RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 JAM3Q9BX67 310 aa7.68□□□□□ -1.18
RNF4-220ENST00000513578 DSN1Q9H410 356 aa7.68□□□□□ -1.18
RNF4-220ENST00000513578 RXFP3Q9NSD7 469 aa7.68□□□□□ -1.18
RNF4-220ENST00000513578 TBC1D23Q9NUY8 699 aa7.68□□□□□ -1.18
RNF4-220ENST00000513578 GPR83Q9NYM4 423 aa7.68□□□□□ -1.18
RNF4-220ENST00000513578 SELENONQ9NZV5 590 aa7.68□□□□□ -1.18
RNF4-220ENST00000513578 RPS6KB2Q9UBS0 482 aa7.68□□□□□ -1.18
RNF4-220ENST00000513578 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.68□□□□□ -1.18
RNF4-220ENST00000513578 DIMT1Q9UNQ2 313 aaKnown RBP7.68□□□□□ -1.18
RNF4-220ENST00000513578 SIGLEC7Q9Y286 467 aa7.68□□□□□ -1.18
RNF4-220ENST00000513578 PCDHGB6Q9Y5F9 930 aa7.68□□□□□ -1.18
RNF4-220ENST00000513578 FLNBO75369 2602 aaKnown RBP7.67□□□□□ -1.18
RNF4-220ENST00000513578 CFAP47Q6ZTR5 3102 aa7.67□□□□□ -1.18
RNF4-220ENST00000513578 A0A1W2PQ72 361 aa7.67□□□□□ -1.18
RNF4-220ENST00000513578 EFCAB9A8MZ26 197 aa7.67□□□□□ -1.18
RNF4-220ENST00000513578 BHLHE40O14503 412 aa7.67□□□□□ -1.18
RNF4-220ENST00000513578 SLC22A1O15245 554 aa7.67□□□□□ -1.18
RNF4-220ENST00000513578 TLX2O43763 284 aaPredicted RBP7.67□□□□□ -1.18
RNF4-220ENST00000513578 FADS1O60427 444 aa7.67□□□□□ -1.18
RNF4-220ENST00000513578 CNOT3O75175 753 aaKnown RBP7.67□□□□□ -1.18
RNF4-220ENST00000513578 REM1O75628 298 aa7.67□□□□□ -1.18
RNF4-220ENST00000513578 ATE1O95260 518 aa7.67□□□□□ -1.18
RNF4-220ENST00000513578 FADS2O95864 444 aaKnown RBP7.67□□□□□ -1.18
RNF4-220ENST00000513578 KLK3P07288 261 aaPredicted RBP7.67□□□□□ -1.18
RNF4-220ENST00000513578 HPGDP15428 266 aa7.67□□□□□ -1.18
RNF4-220ENST00000513578 BMP7P18075 431 aa7.67□□□□□ -1.18
RNF4-220ENST00000513578 CCNA2P20248 432 aa7.67□□□□□ -1.18
RNF4-220ENST00000513578 ABCD3P28288 659 aa7.67□□□□□ -1.18
RNF4-220ENST00000513578 PCSK6P29122 969 aa7.67□□□□□ -1.18
RNF4-220ENST00000513578 IL12BP29460 328 aa7.67□□□□□ -1.18
RNF4-220ENST00000513578 C21orf33P30042 268 aaPredicted RBP7.67□□□□□ -1.18
RNF4-220ENST00000513578 TGFBR2P37173 567 aa7.67□□□□□ -1.18
RNF4-220ENST00000513578 NR0B1P51843 470 aaKnown RBP7.67□□□□□ -1.18
RNF4-220ENST00000513578 NUDT6P53370 316 aa7.67□□□□□ -1.18
RNF4-220ENST00000513578 GAS1P54826 345 aa7.67□□□□□ -1.18
RNF4-220ENST00000513578 DLX5P56178 289 aa7.67□□□□□ -1.18
RNF4-220ENST00000513578 NRG3P56975 720 aa7.67□□□□□ -1.18
RNF4-220ENST00000513578 FXYD6P3P58550 94 aa7.67□□□□□ -1.18
RNF4-220ENST00000513578 E2F1Q01094 437 aa7.67□□□□□ -1.18
RNF4-220ENST00000513578 ZNF91Q05481 1191 aa7.67□□□□□ -1.18
RNF4-220ENST00000513578 RAB40BQ12829 278 aa7.67□□□□□ -1.18
RNF4-220ENST00000513578 FOXD4Q12950 439 aaPredicted RBP7.67□□□□□ -1.18
RNF4-220ENST00000513578 NNATQ16517 81 aa7.67□□□□□ -1.18
RNF4-220ENST00000513578 CTF1Q16619 201 aa7.67□□□□□ -1.18
RNF4-220ENST00000513578 ISXQ2M1V0 245 aa7.67□□□□□ -1.18
RNF4-220ENST00000513578 C3orf38Q5JPI3 329 aa7.67□□□□□ -1.18
RNF4-220ENST00000513578 ARMC4Q5T2S8 1044 aa7.67□□□□□ -1.18
RNF4-220ENST00000513578 NXNL2Q5VZ03 156 aa7.67□□□□□ -1.18
RNF4-220ENST00000513578 C19orf48Q6RUI8 117 aa7.67□□□□□ -1.18
RNF4-220ENST00000513578 SMARCD3Q6STE5 483 aa7.67□□□□□ -1.18
RNF4-220ENST00000513578 APOOLQ6UXV4 268 aa7.67□□□□□ -1.18
RNF4-220ENST00000513578 HSDL2Q6YN16 418 aa7.67□□□□□ -1.18
RNF4-220ENST00000513578 RTL4Q6ZR62 310 aa7.67□□□□□ -1.18
RNF4-220ENST00000513578 LANCL3Q6ZV70 420 aa7.67□□□□□ -1.18
RNF4-220ENST00000513578 CPEB2Q7Z5Q1 589 aaKnown RBP7.67□□□□□ -1.18
RNF4-220ENST00000513578 ATG4DQ86TL0 474 aaPredicted RBP7.67□□□□□ -1.18
RNF4-220ENST00000513578 IQCF1Q8N6M8 205 aa7.67□□□□□ -1.18
RNF4-220ENST00000513578 ZNF614Q8N883 585 aa7.67□□□□□ -1.18
RNF4-220ENST00000513578 ANKK1Q8NFD2 765 aa7.67□□□□□ -1.18
RNF4-220ENST00000513578 PROKR2Q8NFJ6 384 aa7.67□□□□□ -1.18
RNF4-220ENST00000513578 OR52L1Q8NGH7 329 aa7.67□□□□□ -1.18
RNF4-220ENST00000513578 OR5L2Q8NGL0 311 aa7.67□□□□□ -1.18
RNF4-220ENST00000513578 PFN4Q8NHR9 129 aa7.67□□□□□ -1.18
RNF4-220ENST00000513578 RFKQ969G6 155 aa7.67□□□□□ -1.18
RNF4-220ENST00000513578 OMA1Q96E52 524 aa7.67□□□□□ -1.18
RNF4-220ENST00000513578 ARSGQ96EG1 525 aa7.67□□□□□ -1.18
RNF4-220ENST00000513578 IL4I1Q96RQ9 567 aa7.67□□□□□ -1.18
RNF4-220ENST00000513578 LMF1Q96S06 567 aa7.67□□□□□ -1.18
RNF4-220ENST00000513578 LPAR4Q99677 370 aa7.67□□□□□ -1.18
RNF4-220ENST00000513578 ZPBPQ9BS86 351 aa7.67□□□□□ -1.18
RNF4-220ENST00000513578 ADAM19Q9H013 955 aa7.67□□□□□ -1.18
RNF4-220ENST00000513578 OR52D1Q9H346 318 aa7.67□□□□□ -1.18
RNF4-220ENST00000513578 UBQLN3Q9H347 655 aa7.67□□□□□ -1.18
RNF4-220ENST00000513578 SYNDIG1Q9H7V2 258 aa7.67□□□□□ -1.18
RNF4-220ENST00000513578 HHATLQ9HCP6 504 aa7.67□□□□□ -1.18
RNF4-220ENST00000513578 APMAPQ9HDC9 416 aa7.67□□□□□ -1.18
RNF4-220ENST00000513578 TIMMDC1Q9NPL8 285 aa7.67□□□□□ -1.18
RNF4-220ENST00000513578 C20orf141Q9NUB4 165 aa7.67□□□□□ -1.18
RNF4-220ENST00000513578 EXOGQ9Y2C4 368 aaKnown RBP7.67□□□□□ -1.18
RNF4-220ENST00000513578 PCNX3Q9H6A9 2034 aa7.66□□□□□ -1.18
RNF4-220ENST00000513578 KIF26BQ2KJY2 2108 aa7.66□□□□□ -1.18
RNF4-220ENST00000513578 LNP1A1A4G5 178 aa7.66□□□□□ -1.18
RNF4-220ENST00000513578 VGLL3A8MV65 326 aa7.66□□□□□ -1.18
RNF4-220ENST00000513578 M0R082 166 aa7.66□□□□□ -1.18
RNF4-220ENST00000513578 M0R129 80 aa7.66□□□□□ -1.18
RNF4-220ENST00000513578 GTPBP1O00178 669 aaKnown RBP7.66□□□□□ -1.18
RNF4-220ENST00000513578 ADAM10O14672 748 aa7.66□□□□□ -1.18
RNF4-220ENST00000513578 CDC40O60508 579 aaKnown RBP eCLIP7.66□□□□□ -1.18
RNF4-220ENST00000513578 ICOSLGO75144 302 aa7.66□□□□□ -1.18
RNF4-220ENST00000513578 RFPL3O75679 317 aa7.66□□□□□ -1.18
RNF4-220ENST00000513578 NADKO95544 446 aaPredicted RBP7.66□□□□□ -1.18
RNF4-220ENST00000513578 NTN1O95631 604 aa7.66□□□□□ -1.18
RNF4-220ENST00000513578 IGHEP01854 428 aa7.66□□□□□ -1.18
RNF4-220ENST00000513578 LCKP06239 509 aa7.66□□□□□ -1.18
RNF4-220ENST00000513578 ZNF806P0C7X5 589 aa7.66□□□□□ -1.18
RNF4-220ENST00000513578 ADORA3P0DMS8 318 aa7.66□□□□□ -1.18
RNF4-220ENST00000513578 CD59P13987 128 aa7.66□□□□□ -1.18
RNF4-220ENST00000513578 SLC6A6P31641 620 aa7.66□□□□□ -1.18
RNF4-220ENST00000513578 SLC1A3P43003 542 aa7.66□□□□□ -1.18
RNF4-220ENST00000513578 LIMK1P53667 647 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms