RNA–Protein interactions for RNA: ENST00000509333.5

PDLIM5-212, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-212ENST00000509333 CNEP1R1Q8N9A8 125 aa14.45□□□□□ -0.1
PDLIM5-212ENST00000509333 ATP6V1C2Q8NEY4 427 aa14.45□□□□□ -0.1
PDLIM5-212ENST00000509333 LINC01560Q8TB33 94 aa14.45□□□□□ -0.1
PDLIM5-212ENST00000509333 RBM24Q9BX46 236 aaKnown RBP14.45□□□□□ -0.1
PDLIM5-212ENST00000509333 PRRG4Q9BZD6 226 aa14.45□□□□□ -0.1
PDLIM5-212ENST00000509333 ZNF385DQ9H6B1 395 aa14.45□□□□□ -0.1
PDLIM5-212ENST00000509333 EXOSC3Q9NQT5 275 aaKnown RBP14.45□□□□□ -0.1
PDLIM5-212ENST00000509333 PLSCR4Q9NRQ2 329 aa14.45□□□□□ -0.1
PDLIM5-212ENST00000509333 THUMPD1Q9NXG2 353 aaKnown RBP14.45□□□□□ -0.1
PDLIM5-212ENST00000509333 PACSIN3Q9UKS6 424 aa14.45□□□□□ -0.1
PDLIM5-212ENST00000509333 CSMD1Q96PZ7 3565 aa14.44□□□□□ -0.1
PDLIM5-212ENST00000509333 TRBV5-3A0A0A0MS03 114 aa14.44□□□□□ -0.1
PDLIM5-212ENST00000509333 DBIP07108 87 aaKnown RBP14.44□□□□□ -0.1
PDLIM5-212ENST00000509333 NUDT7P0C024 238 aa14.44□□□□□ -0.1
PDLIM5-212ENST00000509333 NCF2P19878 526 aaPredicted RBP14.44□□□□□ -0.1
PDLIM5-212ENST00000509333 RYKP34925 604 aa14.44□□□□□ -0.1
PDLIM5-212ENST00000509333 CCR4P51679 360 aa14.44□□□□□ -0.1
PDLIM5-212ENST00000509333 DSTNP60981 165 aa14.44□□□□□ -0.1
PDLIM5-212ENST00000509333 FAM27E3Q08E93 113 aa14.44□□□□□ -0.1
PDLIM5-212ENST00000509333 MYBPHQ13203 477 aa14.44□□□□□ -0.1
PDLIM5-212ENST00000509333 DLEU7Q6UYE1 221 aa14.44□□□□□ -0.1
PDLIM5-212ENST00000509333 FAM214BQ7L5A3 538 aa14.44□□□□□ -0.1
PDLIM5-212ENST00000509333 ADGRG3Q86Y34 549 aa14.44□□□□□ -0.1
PDLIM5-212ENST00000509333 CMIPQ8IY22 773 aa14.44□□□□□ -0.1
PDLIM5-212ENST00000509333 ZZZ3Q8IYH5 903 aa14.44□□□□□ -0.1
PDLIM5-212ENST00000509333 TMCO5AQ8N6Q1 288 aa14.44□□□□□ -0.1
PDLIM5-212ENST00000509333 ZNF610Q8N9Z0 462 aa14.44□□□□□ -0.1
PDLIM5-212ENST00000509333 FAM222BQ8WU58 562 aa14.44□□□□□ -0.1
PDLIM5-212ENST00000509333 TMEM234Q8WY98 164 aa14.44□□□□□ -0.1
PDLIM5-212ENST00000509333 ROBO4Q8WZ75 1007 aa14.44□□□□□ -0.1
PDLIM5-212ENST00000509333 RABEP2Q9H5N1 569 aa14.44□□□□□ -0.1
PDLIM5-212ENST00000509333 BCL2L10Q9HD36 194 aa14.44□□□□□ -0.1
PDLIM5-212ENST00000509333 NPHS2Q9NP85 383 aa14.44□□□□□ -0.1
PDLIM5-212ENST00000509333 MCTS1Q9ULC4 181 aaKnown RBP14.44□□□□□ -0.1
PDLIM5-212ENST00000509333 AKAP6Q13023 2319 aa14.43□□□□□ -0.1
PDLIM5-212ENST00000509333 A0A0G2JPF8 293 aa14.43□□□□□ -0.1
PDLIM5-212ENST00000509333 TUBAL3A6NHL2 446 aa14.43□□□□□ -0.1
PDLIM5-212ENST00000509333 GJE1A6NN92 205 aa14.43□□□□□ -0.1
PDLIM5-212ENST00000509333 HNRNPCL2B2RXH8 293 aa14.43□□□□□ -0.1
PDLIM5-212ENST00000509333 HNRNPCL3B7ZW38 293 aa14.43□□□□□ -0.1
PDLIM5-212ENST00000509333 NR5A2O00482 541 aa14.43□□□□□ -0.1
PDLIM5-212ENST00000509333 HNRNPCL1O60812 293 aaKnown RBP14.43□□□□□ -0.1
PDLIM5-212ENST00000509333 CTAG2O75638 210 aa14.43□□□□□ -0.1
PDLIM5-212ENST00000509333 SYNGR4O95473 234 aa14.43□□□□□ -0.1
PDLIM5-212ENST00000509333 HNRNPCL4P0DMR1 293 aa14.43□□□□□ -0.1
PDLIM5-212ENST00000509333 CD8BP10966 210 aa14.43□□□□□ -0.1
PDLIM5-212ENST00000509333 EPXP11678 715 aa14.43□□□□□ -0.1
PDLIM5-212ENST00000509333 IL7RP16871 459 aa14.43□□□□□ -0.1
PDLIM5-212ENST00000509333 APOBEC1P41238 236 aaKnown RBP14.43□□□□□ -0.1
PDLIM5-212ENST00000509333 HPCAP84074 193 aa14.43□□□□□ -0.1
PDLIM5-212ENST00000509333 SORDQ00796 357 aa14.43□□□□□ -0.1
PDLIM5-212ENST00000509333 GTF2IRD2BQ6EKJ0 949 aa14.43□□□□□ -0.1
PDLIM5-212ENST00000509333 PLEKHM3Q6ZWE6 761 aa14.43□□□□□ -0.1
PDLIM5-212ENST00000509333 GTF2IRD2Q86UP8 949 aa14.43□□□□□ -0.1
PDLIM5-212ENST00000509333 PEX5LQ8IYB4 626 aa14.43□□□□□ -0.1
PDLIM5-212ENST00000509333 ARFGAP2Q8N6H7 521 aa14.43□□□□□ -0.1
PDLIM5-212ENST00000509333 OR52P1PQ8NH57 321 aa14.43□□□□□ -0.1
PDLIM5-212ENST00000509333 SIKE1Q9BRV8 207 aa14.43□□□□□ -0.1
PDLIM5-212ENST00000509333 CCDC106Q9BWC9 280 aa14.43□□□□□ -0.1
PDLIM5-212ENST00000509333 SRXN1Q9BYN0 137 aa14.43□□□□□ -0.1
PDLIM5-212ENST00000509333 OPN3Q9H1Y3 402 aaPredicted RBP14.43□□□□□ -0.1
PDLIM5-212ENST00000509333 COQ10BQ9H8M1 238 aa14.43□□□□□ -0.1
PDLIM5-212ENST00000509333 TIGARQ9NQ88 270 aa14.43□□□□□ -0.1
PDLIM5-212ENST00000509333 GLRX2Q9NS18 164 aa14.43□□□□□ -0.1
PDLIM5-212ENST00000509333 RLIMQ9NVW2 624 aa14.43□□□□□ -0.1
PDLIM5-212ENST00000509333 DNAJB12Q9NXW2 375 aaKnown RBP14.43□□□□□ -0.1
PDLIM5-212ENST00000509333 GALNT8Q9NY28 637 aa14.43□□□□□ -0.1
PDLIM5-212ENST00000509333 CALML5Q9NZT1 146 aa14.43□□□□□ -0.1
PDLIM5-212ENST00000509333 VAPAQ9P0L0 249 aa14.43□□□□□ -0.1
PDLIM5-212ENST00000509333 P2RX2Q9UBL9 471 aa14.43□□□□□ -0.1
PDLIM5-212ENST00000509333 CHST2Q9Y4C5 530 aa14.43□□□□□ -0.1
PDLIM5-212ENST00000509333 DSPPQ9NZW4 1301 aa14.42□□□□□ -0.1
PDLIM5-212ENST00000509333 A0A0G2JND7 137 aa14.42□□□□□ -0.1
PDLIM5-212ENST00000509333 A0A1W2PNR3 127 aa14.42□□□□□ -0.1
PDLIM5-212ENST00000509333 SMNDC1O75940 238 aaKnown RBP eCLIP14.42□□□□□ -0.1
PDLIM5-212ENST00000509333 FCGR2AP12318 317 aa14.42□□□□□ -0.1
PDLIM5-212ENST00000509333 GPX2P18283 190 aa14.42□□□□□ -0.1
PDLIM5-212ENST00000509333 ENPP1P22413 925 aa14.42□□□□□ -0.1
PDLIM5-212ENST00000509333 IDH2P48735 452 aaKnown RBP14.42□□□□□ -0.1
PDLIM5-212ENST00000509333 CRISP3P54108 245 aa14.42□□□□□ -0.1
PDLIM5-212ENST00000509333 RAC3P60763 192 aa14.42□□□□□ -0.1
PDLIM5-212ENST00000509333 SIRPAP78324 504 aa14.42□□□□□ -0.1
PDLIM5-212ENST00000509333 MERTKQ12866 999 aa14.42□□□□□ -0.1
PDLIM5-212ENST00000509333 FADDQ13158 208 aa14.42□□□□□ -0.1
PDLIM5-212ENST00000509333 SELENBP1Q13228 472 aa14.42□□□□□ -0.1
PDLIM5-212ENST00000509333 VRK2Q86Y07 508 aa14.42□□□□□ -0.1
PDLIM5-212ENST00000509333 C10orf111Q8N326 155 aa14.42□□□□□ -0.1
PDLIM5-212ENST00000509333 CLIP4Q8N3C7 705 aa14.42□□□□□ -0.1
PDLIM5-212ENST00000509333 TMEM19Q96HH6 336 aa14.42□□□□□ -0.1
PDLIM5-212ENST00000509333 GMPPAQ96IJ6 420 aaPredicted RBP14.42□□□□□ -0.1
PDLIM5-212ENST00000509333 RSPO3Q9BXY4 272 aaPredicted RBP14.42□□□□□ -0.1
PDLIM5-212ENST00000509333 RAD21L1Q9H4I0 556 aa14.42□□□□□ -0.1
PDLIM5-212ENST00000509333 SERINC1Q9NRX5 453 aa14.42□□□□□ -0.1
PDLIM5-212ENST00000509333 PRDM4Q9UKN5 801 aa14.42□□□□□ -0.1
PDLIM5-212ENST00000509333 CLEC4AQ9UMR7 237 aa14.42□□□□□ -0.1
PDLIM5-212ENST00000509333 ZNF232Q9UNY5 417 aa14.42□□□□□ -0.1
PDLIM5-212ENST00000509333 CCDC168Q8NDH2 2452 aa14.41□□□□□ -0.1
PDLIM5-212ENST00000509333 CDHR4A6H8M9 788 aa14.41□□□□□ -0.1
PDLIM5-212ENST00000509333 FAAHO00519 579 aa14.41□□□□□ -0.1
PDLIM5-212ENST00000509333 AP3D1O14617 1153 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms