RNA–Protein interactions for RNA: ENST00000517238.1

SNORA40.16-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 121 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.16-201ENST00000517238 BECN1Q14457 450 aa-2.07□□□□□ -2.74
SNORA40.16-201ENST00000517238 ANKRD1Q15327 319 aa-2.07□□□□□ -2.74
SNORA40.16-201ENST00000517238 PGGHGQ32M88 737 aa-2.07□□□□□ -2.74
SNORA40.16-201ENST00000517238 DPCR1Q3MIW9 517 aa-2.07□□□□□ -2.74
SNORA40.16-201ENST00000517238 FBXL19-AS1Q494R0 122 aa-2.07□□□□□ -2.74
SNORA40.16-201ENST00000517238 DUSP28Q4G0W2 176 aa-2.07□□□□□ -2.74
SNORA40.16-201ENST00000517238 ZNF542PQ5EBM4 170 aa-2.07□□□□□ -2.74
SNORA40.16-201ENST00000517238 FAM222AQ5U5X8 452 aa-2.07□□□□□ -2.74
SNORA40.16-201ENST00000517238 C1orf146Q5VVC0 180 aa-2.07□□□□□ -2.74
SNORA40.16-201ENST00000517238 TOM1L2Q6ZVM7 507 aa-2.07□□□□□ -2.74
SNORA40.16-201ENST00000517238 JAZF1Q86VZ6 243 aa-2.07□□□□□ -2.74
SNORA40.16-201ENST00000517238 TMEM173Q86WV6 379 aaPredicted RBP-2.07□□□□□ -2.74
SNORA40.16-201ENST00000517238 SCYL3Q8IZE3 742 aa-2.07□□□□□ -2.74
SNORA40.16-201ENST00000517238 POMGNT2Q8NAT1 580 aa-2.07□□□□□ -2.74
SNORA40.16-201ENST00000517238 OR13C5Q8NGS8 318 aa-2.07□□□□□ -2.74
SNORA40.16-201ENST00000517238 CD300LFQ8TDQ1 290 aa-2.07□□□□□ -2.74
SNORA40.16-201ENST00000517238 ZNF707Q96C28 371 aaPredicted RBP-2.07□□□□□ -2.74
SNORA40.16-201ENST00000517238 PGM2Q96G03 612 aa-2.07□□□□□ -2.74
SNORA40.16-201ENST00000517238 CCDC114Q96M63 670 aa-2.07□□□□□ -2.74
SNORA40.16-201ENST00000517238 ZFP3Q96NJ6 502 aa-2.07□□□□□ -2.74
SNORA40.16-201ENST00000517238 OR52B2Q96RD2 323 aa-2.07□□□□□ -2.74
SNORA40.16-201ENST00000517238 P2RX4Q99571 388 aa-2.07□□□□□ -2.74
SNORA40.16-201ENST00000517238 C19orf43Q9BQ61 176 aa-2.07□□□□□ -2.74
SNORA40.16-201ENST00000517238 TWSG1Q9GZX9 223 aa-2.07□□□□□ -2.74
SNORA40.16-201ENST00000517238 C16orf95Q9H693 158 aa-2.07□□□□□ -2.74
SNORA40.16-201ENST00000517238 METTL7AQ9H8H3 244 aa-2.07□□□□□ -2.74
SNORA40.16-201ENST00000517238 TM9SF3Q9HD45 589 aa-2.07□□□□□ -2.74
SNORA40.16-201ENST00000517238 PNO1Q9NRX1 252 aaKnown RBP-2.07□□□□□ -2.74
SNORA40.16-201ENST00000517238 MRPL16Q9NX20 251 aaKnown RBP-2.07□□□□□ -2.74
SNORA40.16-201ENST00000517238 SPRR3Q9UBC9 169 aa-2.07□□□□□ -2.74
SNORA40.16-201ENST00000517238 CTSFQ9UBX1 484 aa-2.07□□□□□ -2.74
SNORA40.16-201ENST00000517238 TMCC3Q9ULS5 477 aa-2.07□□□□□ -2.74
SNORA40.16-201ENST00000517238 ABT1Q9ULW3 272 aaKnown RBP-2.07□□□□□ -2.74
SNORA40.16-201ENST00000517238 NPIPA1Q9UND3 350 aa-2.07□□□□□ -2.74
SNORA40.16-201ENST00000517238 NBPF19A0A087WUL8 3843 aa-2.08□□□□□ -2.74
SNORA40.16-201ENST00000517238 HELTA6NFD8 242 aa-2.08□□□□□ -2.74
SNORA40.16-201ENST00000517238 A8MXQ7 604 aa-2.08□□□□□ -2.74
SNORA40.16-201ENST00000517238 E7EWF7 191 aa-2.08□□□□□ -2.74
SNORA40.16-201ENST00000517238 CLDN34H7C241 214 aa-2.08□□□□□ -2.74
SNORA40.16-201ENST00000517238 PAGE4O60829 102 aa-2.08□□□□□ -2.74
SNORA40.16-201ENST00000517238 ANXA9O76027 345 aa-2.08□□□□□ -2.74
SNORA40.16-201ENST00000517238 LALBAP00709 142 aa-2.08□□□□□ -2.74
SNORA40.16-201ENST00000517238 TK1P04183 234 aa-2.08□□□□□ -2.74
SNORA40.16-201ENST00000517238 PRLRP16471 622 aa-2.08□□□□□ -2.74
SNORA40.16-201ENST00000517238 PSMB5P28074 263 aa-2.08□□□□□ -2.74
SNORA40.16-201ENST00000517238 CST5P28325 142 aaPredicted RBP-2.08□□□□□ -2.74
SNORA40.16-201ENST00000517238 ABCD1P33897 745 aa-2.08□□□□□ -2.74
SNORA40.16-201ENST00000517238 GPR4P46093 362 aa-2.08□□□□□ -2.74
SNORA40.16-201ENST00000517238 RFX3P48380 749 aa-2.08□□□□□ -2.74
SNORA40.16-201ENST00000517238 HARS2P49590 506 aaKnown RBP-2.08□□□□□ -2.74
SNORA40.16-201ENST00000517238 CACNG1Q06432 222 aa-2.08□□□□□ -2.74
SNORA40.16-201ENST00000517238 CUL2Q13617 745 aa-2.08□□□□□ -2.74
SNORA40.16-201ENST00000517238 CUL3Q13618 768 aa-2.08□□□□□ -2.74
SNORA40.16-201ENST00000517238 KCNJ11Q14654 390 aa-2.08□□□□□ -2.74
SNORA40.16-201ENST00000517238 PDK1Q15118 436 aa-2.08□□□□□ -2.74
SNORA40.16-201ENST00000517238 NPTX1Q15818 432 aa-2.08□□□□□ -2.74
SNORA40.16-201ENST00000517238 ZNF699Q32M78 642 aa-2.08□□□□□ -2.74
SNORA40.16-201ENST00000517238 C12orf74Q32Q52 190 aa-2.08□□□□□ -2.74
SNORA40.16-201ENST00000517238 PCGF3Q3KNV8 242 aa-2.08□□□□□ -2.74
SNORA40.16-201ENST00000517238 TMCO4Q5TGY1 634 aa-2.08□□□□□ -2.74
SNORA40.16-201ENST00000517238 PLPP4Q5VZY2 271 aa-2.08□□□□□ -2.74
SNORA40.16-201ENST00000517238 KLHL10Q6JEL2 608 aa-2.08□□□□□ -2.74
SNORA40.16-201ENST00000517238 MED27Q6P2C8 311 aa-2.08□□□□□ -2.74
SNORA40.16-201ENST00000517238 PRMT9Q6P2P2 845 aa-2.08□□□□□ -2.74
SNORA40.16-201ENST00000517238 Q6ZTI0 123 aa-2.08□□□□□ -2.74
SNORA40.16-201ENST00000517238 ASRGL1Q7L266 308 aa-2.08□□□□□ -2.74
SNORA40.16-201ENST00000517238 ARCQ7LC44 396 aa-2.08□□□□□ -2.74
SNORA40.16-201ENST00000517238 PRUNE1Q86TP1 453 aa-2.08□□□□□ -2.74
SNORA40.16-201ENST00000517238 CACUL1Q86Y37 369 aa-2.08□□□□□ -2.74
SNORA40.16-201ENST00000517238 CALHM1Q8IU99 346 aa-2.08□□□□□ -2.74
SNORA40.16-201ENST00000517238 TCAIMQ8N3R3 496 aa-2.08□□□□□ -2.74
SNORA40.16-201ENST00000517238 EIF4E3Q8N5X7 224 aaKnown RBP-2.08□□□□□ -2.74
SNORA40.16-201ENST00000517238 SLC35G3Q8N808 338 aa-2.08□□□□□ -2.74
SNORA40.16-201ENST00000517238 NKAPP1Q8N9T2 125 aa-2.08□□□□□ -2.74
SNORA40.16-201ENST00000517238 DENND6BQ8NEG7 585 aa-2.08□□□□□ -2.74
SNORA40.16-201ENST00000517238 ZNF420Q8TAQ5 688 aaPredicted RBP-2.08□□□□□ -2.74
SNORA40.16-201ENST00000517238 FBXO25Q8TCJ0 367 aa-2.08□□□□□ -2.74
SNORA40.16-201ENST00000517238 PLAC4Q8WY50 150 aa-2.08□□□□□ -2.74
SNORA40.16-201ENST00000517238 ARPC1AQ92747 370 aa-2.08□□□□□ -2.74
SNORA40.16-201ENST00000517238 SMARCE1Q969G3 411 aa-2.08□□□□□ -2.74
SNORA40.16-201ENST00000517238 SLC35C1Q96A29 364 aa-2.08□□□□□ -2.74
SNORA40.16-201ENST00000517238 MRPL24Q96A35 216 aaKnown RBP-2.08□□□□□ -2.74
SNORA40.16-201ENST00000517238 RNF125Q96EQ8 232 aa-2.08□□□□□ -2.74
SNORA40.16-201ENST00000517238 THUMPD3Q9BV44 507 aaKnown RBP-2.08□□□□□ -2.74
SNORA40.16-201ENST00000517238 GPR174Q9BXC1 333 aa-2.08□□□□□ -2.74
SNORA40.16-201ENST00000517238 ZSCAN16Q9H4T2 348 aaPredicted RBP-2.08□□□□□ -2.74
SNORA40.16-201ENST00000517238 CCL28Q9NRJ3 127 aa-2.08□□□□□ -2.74
SNORA40.16-201ENST00000517238 IRAK4Q9NWZ3 460 aa-2.08□□□□□ -2.74
SNORA40.16-201ENST00000517238 TMEM161AQ9NX61 479 aa-2.08□□□□□ -2.74
SNORA40.16-201ENST00000517238 TMOD3Q9NYL9 352 aa-2.08□□□□□ -2.74
SNORA40.16-201ENST00000517238 LARSQ9P2J5 1176 aaKnown RBP-2.08□□□□□ -2.74
SNORA40.16-201ENST00000517238 AGTPBP1Q9UPW5 1226 aa-2.08□□□□□ -2.74
SNORA40.16-201ENST00000517238 CADP27708 2225 aa-2.08□□□□□ -2.74
SNORA40.16-201ENST00000517238 KIAA1671Q9BY89 1806 aa-2.08□□□□□ -2.74
SNORA40.16-201ENST00000517238 CNOT1A5YKK6 2376 aaKnown RBP-2.08□□□□□ -2.74
SNORA40.16-201ENST00000517238 TRAV24A0A0B4J272 114 aa-2.09□□□□□ -2.74
SNORA40.16-201ENST00000517238 CCDC162PA2VCL2 907 aa-2.09□□□□□ -2.74
SNORA40.16-201ENST00000517238 GOLGA6L3A6NEY3 463 aa-2.09□□□□□ -2.74
SNORA40.16-201ENST00000517238 FNDC10F2Z333 226 aa-2.09□□□□□ -2.74
SNORA40.16-201ENST00000517238 PGRMC2O15173 223 aa-2.09□□□□□ -2.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms