RNA–Protein interactions for RNA: ENST00000508474.5

UBE2D3-224, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 4,819 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-224ENST00000508474 PTNP21246 168 aa6.87□□□□□ -1.31
UBE2D3-224ENST00000508474 PAX6P26367 422 aa6.87□□□□□ -1.31
UBE2D3-224ENST00000508474 SHC1P29353 583 aa6.87□□□□□ -1.31
UBE2D3-224ENST00000508474 CCR7P32248 378 aa6.87□□□□□ -1.31
UBE2D3-224ENST00000508474 EVX1P49640 407 aa6.87□□□□□ -1.31
UBE2D3-224ENST00000508474 ZNF41P51814 821 aaPredicted RBP6.87□□□□□ -1.31
UBE2D3-224ENST00000508474 TAS2R46P59540 309 aa6.87□□□□□ -1.31
UBE2D3-224ENST00000508474 TRA2BP62995 288 aaKnown RBP6.87□□□□□ -1.31
UBE2D3-224ENST00000508474 YIF1BQ5BJH7 314 aa6.87□□□□□ -1.31
UBE2D3-224ENST00000508474 CATSPEREQ5SY80 951 aa6.87□□□□□ -1.31
UBE2D3-224ENST00000508474 PDSS1Q5T2R2 415 aa6.87□□□□□ -1.31
UBE2D3-224ENST00000508474 ACOT7LQ6ZUV0 252 aa6.87□□□□□ -1.31
UBE2D3-224ENST00000508474 MFSD4AQ8N468 514 aa6.87□□□□□ -1.31
UBE2D3-224ENST00000508474 OR4K17Q8NGC6 315 aa6.87□□□□□ -1.31
UBE2D3-224ENST00000508474 OR4D10Q8NGI6 311 aa6.87□□□□□ -1.31
UBE2D3-224ENST00000508474 BMFQ96LC9 184 aa6.87□□□□□ -1.31
UBE2D3-224ENST00000508474 FAM83CQ9BQN1 747 aa6.87□□□□□ -1.31
UBE2D3-224ENST00000508474 BTBD2Q9BX70 525 aa6.87□□□□□ -1.31
UBE2D3-224ENST00000508474 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.87□□□□□ -1.31
UBE2D3-224ENST00000508474 MCOLN1Q9GZU1 580 aa6.87□□□□□ -1.31
UBE2D3-224ENST00000508474 HHATLQ9HCP6 504 aa6.87□□□□□ -1.31
UBE2D3-224ENST00000508474 PDLIM7Q9NR12 457 aa6.87□□□□□ -1.31
UBE2D3-224ENST00000508474 C1orf123Q9NWV4 160 aa6.87□□□□□ -1.31
UBE2D3-224ENST00000508474 PLEKHM1Q9Y4G2 1056 aa6.87□□□□□ -1.31
UBE2D3-224ENST00000508474 TMEM72A0PK05 275 aa6.86□□□□□ -1.31
UBE2D3-224ENST00000508474 GFRA2O00451 464 aa6.86□□□□□ -1.31
UBE2D3-224ENST00000508474 BET1O15155 118 aa6.86□□□□□ -1.31
UBE2D3-224ENST00000508474 ACSM4P0C7M7 580 aa6.86□□□□□ -1.31
UBE2D3-224ENST00000508474 UBL4AP11441 157 aa6.86□□□□□ -1.31
UBE2D3-224ENST00000508474 GPX2P18283 190 aa6.86□□□□□ -1.31
UBE2D3-224ENST00000508474 NME2P22392 152 aa6.86□□□□□ -1.31
UBE2D3-224ENST00000508474 ADRA1AP35348 466 aa6.86□□□□□ -1.31
UBE2D3-224ENST00000508474 CLRN1P58418 232 aa6.86□□□□□ -1.31
UBE2D3-224ENST00000508474 P2RY14Q15391 338 aa6.86□□□□□ -1.31
UBE2D3-224ENST00000508474 RPE65Q16518 533 aa6.86□□□□□ -1.31
UBE2D3-224ENST00000508474 TMEM244Q5VVB8 128 aa6.86□□□□□ -1.31
UBE2D3-224ENST00000508474 RBMS3Q6XE24 437 aaKnown RBP6.86□□□□□ -1.31
UBE2D3-224ENST00000508474 NPAS4Q8IUM7 802 aa6.86□□□□□ -1.31
UBE2D3-224ENST00000508474 MFSD6LQ8IWD5 586 aa6.86□□□□□ -1.31
UBE2D3-224ENST00000508474 SULF2Q8IWU5 870 aa6.86□□□□□ -1.31
UBE2D3-224ENST00000508474 CMIPQ8IY22 773 aa6.86□□□□□ -1.31
UBE2D3-224ENST00000508474 ZNF619Q8N2I2 560 aa6.86□□□□□ -1.31
UBE2D3-224ENST00000508474 SLC43A2Q8N370 569 aa6.86□□□□□ -1.31
UBE2D3-224ENST00000508474 OR6T1Q8NGN1 323 aa6.86□□□□□ -1.31
UBE2D3-224ENST00000508474 OR10R2Q8NGX6 335 aa6.86□□□□□ -1.31
UBE2D3-224ENST00000508474 LHFPL5Q8TAF8 219 aa6.86□□□□□ -1.31
UBE2D3-224ENST00000508474 NINJ1Q92982 152 aa6.86□□□□□ -1.31
UBE2D3-224ENST00000508474 IGSF8Q969P0 613 aa6.86□□□□□ -1.31
UBE2D3-224ENST00000508474 MS4A4EQ96PG1 132 aa6.86□□□□□ -1.31
UBE2D3-224ENST00000508474 OCSTAMPQ9BR26 566 aa6.86□□□□□ -1.31
UBE2D3-224ENST00000508474 SEC22CQ9BRL7 303 aa6.86□□□□□ -1.31
UBE2D3-224ENST00000508474 OR11A1Q9GZK7 315 aa6.86□□□□□ -1.31
UBE2D3-224ENST00000508474 SLC6A14Q9UN76 642 aa6.86□□□□□ -1.31
UBE2D3-224ENST00000508474 FBXO7Q9Y3I1 522 aa6.86□□□□□ -1.31
UBE2D3-224ENST00000508474 TRBV4-1A0A0J9YWV2 114 aa6.86□□□□□ -1.31
UBE2D3-224ENST00000508474 OR2T7P0C7T2 308 aa6.86□□□□□ -1.31
UBE2D3-224ENST00000508474 PTAFRP25105 342 aa6.86□□□□□ -1.31
UBE2D3-224ENST00000508474 ZNF140P52738 457 aaPredicted RBP6.86□□□□□ -1.31
UBE2D3-224ENST00000508474 RAP1AP62834 184 aa6.86□□□□□ -1.31
UBE2D3-224ENST00000508474 GPR17Q13304 367 aa6.86□□□□□ -1.31
UBE2D3-224ENST00000508474 RSU1Q15404 277 aa6.86□□□□□ -1.31
UBE2D3-224ENST00000508474 STEAP1BQ6NZ63 245 aa6.86□□□□□ -1.31
UBE2D3-224ENST00000508474 UNQ6126/PRO20091Q6UXV3 157 aa6.86□□□□□ -1.31
UBE2D3-224ENST00000508474 SH2D5Q6ZV89 423 aa6.86□□□□□ -1.31
UBE2D3-224ENST00000508474 OVCH1Q7RTY7 1134 aa6.86□□□□□ -1.31
UBE2D3-224ENST00000508474 FRMD1Q8N878 549 aa6.86□□□□□ -1.31
UBE2D3-224ENST00000508474 OR2T27Q8NH04 317 aa6.86□□□□□ -1.31
UBE2D3-224ENST00000508474 LINC01599Q8WXQ3 324 aa6.86□□□□□ -1.31
UBE2D3-224ENST00000508474 SLAMF9Q96A28 289 aa6.86□□□□□ -1.31
UBE2D3-224ENST00000508474 LRIG1Q96JA1 1093 aa6.86□□□□□ -1.31
UBE2D3-224ENST00000508474 TMEM121BQ9BXQ6 578 aaPredicted RBP6.86□□□□□ -1.31
UBE2D3-224ENST00000508474 RNF39Q9H2S5 420 aa6.86□□□□□ -1.31
UBE2D3-224ENST00000508474 ANKRD19PQ9H560 264 aa6.86□□□□□ -1.31
UBE2D3-224ENST00000508474 ACSS1Q9NUB1 689 aaPredicted RBP6.86□□□□□ -1.31
UBE2D3-224ENST00000508474 TMEM100Q9NV29 134 aa6.86□□□□□ -1.31
UBE2D3-224ENST00000508474 CPNE7Q9UBL6 633 aa6.86□□□□□ -1.31
UBE2D3-224ENST00000508474 KCPQ6ZWJ8 1503 aa6.86□□□□□ -1.31
UBE2D3-224ENST00000508474 UBR1Q8IWV7 1749 aa6.86□□□□□ -1.31
UBE2D3-224ENST00000508474 HMX2A2RU54 273 aa6.86□□□□□ -1.31
UBE2D3-224ENST00000508474 ZNF587BE7ETH6 402 aa6.86□□□□□ -1.31
UBE2D3-224ENST00000508474 BHLHE40O14503 412 aa6.86□□□□□ -1.31
UBE2D3-224ENST00000508474 VEGFDO43915 354 aa6.86□□□□□ -1.31
UBE2D3-224ENST00000508474 CYTIPO60759 359 aa6.86□□□□□ -1.31
UBE2D3-224ENST00000508474 ASGR2P07307 311 aa6.86□□□□□ -1.31
UBE2D3-224ENST00000508474 RHOP08100 348 aa6.86□□□□□ -1.31
UBE2D3-224ENST00000508474 CPN1P15169 458 aa6.86□□□□□ -1.31
UBE2D3-224ENST00000508474 TAGLN2P37802 199 aaKnown RBP6.86□□□□□ -1.31
UBE2D3-224ENST00000508474 CLDN6P56747 220 aa6.86□□□□□ -1.31
UBE2D3-224ENST00000508474 MFGE8Q08431 387 aaPredicted RBP6.86□□□□□ -1.31
UBE2D3-224ENST00000508474 IGSF11Q5DX21 431 aa6.86□□□□□ -1.31
UBE2D3-224ENST00000508474 MLIPQ5VWP3 458 aa6.86□□□□□ -1.31
UBE2D3-224ENST00000508474 HEPHL1Q6MZM0 1159 aa6.86□□□□□ -1.31
UBE2D3-224ENST00000508474 PSRC1Q6PGN9 363 aaPredicted RBP6.86□□□□□ -1.31
UBE2D3-224ENST00000508474 DLEU7Q6UYE1 221 aa6.86□□□□□ -1.31
UBE2D3-224ENST00000508474 MAMDC2Q7Z304 686 aaPredicted RBP6.86□□□□□ -1.31
UBE2D3-224ENST00000508474 ASPGQ86U10 573 aa6.86□□□□□ -1.31
UBE2D3-224ENST00000508474 KDM8Q8N371 416 aa6.86□□□□□ -1.31
UBE2D3-224ENST00000508474 NECTIN4Q96NY8 510 aa6.86□□□□□ -1.31
UBE2D3-224ENST00000508474 WDFY2Q96P53 400 aa6.86□□□□□ -1.31
UBE2D3-224ENST00000508474 SORCS2Q96PQ0 1159 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms