RNA–Protein interactions for RNA: ENST00000512340.5

NR1I3-231, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 891 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-231ENST00000512340 LDLRP01130 860 aa6.76□□□□□ -1.33
NR1I3-231ENST00000512340 CRHP06850 196 aa6.76□□□□□ -1.33
NR1I3-231ENST00000512340 NPIPA8P0DM63 369 aa6.76□□□□□ -1.33
NR1I3-231ENST00000512340 ARAFP10398 606 aa6.76□□□□□ -1.33
NR1I3-231ENST00000512340 COX4I1P13073 169 aa6.76□□□□□ -1.33
NR1I3-231ENST00000512340 DRD4P21917 467 aa6.76□□□□□ -1.33
NR1I3-231ENST00000512340 TCEA1P23193 301 aaKnown RBP6.76□□□□□ -1.33
NR1I3-231ENST00000512340 OPRM1P35372 400 aa6.76□□□□□ -1.33
NR1I3-231ENST00000512340 TIMP3P35625 211 aa6.76□□□□□ -1.33
NR1I3-231ENST00000512340 APOBEC1P41238 236 aaKnown RBP6.76□□□□□ -1.33
NR1I3-231ENST00000512340 SEC24CP53992 1094 aa6.76□□□□□ -1.33
NR1I3-231ENST00000512340 GFRA1P56159 465 aa6.76□□□□□ -1.33
NR1I3-231ENST00000512340 ARPC4P59998 168 aa6.76□□□□□ -1.33
NR1I3-231ENST00000512340 CSNK2A1P68400 391 aaPredicted RBP6.76□□□□□ -1.33
NR1I3-231ENST00000512340 CTAG1AP78358 180 aa6.76□□□□□ -1.33
NR1I3-231ENST00000512340 MXRA7P84157 204 aa6.76□□□□□ -1.33
NR1I3-231ENST00000512340 ZNF117Q03924 483 aa6.76□□□□□ -1.33
NR1I3-231ENST00000512340 PMPCAQ10713 525 aa6.76□□□□□ -1.33
NR1I3-231ENST00000512340 MERTKQ12866 999 aa6.76□□□□□ -1.33
NR1I3-231ENST00000512340 COX10Q12887 443 aa6.76□□□□□ -1.33
NR1I3-231ENST00000512340 DYNC1I2Q13409 638 aaKnown RBP6.76□□□□□ -1.33
NR1I3-231ENST00000512340 SCARB2Q14108 478 aa6.76□□□□□ -1.33
NR1I3-231ENST00000512340 QPRTQ15274 297 aa6.76□□□□□ -1.33
NR1I3-231ENST00000512340 SLC25A35Q3KQZ1 300 aa6.76□□□□□ -1.33
NR1I3-231ENST00000512340 PAGE3Q5JUK9 113 aa6.76□□□□□ -1.33
NR1I3-231ENST00000512340 COX20Q5RI15 118 aa6.76□□□□□ -1.33
NR1I3-231ENST00000512340 RNF220Q5VTB9 566 aa6.76□□□□□ -1.33
NR1I3-231ENST00000512340 NSUN5P2Q63ZY6 315 aa6.76□□□□□ -1.33
NR1I3-231ENST00000512340 C3orf33Q6P1S2 294 aa6.76□□□□□ -1.33
NR1I3-231ENST00000512340 APOOLQ6UXV4 268 aa6.76□□□□□ -1.33
NR1I3-231ENST00000512340 ESPNLQ6ZVH7 1005 aa6.76□□□□□ -1.33
NR1I3-231ENST00000512340 GRINAQ7Z429 371 aa6.76□□□□□ -1.33
NR1I3-231ENST00000512340 RANBP3LQ86VV4 465 aaPredicted RBP6.76□□□□□ -1.33
NR1I3-231ENST00000512340 ARMC8Q8IUR7 673 aa6.76□□□□□ -1.33
NR1I3-231ENST00000512340 UBQLNLQ8IYU4 475 aa6.76□□□□□ -1.33
NR1I3-231ENST00000512340 GPR119Q8TDV5 335 aa6.76□□□□□ -1.33
NR1I3-231ENST00000512340 SMPDL3BQ92485 455 aa6.76□□□□□ -1.33
NR1I3-231ENST00000512340 WNT2BQ93097 391 aa6.76□□□□□ -1.33
NR1I3-231ENST00000512340 SDCCAG3Q96C92 435 aa6.76□□□□□ -1.33
NR1I3-231ENST00000512340 AURKBQ96GD4 344 aaPredicted RBP6.76□□□□□ -1.33
NR1I3-231ENST00000512340 WDYHV1Q96HA8 205 aa6.76□□□□□ -1.33
NR1I3-231ENST00000512340 CCDC120Q96HB5 630 aa6.76□□□□□ -1.33
NR1I3-231ENST00000512340 TRIB1Q96RU8 372 aa6.76□□□□□ -1.33
NR1I3-231ENST00000512340 CPPED1Q9BRF8 314 aaPredicted RBP6.76□□□□□ -1.33
NR1I3-231ENST00000512340 TTYH2Q9BSA4 534 aa6.76□□□□□ -1.33
NR1I3-231ENST00000512340 SLC38A1Q9H2H9 487 aa6.76□□□□□ -1.33
NR1I3-231ENST00000512340 SERHL2Q9H4I8 314 aa6.76□□□□□ -1.33
NR1I3-231ENST00000512340 KCNJ16Q9NPI9 418 aa6.76□□□□□ -1.33
NR1I3-231ENST00000512340 GLRX2Q9NS18 164 aa6.76□□□□□ -1.33
NR1I3-231ENST00000512340 FBXO34Q9NWN3 711 aa6.76□□□□□ -1.33
NR1I3-231ENST00000512340 FLRT3Q9NZU0 649 aa6.76□□□□□ -1.33
NR1I3-231ENST00000512340 VAPAQ9P0L0 249 aa6.76□□□□□ -1.33
NR1I3-231ENST00000512340 ICAM5Q9UMF0 924 aa6.76□□□□□ -1.33
NR1I3-231ENST00000512340 ZNF175Q9Y473 711 aa6.76□□□□□ -1.33
NR1I3-231ENST00000512340 KLF2Q9Y5W3 355 aaPredicted RBP6.76□□□□□ -1.33
NR1I3-231ENST00000512340 LIPGQ9Y5X9 500 aa6.76□□□□□ -1.33
NR1I3-231ENST00000512340 CENPEQ02224 2701 aa6.76□□□□□ -1.33
NR1I3-231ENST00000512340 ANKRD17O75179 2603 aaKnown RBP6.76□□□□□ -1.33
NR1I3-231ENST00000512340 TNFSF12-TNFSF13A0A0A6YY99 330 aa6.75□□□□□ -1.33
NR1I3-231ENST00000512340 SLC22A20A6NK97 555 aa6.75□□□□□ -1.33
NR1I3-231ENST00000512340 FAAHO00519 579 aa6.75□□□□□ -1.33
NR1I3-231ENST00000512340 EIF1AYO14602 144 aaKnown RBP6.75□□□□□ -1.33
NR1I3-231ENST00000512340 AIM2O14862 343 aa6.75□□□□□ -1.33
NR1I3-231ENST00000512340 SEC14L5O43304 696 aa6.75□□□□□ -1.33
NR1I3-231ENST00000512340 ZG16O60844 167 aa6.75□□□□□ -1.33
NR1I3-231ENST00000512340 CLDN14O95500 239 aa6.75□□□□□ -1.33
NR1I3-231ENST00000512340 STAMBPO95630 424 aa6.75□□□□□ -1.33
NR1I3-231ENST00000512340 CHRM4P08173 479 aa6.75□□□□□ -1.33
NR1I3-231ENST00000512340 TFPIP10646 304 aa6.75□□□□□ -1.33
NR1I3-231ENST00000512340 ZNF708P17019 499 aa6.75□□□□□ -1.33
NR1I3-231ENST00000512340 CXCR1P25024 350 aa6.75□□□□□ -1.33
NR1I3-231ENST00000512340 PRKAR1BP31321 381 aa6.75□□□□□ -1.33
NR1I3-231ENST00000512340 RYKP34925 604 aa6.75□□□□□ -1.33
NR1I3-231ENST00000512340 PGM1P36871 562 aa6.75□□□□□ -1.33
NR1I3-231ENST00000512340 EIF1AXP47813 144 aaKnown RBP6.75□□□□□ -1.33
NR1I3-231ENST00000512340 POLR2HP52434 150 aaKnown RBP6.75□□□□□ -1.33
NR1I3-231ENST00000512340 CTBP2P56545 445 aa6.75□□□□□ -1.33
NR1I3-231ENST00000512340 CARD18P57730 90 aa6.75□□□□□ -1.33
NR1I3-231ENST00000512340 SKP2Q13309 424 aa6.75□□□□□ -1.33
NR1I3-231ENST00000512340 CD226Q15762 336 aa6.75□□□□□ -1.33
NR1I3-231ENST00000512340 PLPPR5Q32ZL2 321 aa6.75□□□□□ -1.33
NR1I3-231ENST00000512340 GTDC1Q4AE62 458 aa6.75□□□□□ -1.33
NR1I3-231ENST00000512340 ACSF3Q4G176 576 aaPredicted RBP6.75□□□□□ -1.33
NR1I3-231ENST00000512340 MRPL2Q5T653 305 aaKnown RBP6.75□□□□□ -1.33
NR1I3-231ENST00000512340 HBMQ6B0K9 141 aa6.75□□□□□ -1.33
NR1I3-231ENST00000512340 REP15Q6BDI9 236 aa6.75□□□□□ -1.33
NR1I3-231ENST00000512340 NANOGP8Q6NSW7 305 aa6.75□□□□□ -1.33
NR1I3-231ENST00000512340 CGB2Q6NT52 195 aa6.75□□□□□ -1.33
NR1I3-231ENST00000512340 PPP4R4Q6NUP7 873 aa6.75□□□□□ -1.33
NR1I3-231ENST00000512340 ARSKQ6UWY0 536 aa6.75□□□□□ -1.33
NR1I3-231ENST00000512340 DLEU7Q6UYE1 221 aa6.75□□□□□ -1.33
NR1I3-231ENST00000512340 HACD2Q6Y1H2 254 aa6.75□□□□□ -1.33
NR1I3-231ENST00000512340 C3P1Q6ZMU1 363 aa6.75□□□□□ -1.33
NR1I3-231ENST00000512340 MAMDC2Q7Z304 686 aaPredicted RBP6.75□□□□□ -1.33
NR1I3-231ENST00000512340 ZAR1Q86SH2 424 aa6.75□□□□□ -1.33
NR1I3-231ENST00000512340 LILRA2Q8N149 483 aa6.75□□□□□ -1.33
NR1I3-231ENST00000512340 CCDC197Q8NCU1 140 aa6.75□□□□□ -1.33
NR1I3-231ENST00000512340 OR10A6Q8NH74 314 aa6.75□□□□□ -1.33
NR1I3-231ENST00000512340 FBXO27Q8NI29 283 aa6.75□□□□□ -1.33
NR1I3-231ENST00000512340 NFKBIDQ8NI38 313 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms