RNA–Protein interactions for RNA: ENST00000518824.5

VEGFA-219, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-219ENST00000518824 RETREG3Q86VR2 466 aa11.91□□□□□ -0.5
VEGFA-219ENST00000518824 WDR60Q8WVS4 1066 aa11.91□□□□□ -0.5
VEGFA-219ENST00000518824 NRGNQ92686 78 aa11.91□□□□□ -0.5
VEGFA-219ENST00000518824 MRGPRX4Q96LA9 322 aa11.91□□□□□ -0.5
VEGFA-219ENST00000518824 TMEM120AQ9BXJ8 343 aa11.91□□□□□ -0.5
VEGFA-219ENST00000518824 CTPS2Q9NRF8 586 aa11.91□□□□□ -0.5
VEGFA-219ENST00000518824 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.91□□□□□ -0.5
VEGFA-219ENST00000518824 ACER3Q9NUN7 267 aa11.91□□□□□ -0.5
VEGFA-219ENST00000518824 LIPT1Q9Y234 373 aa11.91□□□□□ -0.5
VEGFA-219ENST00000518824 CSMD2Q7Z408 3487 aa11.91□□□□□ -0.5
VEGFA-219ENST00000518824 POLQO75417 2590 aa11.9□□□□□ -0.5
VEGFA-219ENST00000518824 GKN3PP0CG01 181 aa11.9□□□□□ -0.5
VEGFA-219ENST00000518824 ENPP1P22413 925 aa11.9□□□□□ -0.5
VEGFA-219ENST00000518824 ELK4P28324 431 aa11.9□□□□□ -0.5
VEGFA-219ENST00000518824 SSTR2P30874 369 aa11.9□□□□□ -0.5
VEGFA-219ENST00000518824 KIR2DL3P43628 341 aa11.9□□□□□ -0.5
VEGFA-219ENST00000518824 CARD18P57730 90 aa11.9□□□□□ -0.5
VEGFA-219ENST00000518824 MERTKQ12866 999 aa11.9□□□□□ -0.5
VEGFA-219ENST00000518824 SELPLGQ14242 412 aa11.9□□□□□ -0.5
VEGFA-219ENST00000518824 ZNF239Q16600 458 aaKnown RBP11.9□□□□□ -0.5
VEGFA-219ENST00000518824 COMTD1Q86VU5 262 aa11.9□□□□□ -0.5
VEGFA-219ENST00000518824 CLIP4Q8N3C7 705 aa11.9□□□□□ -0.5
VEGFA-219ENST00000518824 ZNF610Q8N9Z0 462 aa11.9□□□□□ -0.5
VEGFA-219ENST00000518824 OR52P1PQ8NH57 321 aa11.9□□□□□ -0.5
VEGFA-219ENST00000518824 ABHD3Q8WU67 409 aa11.9□□□□□ -0.5
VEGFA-219ENST00000518824 STON2Q8WXE9 905 aa11.9□□□□□ -0.5
VEGFA-219ENST00000518824 ZNF559Q9BR84 538 aa11.9□□□□□ -0.5
VEGFA-219ENST00000518824 CCDC106Q9BWC9 280 aa11.9□□□□□ -0.5
VEGFA-219ENST00000518824 PRRG4Q9BZD6 226 aa11.9□□□□□ -0.5
VEGFA-219ENST00000518824 ACBD3Q9H3P7 528 aa11.9□□□□□ -0.5
VEGFA-219ENST00000518824 MTHFD2LQ9H903 347 aaPredicted RBP11.9□□□□□ -0.5
VEGFA-219ENST00000518824 MCCC2Q9HCC0 563 aa11.9□□□□□ -0.5
VEGFA-219ENST00000518824 HHATLQ9HCP6 504 aa11.9□□□□□ -0.5
VEGFA-219ENST00000518824 P2RX2Q9UBL9 471 aa11.9□□□□□ -0.5
VEGFA-219ENST00000518824 PACSIN3Q9UKS6 424 aa11.9□□□□□ -0.5
VEGFA-219ENST00000518824 SLC35A3Q9Y2D2 325 aa11.9□□□□□ -0.5
VEGFA-219ENST00000518824 A0A1W2PP18 115 aa11.89□□□□□ -0.51
VEGFA-219ENST00000518824 BMP2P12643 396 aa11.89□□□□□ -0.51
VEGFA-219ENST00000518824 PRG2P13727 222 aa11.89□□□□□ -0.51
VEGFA-219ENST00000518824 IL7RP16871 459 aa11.89□□□□□ -0.51
VEGFA-219ENST00000518824 PGCP20142 388 aa11.89□□□□□ -0.51
VEGFA-219ENST00000518824 CCNA2P20248 432 aa11.89□□□□□ -0.51
VEGFA-219ENST00000518824 ME2P23368 584 aa11.89□□□□□ -0.51
VEGFA-219ENST00000518824 CCKARP32238 428 aa11.89□□□□□ -0.51
VEGFA-219ENST00000518824 CPOXP36551 454 aa11.89□□□□□ -0.51
VEGFA-219ENST00000518824 IDH2P48735 452 aaKnown RBP11.89□□□□□ -0.51
VEGFA-219ENST00000518824 ANXA11P50995 505 aaKnown RBP11.89□□□□□ -0.51
VEGFA-219ENST00000518824 EEF1A1P68104 462 aaKnown RBP11.89□□□□□ -0.51
VEGFA-219ENST00000518824 TXNL4AP83876 142 aaKnown RBP11.89□□□□□ -0.51
VEGFA-219ENST00000518824 SELENBP1Q13228 472 aa11.89□□□□□ -0.51
VEGFA-219ENST00000518824 OR2A2Q6IF42 318 aa11.89□□□□□ -0.51
VEGFA-219ENST00000518824 C22orf34Q6ZV56 151 aa11.89□□□□□ -0.51
VEGFA-219ENST00000518824 ADGRG3Q86Y34 549 aa11.89□□□□□ -0.51
VEGFA-219ENST00000518824 ARFGAP2Q8N6H7 521 aa11.89□□□□□ -0.51
VEGFA-219ENST00000518824 NFKBIDQ8NI38 313 aa11.89□□□□□ -0.51
VEGFA-219ENST00000518824 ZNF563Q8TA94 476 aa11.89□□□□□ -0.51
VEGFA-219ENST00000518824 ST8SIA1Q92185 356 aa11.89□□□□□ -0.51
VEGFA-219ENST00000518824 ARL5BQ96KC2 179 aa11.89□□□□□ -0.51
VEGFA-219ENST00000518824 OR5B2Q96R09 309 aa11.89□□□□□ -0.51
VEGFA-219ENST00000518824 CPPED1Q9BRF8 314 aaPredicted RBP11.89□□□□□ -0.51
VEGFA-219ENST00000518824 GPATCH1Q9BRR8 931 aaKnown RBP11.89□□□□□ -0.51
VEGFA-219ENST00000518824 OR11A1Q9GZK7 315 aa11.89□□□□□ -0.51
VEGFA-219ENST00000518824 KCNN3Q9UGI6 736 aa11.89□□□□□ -0.51
VEGFA-219ENST00000518824 ING1Q9UK53 422 aaPredicted RBP11.89□□□□□ -0.51
VEGFA-219ENST00000518824 FREM1Q5H8C1 2179 aa11.88□□□□□ -0.51
VEGFA-219ENST00000518824 FBP2O00757 339 aa11.88□□□□□ -0.51
VEGFA-219ENST00000518824 MSTNO14793 375 aa11.88□□□□□ -0.51
VEGFA-219ENST00000518824 FRS3O43559 492 aa11.88□□□□□ -0.51
VEGFA-219ENST00000518824 SYNGR4O95473 234 aa11.88□□□□□ -0.51
VEGFA-219ENST00000518824 CRHP06850 196 aa11.88□□□□□ -0.51
VEGFA-219ENST00000518824 DBIP07108 87 aaKnown RBP11.88□□□□□ -0.51
VEGFA-219ENST00000518824 EDNRAP25101 427 aa11.88□□□□□ -0.51
VEGFA-219ENST00000518824 ACAA2P42765 397 aaKnown RBP11.88□□□□□ -0.51
VEGFA-219ENST00000518824 CPA2P48052 419 aa11.88□□□□□ -0.51
VEGFA-219ENST00000518824 CRISP3P54108 245 aa11.88□□□□□ -0.51
VEGFA-219ENST00000518824 HOXC5Q00444 222 aa11.88□□□□□ -0.51
VEGFA-219ENST00000518824 FAM214BQ7L5A3 538 aa11.88□□□□□ -0.51
VEGFA-219ENST00000518824 NUFIP2Q7Z417 695 aaKnown RBP11.88□□□□□ -0.51
VEGFA-219ENST00000518824 RNF128Q8TEB7 428 aa11.88□□□□□ -0.51
VEGFA-219ENST00000518824 PIGMQ9H3S5 423 aa11.88□□□□□ -0.51
VEGFA-219ENST00000518824 LIME1Q9H400 295 aa11.88□□□□□ -0.51
VEGFA-219ENST00000518824 A4GALTQ9NPC4 353 aa11.88□□□□□ -0.51
VEGFA-219ENST00000518824 EXOSC3Q9NQT5 275 aaKnown RBP11.88□□□□□ -0.51
VEGFA-219ENST00000518824 STOML1Q9UBI4 398 aa11.88□□□□□ -0.51
VEGFA-219ENST00000518824 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.88□□□□□ -0.51
VEGFA-219ENST00000518824 MCTS1Q9ULC4 181 aaKnown RBP11.88□□□□□ -0.51
VEGFA-219ENST00000518824 ZNF443Q9Y2A4 671 aaPredicted RBP11.88□□□□□ -0.51
VEGFA-219ENST00000518824 TMEM72A0PK05 275 aa11.87□□□□□ -0.51
VEGFA-219ENST00000518824 ZC3H12DA2A288 527 aaKnown RBP11.87□□□□□ -0.51
VEGFA-219ENST00000518824 CDHR4A6H8M9 788 aa11.87□□□□□ -0.51
VEGFA-219ENST00000518824 TUBAL3A6NHL2 446 aa11.87□□□□□ -0.51
VEGFA-219ENST00000518824 ZNF814B7Z6K7 855 aa11.87□□□□□ -0.51
VEGFA-219ENST00000518824 SMAD9O15198 467 aaKnown RBP11.87□□□□□ -0.51
VEGFA-219ENST00000518824 RAMP1O60894 148 aa11.87□□□□□ -0.51
VEGFA-219ENST00000518824 SS18L1O75177 396 aaPredicted RBP11.87□□□□□ -0.51
VEGFA-219ENST00000518824 CTAG2O75638 210 aa11.87□□□□□ -0.51
VEGFA-219ENST00000518824 PGM3O95394 542 aa11.87□□□□□ -0.51
VEGFA-219ENST00000518824 VIMP08670 466 aaKnown RBP11.87□□□□□ -0.51
VEGFA-219ENST00000518824 ARAFP10398 606 aa11.87□□□□□ -0.51
VEGFA-219ENST00000518824 AGTR1P30556 359 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms