RNA–Protein interactions for RNA: ENST00000515385.1

SMAD1-215, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMAD1, Length 2,085 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-215ENST00000515385 PRF1P14222 555 aa11.91□□□□□ -0.5
SMAD1-215ENST00000515385 ATP5C1P36542 298 aaKnown RBP11.91□□□□□ -0.5
SMAD1-215ENST00000515385 CCL23P55773 120 aa11.91□□□□□ -0.5
SMAD1-215ENST00000515385 H2BFSP57053 126 aa11.91□□□□□ -0.5
SMAD1-215ENST00000515385 TAS2R41P59536 307 aa11.91□□□□□ -0.5
SMAD1-215ENST00000515385 ST3GAL3Q11203 375 aa11.91□□□□□ -0.5
SMAD1-215ENST00000515385 ECH1Q13011 328 aa11.91□□□□□ -0.5
SMAD1-215ENST00000515385 ZNF345Q14585 488 aa11.91□□□□□ -0.5
SMAD1-215ENST00000515385 RNF212Q495C1 297 aa11.91□□□□□ -0.5
SMAD1-215ENST00000515385 MANEAQ5SRI9 462 aa11.91□□□□□ -0.5
SMAD1-215ENST00000515385 DMKNQ6E0U4 476 aaPredicted RBP11.91□□□□□ -0.5
SMAD1-215ENST00000515385 HEPHL1Q6MZM0 1159 aa11.91□□□□□ -0.5
SMAD1-215ENST00000515385 CPOQ8IVL8 374 aa11.91□□□□□ -0.5
SMAD1-215ENST00000515385 BBS1Q8NFJ9 593 aa11.91□□□□□ -0.5
SMAD1-215ENST00000515385 OR4D9Q8NGE8 314 aa11.91□□□□□ -0.5
SMAD1-215ENST00000515385 PLD4Q96BZ4 506 aa11.91□□□□□ -0.5
SMAD1-215ENST00000515385 ZNF285Q96NJ3 590 aa11.91□□□□□ -0.5
SMAD1-215ENST00000515385 PAPPA2Q9BXP8 1791 aa11.91□□□□□ -0.5
SMAD1-215ENST00000515385 PBX4Q9BYU1 374 aa11.91□□□□□ -0.5
SMAD1-215ENST00000515385 HINT3Q9NQE9 182 aaKnown RBP11.91□□□□□ -0.5
SMAD1-215ENST00000515385 MRPL17Q9NRX2 175 aaKnown RBP11.91□□□□□ -0.5
SMAD1-215ENST00000515385 UFSP2Q9NUQ7 469 aa11.91□□□□□ -0.5
SMAD1-215ENST00000515385 ZNF629Q9UEG4 869 aaPredicted RBP11.91□□□□□ -0.5
SMAD1-215ENST00000515385 KANTRA0A1W2PQU2 76 aa11.9□□□□□ -0.5
SMAD1-215ENST00000515385 OR6C68A6NDL8 312 aa11.9□□□□□ -0.5
SMAD1-215ENST00000515385 ACOT7O00154 380 aa11.9□□□□□ -0.5
SMAD1-215ENST00000515385 SYT5O00445 386 aa11.9□□□□□ -0.5
SMAD1-215ENST00000515385 SCAMP1O15126 338 aa11.9□□□□□ -0.5
SMAD1-215ENST00000515385 SIGLEC5O15389 551 aa11.9□□□□□ -0.5
SMAD1-215ENST00000515385 ZNF821O75541 412 aaPredicted RBP11.9□□□□□ -0.5
SMAD1-215ENST00000515385 OR2F2O95006 317 aa11.9□□□□□ -0.5
SMAD1-215ENST00000515385 CH25HO95992 272 aa11.9□□□□□ -0.5
SMAD1-215ENST00000515385 GBAP04062 536 aa11.9□□□□□ -0.5
SMAD1-215ENST00000515385 NR2F1P10589 423 aa11.9□□□□□ -0.5
SMAD1-215ENST00000515385 NOS3P29474 1203 aa11.9□□□□□ -0.5
SMAD1-215ENST00000515385 TRHRP34981 398 aaPredicted RBP11.9□□□□□ -0.5
SMAD1-215ENST00000515385 ANXA11P50995 505 aaKnown RBP11.9□□□□□ -0.5
SMAD1-215ENST00000515385 SIGLEC14Q08ET2 396 aa11.9□□□□□ -0.5
SMAD1-215ENST00000515385 OR2F1Q13607 317 aa11.9□□□□□ -0.5
SMAD1-215ENST00000515385 RBMS2Q15434 407 aaKnown RBP11.9□□□□□ -0.5
SMAD1-215ENST00000515385 ZNF311Q5JNZ3 666 aa11.9□□□□□ -0.5
SMAD1-215ENST00000515385 ZNF697Q5TEC3 545 aa11.9□□□□□ -0.5
SMAD1-215ENST00000515385 NIPAL3Q6P499 406 aa11.9□□□□□ -0.5
SMAD1-215ENST00000515385 CFAP206Q8IYR0 622 aa11.9□□□□□ -0.5
SMAD1-215ENST00000515385 CCDC116Q8IYX3 515 aa11.9□□□□□ -0.5
SMAD1-215ENST00000515385 KCNRGQ8N5I3 272 aa11.9□□□□□ -0.5
SMAD1-215ENST00000515385 OR5M1Q8NGP8 315 aa11.9□□□□□ -0.5
SMAD1-215ENST00000515385 LGALS14Q8TCE9 139 aa11.9□□□□□ -0.5
SMAD1-215ENST00000515385 UBE2E3Q969T4 207 aa11.9□□□□□ -0.5
SMAD1-215ENST00000515385 TMEM169Q96HH4 297 aa11.9□□□□□ -0.5
SMAD1-215ENST00000515385 PGLYRP3Q96LB9 341 aa11.9□□□□□ -0.5
SMAD1-215ENST00000515385 OR1F2PQ96R84 312 aa11.9□□□□□ -0.5
SMAD1-215ENST00000515385 CRB3Q9BUF7 120 aa11.9□□□□□ -0.5
SMAD1-215ENST00000515385 PAPOLGQ9BWT3 736 aaKnown RBP11.9□□□□□ -0.5
SMAD1-215ENST00000515385 NIT2Q9NQR4 276 aa11.9□□□□□ -0.5
SMAD1-215ENST00000515385 SEMA4GQ9NTN9 838 aa11.9□□□□□ -0.5
SMAD1-215ENST00000515385 ACSS1Q9NUB1 689 aaPredicted RBP11.9□□□□□ -0.5
SMAD1-215ENST00000515385 AHSPQ9NZD4 102 aa11.9□□□□□ -0.5
SMAD1-215ENST00000515385 FCF1Q9Y324 198 aaKnown RBP11.9□□□□□ -0.5
SMAD1-215ENST00000515385 CBY1Q9Y3M2 126 aa11.9□□□□□ -0.5
SMAD1-215ENST00000515385 RFXAPO00287 272 aa11.9□□□□□ -0.51
SMAD1-215ENST00000515385 UBE2CO00762 179 aa11.9□□□□□ -0.51
SMAD1-215ENST00000515385 GOSR2O14653 212 aa11.9□□□□□ -0.51
SMAD1-215ENST00000515385 GNRH1P01148 92 aa11.9□□□□□ -0.51
SMAD1-215ENST00000515385 RAB40ALP0C0E4 278 aa11.9□□□□□ -0.51
SMAD1-215ENST00000515385 NDUFV2P19404 249 aa11.9□□□□□ -0.51
SMAD1-215ENST00000515385 NT5EP21589 574 aa11.9□□□□□ -0.51
SMAD1-215ENST00000515385 POU3F4P49335 361 aa11.9□□□□□ -0.51
SMAD1-215ENST00000515385 P2RY4P51582 365 aa11.9□□□□□ -0.51
SMAD1-215ENST00000515385 BPIFB3P59826 476 aa11.9□□□□□ -0.51
SMAD1-215ENST00000515385 UBE2IP63279 158 aaKnown RBP11.9□□□□□ -0.51
SMAD1-215ENST00000515385 LSM11P83369 360 aaKnown RBP eCLIP11.9□□□□□ -0.51
SMAD1-215ENST00000515385 DECR1Q16698 335 aa11.9□□□□□ -0.51
SMAD1-215ENST00000515385 ZNF620Q6ZNG0 422 aa11.9□□□□□ -0.51
SMAD1-215ENST00000515385 TPRG1Q6ZUI0 275 aa11.9□□□□□ -0.51
SMAD1-215ENST00000515385 ESPNLQ6ZVH7 1005 aa11.9□□□□□ -0.51
SMAD1-215ENST00000515385 TMPRSS11BQ86T26 416 aa11.9□□□□□ -0.51
SMAD1-215ENST00000515385 CBLN2Q8IUK8 224 aa11.9□□□□□ -0.51
SMAD1-215ENST00000515385 TMEM99Q8N816 258 aa11.9□□□□□ -0.51
SMAD1-215ENST00000515385 GPRC5AQ8NFJ5 357 aa11.9□□□□□ -0.51
SMAD1-215ENST00000515385 SVIPQ8NHG7 77 aa11.9□□□□□ -0.51
SMAD1-215ENST00000515385 RAB40AQ8WXH6 277 aa11.9□□□□□ -0.51
SMAD1-215ENST00000515385 WDR89Q96FK6 387 aaPredicted RBP11.9□□□□□ -0.51
SMAD1-215ENST00000515385 FAM46AQ96IP4 442 aaKnown RBP11.9□□□□□ -0.51
SMAD1-215ENST00000515385 MS4A4EQ96PG1 132 aa11.9□□□□□ -0.51
SMAD1-215ENST00000515385 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.9□□□□□ -0.51
SMAD1-215ENST00000515385 LINC00597Q9H2U6 94 aa11.9□□□□□ -0.51
SMAD1-215ENST00000515385 RNF122Q9H9V4 155 aa11.9□□□□□ -0.51
SMAD1-215ENST00000515385 SEBOXQ9HB31 216 aaPredicted RBP11.9□□□□□ -0.51
SMAD1-215ENST00000515385 KRCC1Q9NPI7 259 aaPredicted RBP11.9□□□□□ -0.51
SMAD1-215ENST00000515385 CNIH4Q9P003 139 aa11.9□□□□□ -0.51
SMAD1-215ENST00000515385 DYRK1BQ9Y463 629 aa11.9□□□□□ -0.51
SMAD1-215ENST00000515385 SLC22A31A6NKX4 558 aa11.89□□□□□ -0.51
SMAD1-215ENST00000515385 ZNF729A6NN14 1252 aaPredicted RBP11.89□□□□□ -0.51
SMAD1-215ENST00000515385 RDH16O75452 317 aa11.89□□□□□ -0.51
SMAD1-215ENST00000515385 TGFB1P01137 390 aa11.89□□□□□ -0.51
SMAD1-215ENST00000515385 CD1AP06126 327 aa11.89□□□□□ -0.51
SMAD1-215ENST00000515385 FBP1P09467 338 aa11.89□□□□□ -0.51
SMAD1-215ENST00000515385 UCHL1P09936 223 aa11.89□□□□□ -0.51
SMAD1-215ENST00000515385 C1GALT1C1LP0DN25 315 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms