RNA–Protein interactions for RNA: ENST00000516328.1

RNU6-1338P-201, Transcript of RNA, U6 small nuclear 1338, pseudogene, humanhuman

BASIC

Gene RNU6-1338P, Length 91 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1338P-201ENST00000516328 CNTN2Q02246 1040 aa0.44□□□□□ -2.34
RNU6-1338P-201ENST00000516328 BTG3Q14201 252 aaPredicted RBP0.44□□□□□ -2.34
RNU6-1338P-201ENST00000516328 AGKQ53H12 422 aa0.44□□□□□ -2.34
RNU6-1338P-201ENST00000516328 CTRB2Q6GPI1 263 aa0.44□□□□□ -2.34
RNU6-1338P-201ENST00000516328 FRMPD2BQ6IN97 320 aa0.44□□□□□ -2.34
RNU6-1338P-201ENST00000516328 SHQ1Q6PI26 577 aaKnown RBP0.44□□□□□ -2.34
RNU6-1338P-201ENST00000516328 DUX4L9Q6RFH8 374 aaPredicted RBP0.44□□□□□ -2.34
RNU6-1338P-201ENST00000516328 C16orf54Q6UWD8 224 aa0.44□□□□□ -2.34
RNU6-1338P-201ENST00000516328 B3GLCTQ6Y288 498 aa0.44□□□□□ -2.34
RNU6-1338P-201ENST00000516328 GBP6Q6ZN66 633 aa0.44□□□□□ -2.34
RNU6-1338P-201ENST00000516328 PRSS41Q7RTY9 318 aa0.44□□□□□ -2.34
RNU6-1338P-201ENST00000516328 NAT8LQ8N9F0 302 aa0.44□□□□□ -2.34
RNU6-1338P-201ENST00000516328 OR51S1Q8NGJ8 323 aa0.44□□□□□ -2.34
RNU6-1338P-201ENST00000516328 OR5W2Q8NH69 310 aa0.44□□□□□ -2.34
RNU6-1338P-201ENST00000516328 DTX3LQ8TDB6 740 aa0.44□□□□□ -2.34
RNU6-1338P-201ENST00000516328 PDXPQ96GD0 296 aa0.44□□□□□ -2.34
RNU6-1338P-201ENST00000516328 MS4A14Q96JA4 679 aa0.44□□□□□ -2.34
RNU6-1338P-201ENST00000516328 TRPV6Q9H1D0 765 aa0.44□□□□□ -2.34
RNU6-1338P-201ENST00000516328 EXD2Q9NVH0 621 aa0.44□□□□□ -2.34
RNU6-1338P-201ENST00000516328 DUX4Q9UBX2 424 aa0.44□□□□□ -2.34
RNU6-1338P-201ENST00000516328 A0A1B0GWB2 263 aa0.43□□□□□ -2.34
RNU6-1338P-201ENST00000516328 SH3BP5O60239 455 aa0.43□□□□□ -2.34
RNU6-1338P-201ENST00000516328 SUPT3HO75486 399 aa0.43□□□□□ -2.34
RNU6-1338P-201ENST00000516328 ECI2O75521 394 aa0.43□□□□□ -2.34
RNU6-1338P-201ENST00000516328 LALBAP00709 142 aa0.43□□□□□ -2.34
RNU6-1338P-201ENST00000516328 APOA4P06727 396 aa0.43□□□□□ -2.34
RNU6-1338P-201ENST00000516328 NMT1P30419 496 aaKnown RBP0.43□□□□□ -2.34
RNU6-1338P-201ENST00000516328 TGFBR1P36897 503 aa0.43□□□□□ -2.34
RNU6-1338P-201ENST00000516328 ASMTP46597 345 aa0.43□□□□□ -2.34
RNU6-1338P-201ENST00000516328 PITPNBP48739 271 aa0.43□□□□□ -2.34
RNU6-1338P-201ENST00000516328 CCL11P51671 97 aa0.43□□□□□ -2.34
RNU6-1338P-201ENST00000516328 SELENOTP62341 195 aa0.43□□□□□ -2.34
RNU6-1338P-201ENST00000516328 HERVK_113P63132 956 aa0.43□□□□□ -2.34
RNU6-1338P-201ENST00000516328 ERVK-8P63133 956 aa0.43□□□□□ -2.34
RNU6-1338P-201ENST00000516328 ADARB1P78563 741 aaKnown RBP0.43□□□□□ -2.34
RNU6-1338P-201ENST00000516328 TGFBR3Q03167 851 aa0.43□□□□□ -2.34
RNU6-1338P-201ENST00000516328 CHRNB3Q05901 458 aa0.43□□□□□ -2.34
RNU6-1338P-201ENST00000516328 NME3Q13232 169 aa0.43□□□□□ -2.34
RNU6-1338P-201ENST00000516328 C1orf100Q5SVJ3 147 aa0.43□□□□□ -2.34
RNU6-1338P-201ENST00000516328 LIPNQ5VXI9 398 aa0.43□□□□□ -2.34
RNU6-1338P-201ENST00000516328 SLC39A4Q6P5W5 647 aa0.43□□□□□ -2.34
RNU6-1338P-201ENST00000516328 TOM1L2Q6ZVM7 507 aa0.43□□□□□ -2.34
RNU6-1338P-201ENST00000516328 GOLGA7Q7Z5G4 137 aa0.43□□□□□ -2.34
RNU6-1338P-201ENST00000516328 YRDCQ86U90 279 aaKnown RBP0.43□□□□□ -2.34
RNU6-1338P-201ENST00000516328 ARFGAP2Q8N6H7 521 aa0.43□□□□□ -2.34
RNU6-1338P-201ENST00000516328 ZSCAN4Q8NAM6 433 aaPredicted RBP0.43□□□□□ -2.34
RNU6-1338P-201ENST00000516328 Q8NDZ9 215 aa0.43□□□□□ -2.34
RNU6-1338P-201ENST00000516328 WDR36Q8NI36 951 aaKnown RBP0.43□□□□□ -2.34
RNU6-1338P-201ENST00000516328 DEPDC1BQ8WUY9 529 aa0.43□□□□□ -2.34
RNU6-1338P-201ENST00000516328 ADIPOR1Q96A54 375 aa0.43□□□□□ -2.34
RNU6-1338P-201ENST00000516328 CYP2S1Q96SQ9 504 aa0.43□□□□□ -2.34
RNU6-1338P-201ENST00000516328 KLHDC3Q9BQ90 382 aa0.43□□□□□ -2.34
RNU6-1338P-201ENST00000516328 LZTS2Q9BRK4 669 aa0.43□□□□□ -2.34
RNU6-1338P-201ENST00000516328 NDUFAF3Q9BU61 184 aa0.43□□□□□ -2.34
RNU6-1338P-201ENST00000516328 ERVK-6Q9BXR3 956 aa0.43□□□□□ -2.34
RNU6-1338P-201ENST00000516328 ZNF355PQ9NSJ1 428 aa0.43□□□□□ -2.34
RNU6-1338P-201ENST00000516328 AKAP7Q9P0M2 348 aaPredicted RBP0.43□□□□□ -2.34
RNU6-1338P-201ENST00000516328 COPS7AQ9UBW8 275 aa0.43□□□□□ -2.34
RNU6-1338P-201ENST00000516328 TTLL3Q9Y4R7 772 aa0.43□□□□□ -2.34
RNU6-1338P-201ENST00000516328 TENM3Q9P273 2699 aa0.42□□□□□ -2.34
RNU6-1338P-201ENST00000516328 ZMYM6O95789 1325 aa0.42□□□□□ -2.34
RNU6-1338P-201ENST00000516328 HSFX4A0A1B0GTS1 333 aaPredicted RBP0.42□□□□□ -2.34
RNU6-1338P-201ENST00000516328 HSFX3A0A1B0GWH4 333 aaPredicted RBP0.42□□□□□ -2.34
RNU6-1338P-201ENST00000516328 A0A1W2PP18 115 aa0.42□□□□□ -2.34
RNU6-1338P-201ENST00000516328 E9PBE3 544 aa0.42□□□□□ -2.34
RNU6-1338P-201ENST00000516328 ALOX15BO15296 676 aa0.42□□□□□ -2.34
RNU6-1338P-201ENST00000516328 RBFOX2O43251 390 aaKnown RBP eCLIP0.42□□□□□ -2.34
RNU6-1338P-201ENST00000516328 NME2P1O60361 137 aa0.42□□□□□ -2.34
RNU6-1338P-201ENST00000516328 ATP6V1G1O75348 118 aa0.42□□□□□ -2.34
RNU6-1338P-201ENST00000516328 IGLV2-23P01705 113 aa0.42□□□□□ -2.34
RNU6-1338P-201ENST00000516328 SLC26A3P40879 764 aa0.42□□□□□ -2.34
RNU6-1338P-201ENST00000516328 MAGEA4P43358 317 aa0.42□□□□□ -2.34
RNU6-1338P-201ENST00000516328 BAMBIQ13145 260 aa0.42□□□□□ -2.34
RNU6-1338P-201ENST00000516328 LRIT3Q3SXY7 679 aa0.42□□□□□ -2.34
RNU6-1338P-201ENST00000516328 TMEM52BQ4KMG9 183 aa0.42□□□□□ -2.34
RNU6-1338P-201ENST00000516328 C1orf94Q6P1W5 598 aa0.42□□□□□ -2.34
RNU6-1338P-201ENST00000516328 ZNF620Q6ZNG0 422 aa0.42□□□□□ -2.34
RNU6-1338P-201ENST00000516328 PRSS42Q7Z5A4 293 aa0.42□□□□□ -2.34
RNU6-1338P-201ENST00000516328 FANK1Q8TC84 345 aa0.42□□□□□ -2.34
RNU6-1338P-201ENST00000516328 ARPC1AQ92747 370 aa0.42□□□□□ -2.34
RNU6-1338P-201ENST00000516328 BAG1Q99933 345 aaPredicted RBP0.42□□□□□ -2.34
RNU6-1338P-201ENST00000516328 TMEM121Q9BTD3 319 aa0.42□□□□□ -2.34
RNU6-1338P-201ENST00000516328 ZNF416Q9BWM5 594 aa0.42□□□□□ -2.34
RNU6-1338P-201ENST00000516328 SPATA16Q9BXB7 569 aa0.42□□□□□ -2.34
RNU6-1338P-201ENST00000516328 TEKT3Q9BXF9 490 aa0.42□□□□□ -2.34
RNU6-1338P-201ENST00000516328 ABCG4Q9H172 646 aa0.42□□□□□ -2.34
RNU6-1338P-201ENST00000516328 SLC40A1Q9NP59 571 aa0.42□□□□□ -2.34
RNU6-1338P-201ENST00000516328 B3GNT2Q9NY97 397 aa0.42□□□□□ -2.34
RNU6-1338P-201ENST00000516328 NFKBIL1Q9UBC1 381 aaPredicted RBP0.42□□□□□ -2.34
RNU6-1338P-201ENST00000516328 CFDP1Q9UEE9 299 aaPredicted RBP0.42□□□□□ -2.34
RNU6-1338P-201ENST00000516328 EIF3LQ9Y262 564 aaKnown RBP0.42□□□□□ -2.34
RNU6-1338P-201ENST00000516328 S4R3C0 116 aa0.42□□□□□ -2.34
RNU6-1338P-201ENST00000516328 FCN1O00602 326 aa0.41□□□□□ -2.34
RNU6-1338P-201ENST00000516328 PRB1P04280 392 aa0.41□□□□□ -2.34
RNU6-1338P-201ENST00000516328 ZCCHC18P0CG32 403 aa0.41□□□□□ -2.34
RNU6-1338P-201ENST00000516328 H2AFXP16104 143 aaPredicted RBP0.41□□□□□ -2.34
RNU6-1338P-201ENST00000516328 MARCKSP29966 332 aaPredicted RBP0.41□□□□□ -2.34
RNU6-1338P-201ENST00000516328 KLK7P49862 253 aa0.41□□□□□ -2.34
RNU6-1338P-201ENST00000516328 SNU13P55769 128 aaKnown RBP0.41□□□□□ -2.34
RNU6-1338P-201ENST00000516328 ZNF763Q0D2J5 394 aa0.41□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms