RNA–Protein interactions for RNA: ENST00000511153.5

PROM1-211, Transcript of prominin 1, humanhuman

TSL 1 (best)

Gene PROM1, Length 1,595 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-211ENST00000511153 C15orf41Q9Y2V0 281 aa4.91□□□□□ -1.62
PROM1-211ENST00000511153 SNX13Q9Y5W8 968 aa4.91□□□□□ -1.62
PROM1-211ENST00000511153 SHANK1Q9Y566 2161 aa4.9□□□□□ -1.62
PROM1-211ENST00000511153 FAM208BQ5VWN6 2430 aa4.9□□□□□ -1.63
PROM1-211ENST00000511153 A0A1B0GTH9 108 aa4.9□□□□□ -1.63
PROM1-211ENST00000511153 TTC36A6NLP5 189 aa4.9□□□□□ -1.63
PROM1-211ENST00000511153 ALG1L2C9J202 215 aa4.9□□□□□ -1.63
PROM1-211ENST00000511153 NPIPB9F8W1W9 429 aa4.9□□□□□ -1.63
PROM1-211ENST00000511153 H3BNH8 94 aa4.9□□□□□ -1.63
PROM1-211ENST00000511153 KPNA4O00629 521 aaPredicted RBP4.9□□□□□ -1.63
PROM1-211ENST00000511153 ZNF264O43296 627 aa4.9□□□□□ -1.63
PROM1-211ENST00000511153 PEX14O75381 377 aa4.9□□□□□ -1.63
PROM1-211ENST00000511153 TRIM3O75382 744 aaPredicted RBP4.9□□□□□ -1.63
PROM1-211ENST00000511153 PRKD3O94806 890 aa4.9□□□□□ -1.63
PROM1-211ENST00000511153 NPPAP01160 153 aa4.9□□□□□ -1.63
PROM1-211ENST00000511153 IFI6P09912 130 aa4.9□□□□□ -1.63
PROM1-211ENST00000511153 NAGAP17050 411 aa4.9□□□□□ -1.63
PROM1-211ENST00000511153 KLK2P20151 261 aa4.9□□□□□ -1.63
PROM1-211ENST00000511153 CD247P20963 164 aa4.9□□□□□ -1.63
PROM1-211ENST00000511153 RPS4Y1P22090 263 aaKnown RBP4.9□□□□□ -1.63
PROM1-211ENST00000511153 ME2P23368 584 aa4.9□□□□□ -1.63
PROM1-211ENST00000511153 HTR2AP28223 471 aa4.9□□□□□ -1.63
PROM1-211ENST00000511153 SFTPDP35247 375 aa4.9□□□□□ -1.63
PROM1-211ENST00000511153 ZNF41P51814 821 aaPredicted RBP4.9□□□□□ -1.63
PROM1-211ENST00000511153 PCBP3P57721 371 aaKnown RBP4.9□□□□□ -1.63
PROM1-211ENST00000511153 EEF1A1P68104 462 aaKnown RBP4.9□□□□□ -1.63
PROM1-211ENST00000511153 GABPB1Q06547 395 aaPredicted RBP4.9□□□□□ -1.63
PROM1-211ENST00000511153 C19orf57Q0VDD7 668 aa4.9□□□□□ -1.63
PROM1-211ENST00000511153 MERTKQ12866 999 aa4.9□□□□□ -1.63
PROM1-211ENST00000511153 SKP2Q13309 424 aa4.9□□□□□ -1.63
PROM1-211ENST00000511153 FGFBP1Q14512 234 aa4.9□□□□□ -1.63
PROM1-211ENST00000511153 GANABQ14697 944 aaKnown RBP4.9□□□□□ -1.63
PROM1-211ENST00000511153 LARS2Q15031 903 aaKnown RBP4.9□□□□□ -1.63
PROM1-211ENST00000511153 NPTX1Q15818 432 aa4.9□□□□□ -1.63
PROM1-211ENST00000511153 ZNF141Q15928 474 aa4.9□□□□□ -1.63
PROM1-211ENST00000511153 ZSCAN26Q16670 478 aa4.9□□□□□ -1.63
PROM1-211ENST00000511153 DNAL1Q4LDG9 190 aa4.9□□□□□ -1.63
PROM1-211ENST00000511153 LIN52Q52LA3 116 aa4.9□□□□□ -1.63
PROM1-211ENST00000511153 CMPK2Q5EBM0 449 aa4.9□□□□□ -1.63
PROM1-211ENST00000511153 TIGD3Q6B0B8 471 aa4.9□□□□□ -1.63
PROM1-211ENST00000511153 SLC30A6Q6NXT4 461 aa4.9□□□□□ -1.63
PROM1-211ENST00000511153 IGFL3Q6UXB1 125 aa4.9□□□□□ -1.63
PROM1-211ENST00000511153 TRILQ7L0X0 811 aa4.9□□□□□ -1.63
PROM1-211ENST00000511153 EIF3MQ7L2H7 374 aaKnown RBP4.9□□□□□ -1.63
PROM1-211ENST00000511153 SPATA24Q86W54 205 aa4.9□□□□□ -1.63
PROM1-211ENST00000511153 DHFR2Q86XF0 187 aa4.9□□□□□ -1.63
PROM1-211ENST00000511153 GPALPP1Q8IXQ4 340 aa4.9□□□□□ -1.63
PROM1-211ENST00000511153 ZNF843Q8N446 348 aa4.9□□□□□ -1.63
PROM1-211ENST00000511153 FAM83FQ8NEG4 500 aaPredicted RBP4.9□□□□□ -1.63
PROM1-211ENST00000511153 BHLHE22Q8NFJ8 381 aaPredicted RBP4.9□□□□□ -1.63
PROM1-211ENST00000511153 OR6T1Q8NGN1 323 aa4.9□□□□□ -1.63
PROM1-211ENST00000511153 CPT1CQ8TCG5 803 aa4.9□□□□□ -1.63
PROM1-211ENST00000511153 UTP4Q969X6 686 aaKnown RBP4.9□□□□□ -1.63
PROM1-211ENST00000511153 C1GALT1C1Q96EU7 318 aa4.9□□□□□ -1.63
PROM1-211ENST00000511153 NSMCE2Q96MF7 247 aa4.9□□□□□ -1.63
PROM1-211ENST00000511153 RNF145Q96MT1 663 aa4.9□□□□□ -1.63
PROM1-211ENST00000511153 SFXN2Q96NB2 322 aa4.9□□□□□ -1.63
PROM1-211ENST00000511153 HOXD1Q9GZZ0 328 aa4.9□□□□□ -1.63
PROM1-211ENST00000511153 RNF32Q9H0A6 362 aa4.9□□□□□ -1.63
PROM1-211ENST00000511153 ZNF703Q9H7S9 590 aaPredicted RBP4.9□□□□□ -1.63
PROM1-211ENST00000511153 TRIM45Q9H8W5 580 aaPredicted RBP4.9□□□□□ -1.63
PROM1-211ENST00000511153 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.9□□□□□ -1.63
PROM1-211ENST00000511153 OLAHQ9NV23 265 aa4.9□□□□□ -1.63
PROM1-211ENST00000511153 MED17Q9NVC6 651 aa4.9□□□□□ -1.63
PROM1-211ENST00000511153 CALML5Q9NZT1 146 aa4.9□□□□□ -1.63
PROM1-211ENST00000511153 SPRR3Q9UBC9 169 aa4.9□□□□□ -1.63
PROM1-211ENST00000511153 AURKCQ9UQB9 309 aa4.9□□□□□ -1.63
PROM1-211ENST00000511153 CAMK2AQ9UQM7 478 aa4.9□□□□□ -1.63
PROM1-211ENST00000511153 RP1L1Q8IWN7 2480 aaPredicted RBP4.9□□□□□ -1.63
PROM1-211ENST00000511153 DSPPQ9NZW4 1301 aa4.89□□□□□ -1.63
PROM1-211ENST00000511153 TRGV5A0A0B4J1U4 118 aa4.89□□□□□ -1.63
PROM1-211ENST00000511153 FAM47E-STBD1D6RA91 191 aa4.89□□□□□ -1.63
PROM1-211ENST00000511153 ACOT7O00154 380 aa4.89□□□□□ -1.63
PROM1-211ENST00000511153 ZIC3O60481 467 aa4.89□□□□□ -1.63
PROM1-211ENST00000511153 GMNNO75496 209 aa4.89□□□□□ -1.63
PROM1-211ENST00000511153 SERPINB7O75635 380 aa4.89□□□□□ -1.63
PROM1-211ENST00000511153 GLSO94925 669 aaPredicted RBP4.89□□□□□ -1.63
PROM1-211ENST00000511153 SNX4O95219 450 aa4.89□□□□□ -1.63
PROM1-211ENST00000511153 FESP07332 822 aa4.89□□□□□ -1.63
PROM1-211ENST00000511153 LINGO3P0C6S8 592 aa4.89□□□□□ -1.63
PROM1-211ENST00000511153 TFPIP10646 304 aa4.89□□□□□ -1.63
PROM1-211ENST00000511153 GP1BBP13224 206 aa4.89□□□□□ -1.63
PROM1-211ENST00000511153 ENDOUP21128 410 aaKnown RBP4.89□□□□□ -1.63
PROM1-211ENST00000511153 GNLYP22749 145 aa4.89□□□□□ -1.63
PROM1-211ENST00000511153 HTR1EP28566 365 aa4.89□□□□□ -1.63
PROM1-211ENST00000511153 P2RX1P51575 399 aa4.89□□□□□ -1.63
PROM1-211ENST00000511153 RGS8P57771 180 aaPredicted RBP4.89□□□□□ -1.63
PROM1-211ENST00000511153 SESN3P58005 492 aa4.89□□□□□ -1.63
PROM1-211ENST00000511153 TLE1Q04724 770 aa4.89□□□□□ -1.63
PROM1-211ENST00000511153 RBBP4Q09028 425 aa4.89□□□□□ -1.63
PROM1-211ENST00000511153 C17orf67Q0P5P2 114 aa4.89□□□□□ -1.63
PROM1-211ENST00000511153 SNTA1Q13424 505 aa4.89□□□□□ -1.63
PROM1-211ENST00000511153 GNA13Q14344 377 aa4.89□□□□□ -1.63
PROM1-211ENST00000511153 SLC10A1Q14973 349 aa4.89□□□□□ -1.63
PROM1-211ENST00000511153 KPNB1Q14974 876 aaKnown RBP4.89□□□□□ -1.63
PROM1-211ENST00000511153 PLPPR5Q32ZL2 321 aa4.89□□□□□ -1.63
PROM1-211ENST00000511153 INTS11Q5TA45 600 aaKnown RBP4.89□□□□□ -1.63
PROM1-211ENST00000511153 C1orf146Q5VVC0 180 aa4.89□□□□□ -1.63
PROM1-211ENST00000511153 C1QL3Q5VWW1 255 aa4.89□□□□□ -1.63
PROM1-211ENST00000511153 ZNF585AQ6P3V2 769 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms