RNA–Protein interactions for RNA: ENST00000508848.5

POLR2J3-213, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 1,030 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-213ENST00000508848 WDR60Q8WVS4 1066 aa9.54□□□□□ -0.88
POLR2J3-213ENST00000508848 SDCCAG3Q96C92 435 aa9.54□□□□□ -0.88
POLR2J3-213ENST00000508848 LRRC58Q96CX6 371 aa9.54□□□□□ -0.88
POLR2J3-213ENST00000508848 CMTM5Q96DZ9 223 aa9.54□□□□□ -0.88
POLR2J3-213ENST00000508848 TMEM19Q96HH6 336 aa9.54□□□□□ -0.88
POLR2J3-213ENST00000508848 ZNF607Q96SK3 696 aa9.54□□□□□ -0.88
POLR2J3-213ENST00000508848 HOPXQ9BPY8 73 aaPredicted RBP9.54□□□□□ -0.88
POLR2J3-213ENST00000508848 THUMPD3Q9BV44 507 aaKnown RBP9.54□□□□□ -0.88
POLR2J3-213ENST00000508848 CCDC106Q9BWC9 280 aa9.54□□□□□ -0.88
POLR2J3-213ENST00000508848 SFXN3Q9BWM7 321 aa9.54□□□□□ -0.88
POLR2J3-213ENST00000508848 ADAM19Q9H013 955 aa9.54□□□□□ -0.88
POLR2J3-213ENST00000508848 MYLK2Q9H1R3 596 aa9.54□□□□□ -0.88
POLR2J3-213ENST00000508848 NANOGQ9H9S0 305 aa9.54□□□□□ -0.88
POLR2J3-213ENST00000508848 RNF122Q9H9V4 155 aa9.54□□□□□ -0.88
POLR2J3-213ENST00000508848 CACYBPQ9HB71 228 aaKnown RBP9.54□□□□□ -0.88
POLR2J3-213ENST00000508848 KCNJ16Q9NPI9 418 aa9.54□□□□□ -0.88
POLR2J3-213ENST00000508848 SERINC1Q9NRX5 453 aa9.54□□□□□ -0.88
POLR2J3-213ENST00000508848 ALKBH4Q9NXW9 302 aa9.54□□□□□ -0.88
POLR2J3-213ENST00000508848 SH3BGRL2Q9UJC5 107 aa9.54□□□□□ -0.88
POLR2J3-213ENST00000508848 VDAC3Q9Y277 283 aa9.54□□□□□ -0.88
POLR2J3-213ENST00000508848 TRAPPC4Q9Y296 219 aa9.54□□□□□ -0.88
POLR2J3-213ENST00000508848 RPH3AQ9Y2J0 694 aaPredicted RBP9.54□□□□□ -0.88
POLR2J3-213ENST00000508848 NAV2Q8IVL1 2488 aa9.54□□□□□ -0.88
POLR2J3-213ENST00000508848 NPIPA5A0A0B4J1W7 369 aa9.53□□□□□ -0.88
POLR2J3-213ENST00000508848 CENPVL1A0A0U1RR11 272 aa9.53□□□□□ -0.88
POLR2J3-213ENST00000508848 CFAP73A6NFT4 308 aa9.53□□□□□ -0.88
POLR2J3-213ENST00000508848 CLCA1A8K7I4 914 aa9.53□□□□□ -0.88
POLR2J3-213ENST00000508848 NPIPA7E9PJI5 369 aa9.53□□□□□ -0.88
POLR2J3-213ENST00000508848 H0Y3Z8 333 aa9.53□□□□□ -0.88
POLR2J3-213ENST00000508848 ZNF208O43345 1280 aa9.53□□□□□ -0.88
POLR2J3-213ENST00000508848 OIP5O43482 229 aa9.53□□□□□ -0.88
POLR2J3-213ENST00000508848 NUDT14O95848 222 aa9.53□□□□□ -0.88
POLR2J3-213ENST00000508848 BCHEP06276 602 aa9.53□□□□□ -0.88
POLR2J3-213ENST00000508848 UBTFL6P0CB48 400 aaPredicted RBP9.53□□□□□ -0.88
POLR2J3-213ENST00000508848 NPIPA8P0DM63 369 aa9.53□□□□□ -0.88
POLR2J3-213ENST00000508848 IGFBP2P18065 325 aa9.53□□□□□ -0.88
POLR2J3-213ENST00000508848 HTR1EP28566 365 aa9.53□□□□□ -0.88
POLR2J3-213ENST00000508848 ACAA2P42765 397 aaKnown RBP9.53□□□□□ -0.88
POLR2J3-213ENST00000508848 STARP49675 285 aa9.53□□□□□ -0.88
POLR2J3-213ENST00000508848 GZMMP51124 257 aa9.53□□□□□ -0.88
POLR2J3-213ENST00000508848 SUCLG1P53597 346 aaKnown RBP9.53□□□□□ -0.88
POLR2J3-213ENST00000508848 SEC24CP53992 1094 aa9.53□□□□□ -0.88
POLR2J3-213ENST00000508848 CLDN20P56880 219 aa9.53□□□□□ -0.88
POLR2J3-213ENST00000508848 RAC3P60763 192 aa9.53□□□□□ -0.88
POLR2J3-213ENST00000508848 PLAURQ03405 335 aa9.53□□□□□ -0.88
POLR2J3-213ENST00000508848 QPRTQ15274 297 aa9.53□□□□□ -0.88
POLR2J3-213ENST00000508848 GUSBP1Q15486 140 aa9.53□□□□□ -0.88
POLR2J3-213ENST00000508848 CTU2Q2VPK5 515 aaKnown RBP9.53□□□□□ -0.88
POLR2J3-213ENST00000508848 MMEL1Q495T6 779 aa9.53□□□□□ -0.88
POLR2J3-213ENST00000508848 MRPL2Q5T653 305 aaKnown RBP9.53□□□□□ -0.88
POLR2J3-213ENST00000508848 INTS11Q5TA45 600 aaKnown RBP9.53□□□□□ -0.88
POLR2J3-213ENST00000508848 FAM91A1Q658Y4 838 aa9.53□□□□□ -0.88
POLR2J3-213ENST00000508848 SP5Q6BEB4 398 aaPredicted RBP9.53□□□□□ -0.88
POLR2J3-213ENST00000508848 C3orf33Q6P1S2 294 aa9.53□□□□□ -0.88
POLR2J3-213ENST00000508848 DHRS4L2Q6PKH6 230 aa9.53□□□□□ -0.88
POLR2J3-213ENST00000508848 DNAJC14Q6Y2X3 702 aaPredicted RBP9.53□□□□□ -0.88
POLR2J3-213ENST00000508848 CCDC80Q76M96 950 aa9.53□□□□□ -0.88
POLR2J3-213ENST00000508848 ARPINQ7Z6K5 226 aa9.53□□□□□ -0.88
POLR2J3-213ENST00000508848 CALHM3Q86XJ0 350 aa9.53□□□□□ -0.88
POLR2J3-213ENST00000508848 SLC43A2Q8N370 569 aa9.53□□□□□ -0.88
POLR2J3-213ENST00000508848 RPRMLQ8N4K4 120 aa9.53□□□□□ -0.88
POLR2J3-213ENST00000508848 ZNF614Q8N883 585 aa9.53□□□□□ -0.88
POLR2J3-213ENST00000508848 LSMEM1Q8N8F7 131 aa9.53□□□□□ -0.88
POLR2J3-213ENST00000508848 OR10Q1Q8NGQ4 319 aa9.53□□□□□ -0.88
POLR2J3-213ENST00000508848 FBXO27Q8NI29 283 aa9.53□□□□□ -0.88
POLR2J3-213ENST00000508848 RASSF5Q8WWW0 418 aa9.53□□□□□ -0.88
POLR2J3-213ENST00000508848 CNOT9Q92600 299 aaKnown RBP9.53□□□□□ -0.88
POLR2J3-213ENST00000508848 CPNE4Q96A23 557 aaPredicted RBP9.53□□□□□ -0.88
POLR2J3-213ENST00000508848 LRRC46Q96FV0 321 aa9.53□□□□□ -0.88
POLR2J3-213ENST00000508848 SH3YL1Q96HL8 342 aaPredicted RBP9.53□□□□□ -0.88
POLR2J3-213ENST00000508848 KLHL15Q96M94 604 aa9.53□□□□□ -0.88
POLR2J3-213ENST00000508848 RNF145Q96MT1 663 aa9.53□□□□□ -0.88
POLR2J3-213ENST00000508848 ELAC2Q9BQ52 826 aaKnown RBP9.53□□□□□ -0.88
POLR2J3-213ENST00000508848 PIGMQ9H3S5 423 aa9.53□□□□□ -0.88
POLR2J3-213ENST00000508848 IKZF5Q9H5V7 419 aa9.53□□□□□ -0.88
POLR2J3-213ENST00000508848 EFCAB1Q9HAE3 211 aa9.53□□□□□ -0.88
POLR2J3-213ENST00000508848 C12orf10Q9HB07 376 aa9.53□□□□□ -0.88
POLR2J3-213ENST00000508848 DNAJB12Q9NXW2 375 aaKnown RBP9.53□□□□□ -0.88
POLR2J3-213ENST00000508848 TNFRSF10DQ9UBN6 386 aa9.53□□□□□ -0.88
POLR2J3-213ENST00000508848 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.53□□□□□ -0.88
POLR2J3-213ENST00000508848 HDGFL3Q9Y3E1 203 aa9.53□□□□□ -0.88
POLR2J3-213ENST00000508848 SPIN1Q9Y657 262 aaPredicted RBP9.53□□□□□ -0.88
POLR2J3-213ENST00000508848 SLC22A20A6NK97 555 aa9.52□□□□□ -0.89
POLR2J3-213ENST00000508848 C5orf58C9J3I9 102 aa9.52□□□□□ -0.89
POLR2J3-213ENST00000508848 FXYD1O00168 92 aa9.52□□□□□ -0.89
POLR2J3-213ENST00000508848 MFN2O95140 757 aa9.52□□□□□ -0.89
POLR2J3-213ENST00000508848 ZNF136P52737 540 aa9.52□□□□□ -0.89
POLR2J3-213ENST00000508848 CARD18P57730 90 aa9.52□□□□□ -0.89
POLR2J3-213ENST00000508848 EPS8Q12929 822 aa9.52□□□□□ -0.89
POLR2J3-213ENST00000508848 SCARB2Q14108 478 aa9.52□□□□□ -0.89
POLR2J3-213ENST00000508848 TOMM34Q15785 309 aaPredicted RBP9.52□□□□□ -0.89
POLR2J3-213ENST00000508848 ZNF311Q5JNZ3 666 aa9.52□□□□□ -0.89
POLR2J3-213ENST00000508848 ERICH5Q6P6B1 374 aa9.52□□□□□ -0.89
POLR2J3-213ENST00000508848 PLEKHM3Q6ZWE6 761 aa9.52□□□□□ -0.89
POLR2J3-213ENST00000508848 PATL1Q86TB9 770 aaKnown RBP9.52□□□□□ -0.89
POLR2J3-213ENST00000508848 MTDHQ86UE4 582 aaKnown RBP9.52□□□□□ -0.89
POLR2J3-213ENST00000508848 PTOV1Q86YD1 416 aa9.52□□□□□ -0.89
POLR2J3-213ENST00000508848 TNIP2Q8NFZ5 429 aa9.52□□□□□ -0.89
POLR2J3-213ENST00000508848 OR2V1Q8NHB1 315 aa9.52□□□□□ -0.89
POLR2J3-213ENST00000508848 OSTF1Q92882 214 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms