SPIDR-210	ENST00000519362	TMEM151B	Q8IW70	566 aa		11.36	□□□□□ -0.59
SPIDR-210	ENST00000519362	ZNF440	Q8IYI8	595 aa		11.36	□□□□□ -0.59
SPIDR-210	ENST00000519362	ACBD7	Q8N6N7	88 aa		11.36	□□□□□ -0.59
SPIDR-210	ENST00000519362	ARIH2OS	Q8N7S6	290 aa		11.36	□□□□□ -0.59
SPIDR-210	ENST00000519362		Q8N9G6	341 aa	Predicted RBP	11.36	□□□□□ -0.59
SPIDR-210	ENST00000519362	OR4C6	Q8NH72	309 aa		11.36	□□□□□ -0.59
SPIDR-210	ENST00000519362	ZNF721	Q8TF20	911 aa		11.36	□□□□□ -0.59
SPIDR-210	ENST00000519362	SPRYD4	Q8WW59	207 aa	Predicted RBP	11.36	□□□□□ -0.59
SPIDR-210	ENST00000519362	ADIPOR1	Q96A54	375 aa		11.36	□□□□□ -0.59
SPIDR-210	ENST00000519362	NACC2	Q96BF6	587 aa		11.36	□□□□□ -0.59
SPIDR-210	ENST00000519362	OTULIN	Q96BN8	352 aa		11.36	□□□□□ -0.59
SPIDR-210	ENST00000519362	C3orf49	Q96BT1	292 aa		11.36	□□□□□ -0.59
SPIDR-210	ENST00000519362	C1GALT1C1	Q96EU7	318 aa		11.36	□□□□□ -0.59
SPIDR-210	ENST00000519362	KCTD7	Q96MP8	289 aa		11.36	□□□□□ -0.59
SPIDR-210	ENST00000519362	TEAD3	Q99594	435 aa		11.36	□□□□□ -0.59
SPIDR-210	ENST00000519362	TM9SF2	Q99805	663 aa		11.36	□□□□□ -0.59
SPIDR-210	ENST00000519362	YIPF2	Q9BWQ6	316 aa		11.36	□□□□□ -0.59
SPIDR-210	ENST00000519362	NXF5	Q9H1B4	397 aa	Known RBP	11.36	□□□□□ -0.59
SPIDR-210	ENST00000519362	SMURF1	Q9HCE7	757 aa		11.36	□□□□□ -0.59
SPIDR-210	ENST00000519362	UBQLN4	Q9NRR5	601 aa		11.36	□□□□□ -0.59
SPIDR-210	ENST00000519362	SNTG1	Q9NSN8	517 aa		11.36	□□□□□ -0.59
SPIDR-210	ENST00000519362	RPS6KB2	Q9UBS0	482 aa		11.36	□□□□□ -0.59
SPIDR-210	ENST00000519362	SERTAD3	Q9UJW9	196 aa		11.36	□□□□□ -0.59
SPIDR-210	ENST00000519362	CAB39	Q9Y376	341 aa	Predicted RBP	11.36	□□□□□ -0.59
SPIDR-210	ENST00000519362	SIT1	Q9Y3P8	196 aa		11.36	□□□□□ -0.59
SPIDR-210	ENST00000519362	TRDV1	A0A1B0GX56	115 aa		11.35	□□□□□ -0.59
SPIDR-210	ENST00000519362	ZC3H12D	A2A288	527 aa	Known RBP	11.35	□□□□□ -0.59
SPIDR-210	ENST00000519362	FRG2C	A6NGY1	282 aa		11.35	□□□□□ -0.59
SPIDR-210	ENST00000519362	RIIAD1	A6NNX1	92 aa		11.35	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms