RNA–Protein interactions for RNA: ENST00000508659.5

CLDND1-219, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 681 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-219ENST00000508659 DNAJA2O60884 412 aa15.21■□□□□ 0.03
CLDND1-219ENST00000508659 TNFSF13O75888 250 aa15.21■□□□□ 0.03
CLDND1-219ENST00000508659 AQP8O94778 261 aa15.21■□□□□ 0.03
CLDND1-219ENST00000508659 NUDT7P0C024 238 aa15.21■□□□□ 0.03
CLDND1-219ENST00000508659 TFPTP0C1Z6 253 aa15.21■□□□□ 0.03
CLDND1-219ENST00000508659 SHC1P29353 583 aa15.21■□□□□ 0.03
CLDND1-219ENST00000508659 SSTR2P30874 369 aa15.21■□□□□ 0.03
CLDND1-219ENST00000508659 PLAURQ03405 335 aa15.21■□□□□ 0.03
CLDND1-219ENST00000508659 MERTKQ12866 999 aa15.21■□□□□ 0.03
CLDND1-219ENST00000508659 SF3A3Q12874 501 aaKnown RBP eCLIP15.21■□□□□ 0.03
CLDND1-219ENST00000508659 MYBPHQ13203 477 aa15.21■□□□□ 0.03
CLDND1-219ENST00000508659 MAPK11Q15759 364 aa15.21■□□□□ 0.03
CLDND1-219ENST00000508659 MRPL2Q5T653 305 aaKnown RBP15.21■□□□□ 0.03
CLDND1-219ENST00000508659 CGB2Q6NT52 195 aa15.21■□□□□ 0.03
CLDND1-219ENST00000508659 BBS10Q8TAM1 723 aa15.21■□□□□ 0.03
CLDND1-219ENST00000508659 CNOT9Q92600 299 aaKnown RBP15.21■□□□□ 0.03
CLDND1-219ENST00000508659 MAL2Q969L2 176 aa15.21■□□□□ 0.03
CLDND1-219ENST00000508659 CPNE4Q96A23 557 aaPredicted RBP15.21■□□□□ 0.03
CLDND1-219ENST00000508659 ACER3Q9NUN7 267 aa15.21■□□□□ 0.03
CLDND1-219ENST00000508659 SPIN1Q9Y657 262 aaPredicted RBP15.21■□□□□ 0.03
CLDND1-219ENST00000508659 TRBV5-3A0A0A0MS03 114 aa15.2■□□□□ 0.02
CLDND1-219ENST00000508659 A0A0G2JPF8 293 aa15.2■□□□□ 0.02
CLDND1-219ENST00000508659 EVPLLA8MZ36 301 aa15.2■□□□□ 0.02
CLDND1-219ENST00000508659 HNRNPCL2B2RXH8 293 aa15.2■□□□□ 0.02
CLDND1-219ENST00000508659 HNRNPCL3B7ZW38 293 aa15.2■□□□□ 0.02
CLDND1-219ENST00000508659 SYT5O00445 386 aa15.2■□□□□ 0.02
CLDND1-219ENST00000508659 HNRNPCL1O60812 293 aaKnown RBP15.2■□□□□ 0.02
CLDND1-219ENST00000508659 SMNDC1O75940 238 aaKnown RBP eCLIP15.2■□□□□ 0.02
CLDND1-219ENST00000508659 HNRNPCL4P0DMR1 293 aa15.2■□□□□ 0.02
CLDND1-219ENST00000508659 BMP2P12643 396 aa15.2■□□□□ 0.02
CLDND1-219ENST00000508659 CD1EP15812 388 aa15.2■□□□□ 0.02
CLDND1-219ENST00000508659 MDH1P40925 334 aaKnown RBP15.2■□□□□ 0.02
CLDND1-219ENST00000508659 CARD18P57730 90 aa15.2■□□□□ 0.02
CLDND1-219ENST00000508659 SESN3P58005 492 aa15.2■□□□□ 0.02
CLDND1-219ENST00000508659 LARS2Q15031 903 aaKnown RBP15.2■□□□□ 0.02
CLDND1-219ENST00000508659 ZNF239Q16600 458 aaKnown RBP15.2■□□□□ 0.02
CLDND1-219ENST00000508659 TMEM176BQ3YBM2 270 aaPredicted RBP15.2■□□□□ 0.02
CLDND1-219ENST00000508659 RNF220Q5VTB9 566 aa15.2■□□□□ 0.02
CLDND1-219ENST00000508659 PRAMEF8Q5VWM4 474 aa15.2■□□□□ 0.02
CLDND1-219ENST00000508659 PRAMEF7Q5VXH5 474 aa15.2■□□□□ 0.02
CLDND1-219ENST00000508659 ZNF836Q6ZNA1 936 aa15.2■□□□□ 0.02
CLDND1-219ENST00000508659 GRINAQ7Z429 371 aa15.2■□□□□ 0.02
CLDND1-219ENST00000508659 VRK2Q86Y07 508 aa15.2■□□□□ 0.02
CLDND1-219ENST00000508659 OR52P1PQ8NH57 321 aa15.2■□□□□ 0.02
CLDND1-219ENST00000508659 TSPEARQ8WU66 669 aa15.2■□□□□ 0.02
CLDND1-219ENST00000508659 SLC25A43Q8WUT9 341 aaPredicted RBP15.2■□□□□ 0.02
CLDND1-219ENST00000508659 ZNF524Q96C55 264 aa15.2■□□□□ 0.02
CLDND1-219ENST00000508659 C14orf79Q96F83 325 aa15.2■□□□□ 0.02
CLDND1-219ENST00000508659 REXO5Q96IC2 774 aaKnown RBP15.2■□□□□ 0.02
CLDND1-219ENST00000508659 RBM24Q9BX46 236 aaKnown RBP15.2■□□□□ 0.02
CLDND1-219ENST00000508659 ARMC7Q9H6L4 198 aa15.2■□□□□ 0.02
CLDND1-219ENST00000508659 JKAMPQ9P055 326 aa15.2■□□□□ 0.02
CLDND1-219ENST00000508659 KCNN3Q9UGI6 736 aa15.2■□□□□ 0.02
CLDND1-219ENST00000508659 ZNF443Q9Y2A4 671 aaPredicted RBP15.2■□□□□ 0.02
CLDND1-219ENST00000508659 EMC9Q9Y3B6 208 aa15.2■□□□□ 0.02
CLDND1-219ENST00000508659 CFAP73A6NFT4 308 aa15.19■□□□□ 0.02
CLDND1-219ENST00000508659 THBS1P07996 1170 aa15.19■□□□□ 0.02
CLDND1-219ENST00000508659 DLX5P56178 289 aa15.19■□□□□ 0.02
CLDND1-219ENST00000508659 SORDQ00796 357 aa15.19■□□□□ 0.02
CLDND1-219ENST00000508659 NFYCQ13952 458 aa15.19■□□□□ 0.02
CLDND1-219ENST00000508659 VWA1Q6PCB0 445 aa15.19■□□□□ 0.02
CLDND1-219ENST00000508659 PLEKHM3Q6ZWE6 761 aa15.19■□□□□ 0.02
CLDND1-219ENST00000508659 KIF18BQ86Y91 864 aa15.19■□□□□ 0.02
CLDND1-219ENST00000508659 ZNF440Q8IYI8 595 aa15.19■□□□□ 0.02
CLDND1-219ENST00000508659 DPP10Q8N608 796 aa15.19■□□□□ 0.02
CLDND1-219ENST00000508659 OSTF1Q92882 214 aa15.19■□□□□ 0.02
CLDND1-219ENST00000508659 GMPPAQ96IJ6 420 aaPredicted RBP15.19■□□□□ 0.02
CLDND1-219ENST00000508659 ZNF559Q9BR84 538 aa15.19■□□□□ 0.02
CLDND1-219ENST00000508659 CPPED1Q9BRF8 314 aaPredicted RBP15.19■□□□□ 0.02
CLDND1-219ENST00000508659 COQ10BQ9H8M1 238 aa15.19■□□□□ 0.02
CLDND1-219ENST00000508659 GALNT8Q9NY28 637 aa15.19■□□□□ 0.02
CLDND1-219ENST00000508659 KLHL14Q9P2G3 628 aa15.19■□□□□ 0.02
CLDND1-219ENST00000508659 GMEB1Q9Y692 573 aa15.19■□□□□ 0.02
CLDND1-219ENST00000508659 CDHR4A6H8M9 788 aa15.18■□□□□ 0.02
CLDND1-219ENST00000508659 AP3D1O14617 1153 aa15.18■□□□□ 0.02
CLDND1-219ENST00000508659 MSTNO14793 375 aa15.18■□□□□ 0.02
CLDND1-219ENST00000508659 EFNA2O43921 213 aa15.18■□□□□ 0.02
CLDND1-219ENST00000508659 ADAM11O75078 769 aa15.18■□□□□ 0.02
CLDND1-219ENST00000508659 PABPC4LP0CB38 370 aaKnown RBP15.18■□□□□ 0.02
CLDND1-219ENST00000508659 ARAFP10398 606 aa15.18■□□□□ 0.02
CLDND1-219ENST00000508659 APOBEC1P41238 236 aaKnown RBP15.18■□□□□ 0.02
CLDND1-219ENST00000508659 KIR2DL3P43628 341 aa15.18■□□□□ 0.02
CLDND1-219ENST00000508659 HTR3AP46098 478 aa15.18■□□□□ 0.02
CLDND1-219ENST00000508659 IDH2P48735 452 aaKnown RBP15.18■□□□□ 0.02
CLDND1-219ENST00000508659 CTBP2P56545 445 aa15.18■□□□□ 0.02
CLDND1-219ENST00000508659 TLE4Q04727 773 aa15.18■□□□□ 0.02
CLDND1-219ENST00000508659 SNTB1Q13884 538 aaKnown RBP15.18■□□□□ 0.02
CLDND1-219ENST00000508659 MAPRE2Q15555 327 aa15.18■□□□□ 0.02
CLDND1-219ENST00000508659 ZSWIM7Q19AV6 140 aa15.18■□□□□ 0.02
CLDND1-219ENST00000508659 SYT14P1Q58G82 188 aa15.18■□□□□ 0.02
CLDND1-219ENST00000508659 DLEU7Q6UYE1 221 aa15.18■□□□□ 0.02
CLDND1-219ENST00000508659 FAM214BQ7L5A3 538 aa15.18■□□□□ 0.02
CLDND1-219ENST00000508659 ZNF295-AS1Q8N0V1 137 aa15.18■□□□□ 0.02
CLDND1-219ENST00000508659 NFKBIDQ8NI38 313 aa15.18■□□□□ 0.02
CLDND1-219ENST00000508659 RNF128Q8TEB7 428 aa15.18■□□□□ 0.02
CLDND1-219ENST00000508659 STARD4Q96DR4 205 aa15.18■□□□□ 0.02
CLDND1-219ENST00000508659 OR5B2Q96R09 309 aa15.18■□□□□ 0.02
CLDND1-219ENST00000508659 CCDC106Q9BWC9 280 aa15.18■□□□□ 0.02
CLDND1-219ENST00000508659 SRXN1Q9BYN0 137 aa15.18■□□□□ 0.02
CLDND1-219ENST00000508659 IKZF5Q9H5V7 419 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms