RNA–Protein interactions for RNA: ENST00000513643.5

RNF4-221, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-221ENST00000513643 P2RX2Q9UBL9 471 aa8.7□□□□□ -1.02
RNF4-221ENST00000513643 DCTN4Q9UJW0 460 aa8.7□□□□□ -1.02
RNF4-221ENST00000513643 ING1Q9UK53 422 aaPredicted RBP8.7□□□□□ -1.02
RNF4-221ENST00000513643 CELSR1Q9NYQ6 3014 aa8.7□□□□□ -1.02
RNF4-221ENST00000513643 A0A0G2JPF8 293 aa8.69□□□□□ -1.02
RNF4-221ENST00000513643 HNRNPCL2B2RXH8 293 aa8.69□□□□□ -1.02
RNF4-221ENST00000513643 HNRNPCL3B7ZW38 293 aa8.69□□□□□ -1.02
RNF4-221ENST00000513643 EIF1AYO14602 144 aaKnown RBP8.69□□□□□ -1.02
RNF4-221ENST00000513643 MSTNO14793 375 aa8.69□□□□□ -1.02
RNF4-221ENST00000513643 SEC14L5O43304 696 aa8.69□□□□□ -1.02
RNF4-221ENST00000513643 CXCL13O43927 109 aa8.69□□□□□ -1.02
RNF4-221ENST00000513643 HNRNPCL1O60812 293 aaKnown RBP8.69□□□□□ -1.02
RNF4-221ENST00000513643 SS18L1O75177 396 aaPredicted RBP8.69□□□□□ -1.02
RNF4-221ENST00000513643 DBIP07108 87 aaKnown RBP8.69□□□□□ -1.02
RNF4-221ENST00000513643 THBS1P07996 1170 aa8.69□□□□□ -1.02
RNF4-221ENST00000513643 UBTFL6P0CB48 400 aaPredicted RBP8.69□□□□□ -1.02
RNF4-221ENST00000513643 HNRNPCL4P0DMR1 293 aa8.69□□□□□ -1.02
RNF4-221ENST00000513643 NR2F1P10589 423 aa8.69□□□□□ -1.02
RNF4-221ENST00000513643 PGCP20142 388 aa8.69□□□□□ -1.02
RNF4-221ENST00000513643 ACAA2P42765 397 aaKnown RBP8.69□□□□□ -1.02
RNF4-221ENST00000513643 CRATP43155 626 aa8.69□□□□□ -1.02
RNF4-221ENST00000513643 CRISP3P54108 245 aa8.69□□□□□ -1.02
RNF4-221ENST00000513643 CARD18P57730 90 aa8.69□□□□□ -1.02
RNF4-221ENST00000513643 KRTAP10-9P60411 292 aa8.69□□□□□ -1.02
RNF4-221ENST00000513643 GUCY1A3Q02108 690 aa8.69□□□□□ -1.02
RNF4-221ENST00000513643 EPS8Q12929 822 aa8.69□□□□□ -1.02
RNF4-221ENST00000513643 SELENBP1Q13228 472 aa8.69□□□□□ -1.02
RNF4-221ENST00000513643 DAZAP2Q15038 168 aaPredicted RBP8.69□□□□□ -1.02
RNF4-221ENST00000513643 ZSWIM7Q19AV6 140 aa8.69□□□□□ -1.02
RNF4-221ENST00000513643 C6orf10Q5SRN2 563 aa8.69□□□□□ -1.02
RNF4-221ENST00000513643 RNF220Q5VTB9 566 aa8.69□□□□□ -1.02
RNF4-221ENST00000513643 ZNF474Q6S9Z5 364 aaPredicted RBP8.69□□□□□ -1.02
RNF4-221ENST00000513643 PLEKHM3Q6ZWE6 761 aa8.69□□□□□ -1.02
RNF4-221ENST00000513643 FAM214BQ7L5A3 538 aa8.69□□□□□ -1.02
RNF4-221ENST00000513643 GDF7Q7Z4P5 450 aa8.69□□□□□ -1.02
RNF4-221ENST00000513643 BTLAQ7Z6A9 289 aa8.69□□□□□ -1.02
RNF4-221ENST00000513643 ADGRG3Q86Y34 549 aa8.69□□□□□ -1.02
RNF4-221ENST00000513643 GCNT2Q8N0V5 402 aa8.69□□□□□ -1.02
RNF4-221ENST00000513643 RNF128Q8TEB7 428 aa8.69□□□□□ -1.02
RNF4-221ENST00000513643 SLC35B4Q969S0 331 aa8.69□□□□□ -1.02
RNF4-221ENST00000513643 THOC1Q96FV9 657 aaKnown RBP8.69□□□□□ -1.02
RNF4-221ENST00000513643 TMEM19Q96HH6 336 aa8.69□□□□□ -1.02
RNF4-221ENST00000513643 SRXN1Q9BYN0 137 aa8.69□□□□□ -1.02
RNF4-221ENST00000513643 TMEM38AQ9H6F2 299 aa8.69□□□□□ -1.02
RNF4-221ENST00000513643 MCCC2Q9HCC0 563 aa8.69□□□□□ -1.02
RNF4-221ENST00000513643 GP6Q9HCN6 339 aa8.69□□□□□ -1.02
RNF4-221ENST00000513643 GLRX2Q9NS18 164 aa8.69□□□□□ -1.02
RNF4-221ENST00000513643 FGFR1OP2Q9NVK5 253 aa8.69□□□□□ -1.02
RNF4-221ENST00000513643 CALML5Q9NZT1 146 aa8.69□□□□□ -1.02
RNF4-221ENST00000513643 PACSIN3Q9UKS6 424 aa8.69□□□□□ -1.02
RNF4-221ENST00000513643 TRIM33Q9UPN9 1127 aa8.69□□□□□ -1.02
RNF4-221ENST00000513643 UQCRHLA0A096LP55 91 aa8.68□□□□□ -1.02
RNF4-221ENST00000513643 A0A0G2JND7 137 aa8.68□□□□□ -1.02
RNF4-221ENST00000513643 GJE1A6NN92 205 aa8.68□□□□□ -1.02
RNF4-221ENST00000513643 NR5A2O00482 541 aa8.68□□□□□ -1.02
RNF4-221ENST00000513643 FBP2O00757 339 aa8.68□□□□□ -1.02
RNF4-221ENST00000513643 TNFSF11O14788 317 aa8.68□□□□□ -1.02
RNF4-221ENST00000513643 PGM3O95394 542 aa8.68□□□□□ -1.02
RNF4-221ENST00000513643 ANP32DO95626 131 aa8.68□□□□□ -1.02
RNF4-221ENST00000513643 OPN1LWP04000 364 aa8.68□□□□□ -1.02
RNF4-221ENST00000513643 SNRPB2P08579 225 aaKnown RBP8.68□□□□□ -1.02
RNF4-221ENST00000513643 ARAFP10398 606 aa8.68□□□□□ -1.02
RNF4-221ENST00000513643 FCGR2AP12318 317 aa8.68□□□□□ -1.02
RNF4-221ENST00000513643 ETS2P15036 469 aa8.68□□□□□ -1.02
RNF4-221ENST00000513643 PPIBP23284 216 aaKnown RBP8.68□□□□□ -1.02
RNF4-221ENST00000513643 FKBP2P26885 142 aaKnown RBP8.68□□□□□ -1.02
RNF4-221ENST00000513643 MDH1P40925 334 aaKnown RBP8.68□□□□□ -1.02
RNF4-221ENST00000513643 APOBEC1P41238 236 aaKnown RBP8.68□□□□□ -1.02
RNF4-221ENST00000513643 EIF1AXP47813 144 aaKnown RBP8.68□□□□□ -1.02
RNF4-221ENST00000513643 CLK1P49759 484 aaKnown RBP8.68□□□□□ -1.02
RNF4-221ENST00000513643 GZMMP51124 257 aa8.68□□□□□ -1.02
RNF4-221ENST00000513643 MAP2K6P52564 334 aa8.68□□□□□ -1.02
RNF4-221ENST00000513643 RAC3P60763 192 aa8.68□□□□□ -1.02
RNF4-221ENST00000513643 ZNF239Q16600 458 aaKnown RBP8.68□□□□□ -1.02
RNF4-221ENST00000513643 TMEM176BQ3YBM2 270 aaPredicted RBP8.68□□□□□ -1.02
RNF4-221ENST00000513643 MRPL2Q5T653 305 aaKnown RBP8.68□□□□□ -1.02
RNF4-221ENST00000513643 HBMQ6B0K9 141 aa8.68□□□□□ -1.02
RNF4-221ENST00000513643 VWA1Q6PCB0 445 aa8.68□□□□□ -1.02
RNF4-221ENST00000513643 CHMP1BQ7LBR1 199 aa8.68□□□□□ -1.02
RNF4-221ENST00000513643 GRINAQ7Z429 371 aa8.68□□□□□ -1.02
RNF4-221ENST00000513643 HMGN2P46Q86SG4 172 aa8.68□□□□□ -1.02
RNF4-221ENST00000513643 VRK2Q86Y07 508 aa8.68□□□□□ -1.02
RNF4-221ENST00000513643 CLIP4Q8N3C7 705 aa8.68□□□□□ -1.02
RNF4-221ENST00000513643 ZNF614Q8N883 585 aa8.68□□□□□ -1.02
RNF4-221ENST00000513643 OR52P1PQ8NH57 321 aa8.68□□□□□ -1.02
RNF4-221ENST00000513643 FAM222BQ8WU58 562 aa8.68□□□□□ -1.02
RNF4-221ENST00000513643 TMEM234Q8WY98 164 aa8.68□□□□□ -1.02
RNF4-221ENST00000513643 MAL2Q969L2 176 aa8.68□□□□□ -1.02
RNF4-221ENST00000513643 CPNE4Q96A23 557 aaPredicted RBP8.68□□□□□ -1.02
RNF4-221ENST00000513643 GMPPAQ96IJ6 420 aaPredicted RBP8.68□□□□□ -1.02
RNF4-221ENST00000513643 ANKRD27Q96NW4 1050 aa8.68□□□□□ -1.02
RNF4-221ENST00000513643 CPPED1Q9BRF8 314 aaPredicted RBP8.68□□□□□ -1.02
RNF4-221ENST00000513643 TMEM120AQ9BXJ8 343 aa8.68□□□□□ -1.02
RNF4-221ENST00000513643 RAD21L1Q9H4I0 556 aa8.68□□□□□ -1.02
RNF4-221ENST00000513643 TMEM185BQ9H7F4 350 aa8.68□□□□□ -1.02
RNF4-221ENST00000513643 SAR1AQ9NR31 198 aa8.68□□□□□ -1.02
RNF4-221ENST00000513643 RLIMQ9NVW2 624 aa8.68□□□□□ -1.02
RNF4-221ENST00000513643 CRIM1Q9NZV1 1036 aa8.68□□□□□ -1.02
RNF4-221ENST00000513643 LEF1Q9UJU2 399 aaPredicted RBP8.68□□□□□ -1.02
RNF4-221ENST00000513643 AP3D1O14617 1153 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms