RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 ASB8Q9H765 288 aa3.14□□□□□ -1.91
SQLE-202ENST00000518604 WARS2Q9UGM6 360 aaKnown RBP3.14□□□□□ -1.91
SQLE-202ENST00000518604 RASD1Q9Y272 281 aa3.14□□□□□ -1.91
SQLE-202ENST00000518604 XPO1O14980 1071 aaKnown RBP3.13□□□□□ -1.91
SQLE-202ENST00000518604 RS1O15537 224 aa3.13□□□□□ -1.91
SQLE-202ENST00000518604 TM7SF2O76062 418 aa3.13□□□□□ -1.91
SQLE-202ENST00000518604 GNA14O95837 355 aa3.13□□□□□ -1.91
SQLE-202ENST00000518604 IGLV1-47P01700 117 aa3.13□□□□□ -1.91
SQLE-202ENST00000518604 IGHV3-48P01763 117 aa3.13□□□□□ -1.91
SQLE-202ENST00000518604 HNRNPA2B1P22626 353 aaKnown RBP3.13□□□□□ -1.91
SQLE-202ENST00000518604 HPCAL1P37235 193 aa3.13□□□□□ -1.91
SQLE-202ENST00000518604 WNT4P56705 351 aa3.13□□□□□ -1.91
SQLE-202ENST00000518604 HSD17B7P56937 341 aa3.13□□□□□ -1.91
SQLE-202ENST00000518604 RPS8P62241 208 aaKnown RBP3.13□□□□□ -1.91
SQLE-202ENST00000518604 CBX1P83916 185 aa3.13□□□□□ -1.91
SQLE-202ENST00000518604 CCDC173Q0VFZ6 552 aa3.13□□□□□ -1.91
SQLE-202ENST00000518604 MXD4Q14582 209 aaPredicted RBP3.13□□□□□ -1.91
SQLE-202ENST00000518604 CCDC14Q49A88 953 aa3.13□□□□□ -1.91
SQLE-202ENST00000518604 DNAJC21Q5F1R6 531 aaKnown RBP3.13□□□□□ -1.91
SQLE-202ENST00000518604 CCDC137Q6PK04 289 aaKnown RBP3.13□□□□□ -1.91
SQLE-202ENST00000518604 CES3Q6UWW8 571 aa3.13□□□□□ -1.91
SQLE-202ENST00000518604 ARCQ7LC44 396 aa3.13□□□□□ -1.91
SQLE-202ENST00000518604 GMCL1P1Q8NEA9 526 aa3.13□□□□□ -1.91
SQLE-202ENST00000518604 STXBP6Q8NFX7 210 aa3.13□□□□□ -1.91
SQLE-202ENST00000518604 OR2T34Q8NGX1 318 aa3.13□□□□□ -1.91
SQLE-202ENST00000518604 DNAJA4Q8WW22 397 aaPredicted RBP3.13□□□□□ -1.91
SQLE-202ENST00000518604 IMMP1LQ96LU5 166 aa3.13□□□□□ -1.91
SQLE-202ENST00000518604 ZIM3Q96PE6 472 aa3.13□□□□□ -1.91
SQLE-202ENST00000518604 TXN2Q99757 166 aa3.13□□□□□ -1.91
SQLE-202ENST00000518604 NIPSNAP3BQ9BS92 247 aa3.13□□□□□ -1.91
SQLE-202ENST00000518604 RAB33BQ9H082 229 aa3.13□□□□□ -1.91
SQLE-202ENST00000518604 NXF5Q9H1B4 397 aaKnown RBP3.13□□□□□ -1.91
SQLE-202ENST00000518604 RMND5AQ9H871 391 aa3.13□□□□□ -1.91
SQLE-202ENST00000518604 ZDHHC11Q9H8X9 412 aa3.13□□□□□ -1.91
SQLE-202ENST00000518604 ELOVL3Q9HB03 270 aa3.13□□□□□ -1.91
SQLE-202ENST00000518604 PALMDQ9NP74 551 aa3.13□□□□□ -1.91
SQLE-202ENST00000518604 ANAPC11Q9NYG5 84 aa3.13□□□□□ -1.91
SQLE-202ENST00000518604 CD274Q9NZQ7 290 aa3.13□□□□□ -1.91
SQLE-202ENST00000518604 RNF14Q9UBS8 474 aa3.13□□□□□ -1.91
SQLE-202ENST00000518604 BLOC1S6Q9UL45 172 aa3.13□□□□□ -1.91
SQLE-202ENST00000518604 RPH3ALQ9UNE2 315 aa3.13□□□□□ -1.91
SQLE-202ENST00000518604 ERVW-1Q9UQF0 538 aa3.13□□□□□ -1.91
SQLE-202ENST00000518604 PRKYO43930 277 aa3.12□□□□□ -1.91
SQLE-202ENST00000518604 RHOBTB1O94844 696 aa3.12□□□□□ -1.91
SQLE-202ENST00000518604 KIAA0754O94854 1291 aa3.12□□□□□ -1.91
SQLE-202ENST00000518604 SLITRK3O94933 977 aa3.12□□□□□ -1.91
SQLE-202ENST00000518604 LRATO95237 230 aa3.12□□□□□ -1.91
SQLE-202ENST00000518604 CA1P00915 261 aaPredicted RBP3.12□□□□□ -1.91
SQLE-202ENST00000518604 PSMA5P28066 241 aa3.12□□□□□ -1.91
SQLE-202ENST00000518604 RGS4P49798 205 aa3.12□□□□□ -1.91
SQLE-202ENST00000518604 PRKXP51817 358 aa3.12□□□□□ -1.91
SQLE-202ENST00000518604 GGTA1PQ4G0N0 100 aa3.12□□□□□ -1.91
SQLE-202ENST00000518604 ATF7IP2Q5U623 682 aa3.12□□□□□ -1.91
SQLE-202ENST00000518604 PYHIN1Q6K0P9 492 aa3.12□□□□□ -1.91
SQLE-202ENST00000518604 UNQ9370/PRO34162Q6UXP9 181 aa3.12□□□□□ -1.91
SQLE-202ENST00000518604 GDPD3Q7L5L3 318 aa3.12□□□□□ -1.91
SQLE-202ENST00000518604 ZNF683Q8IZ20 524 aa3.12□□□□□ -1.91
SQLE-202ENST00000518604 ALLCQ8N6M5 410 aa3.12□□□□□ -1.91
SQLE-202ENST00000518604 TRMT10AQ8TBZ6 339 aaKnown RBP3.12□□□□□ -1.91
SQLE-202ENST00000518604 CTNNBL1Q8WYA6 563 aaPredicted RBP3.12□□□□□ -1.91
SQLE-202ENST00000518604 RSPH1Q8WYR4 309 aa3.12□□□□□ -1.91
SQLE-202ENST00000518604 OR1E3Q8WZA6 343 aa3.12□□□□□ -1.91
SQLE-202ENST00000518604 RPL3LQ92901 407 aaKnown RBP3.12□□□□□ -1.91
SQLE-202ENST00000518604 MARC2Q969Z3 335 aa3.12□□□□□ -1.91
SQLE-202ENST00000518604 AMDHD1Q96NU7 426 aa3.12□□□□□ -1.91
SQLE-202ENST00000518604 RNF126Q9BV68 326 aa3.12□□□□□ -1.91
SQLE-202ENST00000518604 RHBGQ9H310 441 aa3.12□□□□□ -1.91
SQLE-202ENST00000518604 CHRNA9Q9UGM1 479 aa3.12□□□□□ -1.91
SQLE-202ENST00000518604 UBQLN1Q9UMX0 589 aaKnown RBP3.12□□□□□ -1.91
SQLE-202ENST00000518604 G3V4G9 280 aa3.11□□□□□ -1.91
SQLE-202ENST00000518604 H0Y9J4 135 aa3.11□□□□□ -1.91
SQLE-202ENST00000518604 K7N7A8 449 aa3.11□□□□□ -1.91
SQLE-202ENST00000518604 MAGEB3O15480 346 aa3.11□□□□□ -1.91
SQLE-202ENST00000518604 TAPBPO15533 448 aa3.11□□□□□ -1.91
SQLE-202ENST00000518604 EMC8O43402 210 aa3.11□□□□□ -1.91
SQLE-202ENST00000518604 N4BP1O75113 896 aaKnown RBP3.11□□□□□ -1.91
SQLE-202ENST00000518604 MMP23AO75900 390 aa3.11□□□□□ -1.91
SQLE-202ENST00000518604 SNAPINO95295 136 aa3.11□□□□□ -1.91
SQLE-202ENST00000518604 ACTL6AO96019 429 aa3.11□□□□□ -1.91
SQLE-202ENST00000518604 TIMP1P01033 207 aa3.11□□□□□ -1.91
SQLE-202ENST00000518604 CD1EP15812 388 aa3.11□□□□□ -1.91
SQLE-202ENST00000518604 RPA2P15927 270 aa3.11□□□□□ -1.91
SQLE-202ENST00000518604 ELK1P19419 428 aa3.11□□□□□ -1.91
SQLE-202ENST00000518604 AQP1P29972 269 aa3.11□□□□□ -1.91
SQLE-202ENST00000518604 TDO2P48775 406 aa3.11□□□□□ -1.91
SQLE-202ENST00000518604 GANABQ14697 944 aaKnown RBP3.11□□□□□ -1.91
SQLE-202ENST00000518604 ARL6IP1Q15041 203 aa3.11□□□□□ -1.91
SQLE-202ENST00000518604 TMEM225Q6GV28 225 aa3.11□□□□□ -1.91
SQLE-202ENST00000518604 ERI1Q8IV48 349 aaKnown RBP3.11□□□□□ -1.91
SQLE-202ENST00000518604 CLEC4FQ8N1N0 589 aa3.11□□□□□ -1.91
SQLE-202ENST00000518604 Q8N7P7 452 aa3.11□□□□□ -1.91
SQLE-202ENST00000518604 CCDC71LQ8N9Z2 235 aa3.11□□□□□ -1.91
SQLE-202ENST00000518604 OR51G2Q8NGK0 314 aa3.11□□□□□ -1.91
SQLE-202ENST00000518604 NUS1Q96E22 293 aa3.11□□□□□ -1.91
SQLE-202ENST00000518604 ZNF670Q9BS34 389 aa3.11□□□□□ -1.91
SQLE-202ENST00000518604 POLR1EQ9GZS1 481 aaKnown RBP3.11□□□□□ -1.91
SQLE-202ENST00000518604 SH2D2AQ9NP31 389 aa3.11□□□□□ -1.91
SQLE-202ENST00000518604 PLSCR3Q9NRY6 295 aa3.11□□□□□ -1.91
SQLE-202ENST00000518604 NYAP2Q9P242 653 aa3.11□□□□□ -1.91
SQLE-202ENST00000518604 CGNQ9P2M7 1197 aaKnown RBP3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms