RNA–Protein interactions for RNA: ENST00000506941.1

NPHP4-210, Transcript of nephrocystin 4, humanhuman

TSL 4

Gene NPHP4, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-210ENST00000506941 CCT8L1PA6NM43 557 aa16.36■□□□□ 0.21
NPHP4-210ENST00000506941 TPST1O60507 370 aa16.36■□□□□ 0.21
NPHP4-210ENST00000506941 DCTN3O75935 186 aa16.36■□□□□ 0.21
NPHP4-210ENST00000506941 PRG2P13727 222 aa16.36■□□□□ 0.21
NPHP4-210ENST00000506941 ADH6P28332 368 aa16.36■□□□□ 0.21
NPHP4-210ENST00000506941 PCGF2P35227 344 aa16.36■□□□□ 0.21
NPHP4-210ENST00000506941 ACAA2P42765 397 aaKnown RBP16.36■□□□□ 0.21
NPHP4-210ENST00000506941 SLC6A8P48029 635 aa16.36■□□□□ 0.21
NPHP4-210ENST00000506941 NUDT2P50583 147 aa16.36■□□□□ 0.21
NPHP4-210ENST00000506941 DLX5P56178 289 aa16.36■□□□□ 0.21
NPHP4-210ENST00000506941 RAC1P63000 192 aa16.36■□□□□ 0.21
NPHP4-210ENST00000506941 EPS8Q12929 822 aa16.36■□□□□ 0.21
NPHP4-210ENST00000506941 CTU2Q2VPK5 515 aaKnown RBP16.36■□□□□ 0.21
NPHP4-210ENST00000506941 GLIPR1L2Q4G1C9 344 aa16.36■□□□□ 0.21
NPHP4-210ENST00000506941 LACC1Q8IV20 430 aa16.36■□□□□ 0.21
NPHP4-210ENST00000506941 CCDC71Q8IV32 467 aaPredicted RBP16.36■□□□□ 0.21
NPHP4-210ENST00000506941 ZNF808Q8N4W9 903 aaPredicted RBP16.36■□□□□ 0.21
NPHP4-210ENST00000506941 MEIOBQ8N635 442 aa16.36■□□□□ 0.21
NPHP4-210ENST00000506941 NAXEQ8NCW5 288 aa16.36■□□□□ 0.21
NPHP4-210ENST00000506941 TNIP2Q8NFZ5 429 aa16.36■□□□□ 0.21
NPHP4-210ENST00000506941 RND1Q92730 232 aa16.36■□□□□ 0.21
NPHP4-210ENST00000506941 CMTM5Q96DZ9 223 aa16.36■□□□□ 0.21
NPHP4-210ENST00000506941 ADGRG7Q96K78 797 aa16.36■□□□□ 0.21
NPHP4-210ENST00000506941 ZNF583Q96ND8 569 aa16.36■□□□□ 0.21
NPHP4-210ENST00000506941 LRRC37BQ96QE4 947 aa16.36■□□□□ 0.21
NPHP4-210ENST00000506941 ECSITQ9BQ95 431 aa16.36■□□□□ 0.21
NPHP4-210ENST00000506941 CALHM2Q9HA72 323 aa16.36■□□□□ 0.21
NPHP4-210ENST00000506941 EFCAB1Q9HAE3 211 aa16.36■□□□□ 0.21
NPHP4-210ENST00000506941 ACER3Q9NUN7 267 aa16.36■□□□□ 0.21
NPHP4-210ENST00000506941 CMTM6Q9NX76 183 aa16.36■□□□□ 0.21
NPHP4-210ENST00000506941 GMPR2Q9P2T1 348 aaKnown RBP16.36■□□□□ 0.21
NPHP4-210ENST00000506941 Q9UFV3 132 aa16.36■□□□□ 0.21
NPHP4-210ENST00000506941 ZNF232Q9UNY5 417 aa16.36■□□□□ 0.21
NPHP4-210ENST00000506941 RNF6Q9Y252 685 aa16.36■□□□□ 0.21
NPHP4-210ENST00000506941 A0A0J9YW62 118 aa16.35■□□□□ 0.21
NPHP4-210ENST00000506941 A1L4Q6 167 aa16.35■□□□□ 0.21
NPHP4-210ENST00000506941 MBD3L4A6NDZ8 208 aaPredicted RBP16.35■□□□□ 0.21
NPHP4-210ENST00000506941 MBD3L3A6NE82 208 aaPredicted RBP16.35■□□□□ 0.21
NPHP4-210ENST00000506941 CFAP73A6NFT4 308 aa16.35■□□□□ 0.21
NPHP4-210ENST00000506941 MBD3L5A6NJ08 208 aaPredicted RBP16.35■□□□□ 0.21
NPHP4-210ENST00000506941 FRS3O43559 492 aa16.35■□□□□ 0.21
NPHP4-210ENST00000506941 PRKAR1BP31321 381 aa16.35■□□□□ 0.21
NPHP4-210ENST00000506941 CPA2P48052 419 aa16.35■□□□□ 0.21
NPHP4-210ENST00000506941 IDH2P48735 452 aaKnown RBP16.35■□□□□ 0.21
NPHP4-210ENST00000506941 SMSP52788 366 aa16.35■□□□□ 0.21
NPHP4-210ENST00000506941 DMTNQ08495 405 aa16.35■□□□□ 0.21
NPHP4-210ENST00000506941 VMACQ2NL98 169 aa16.35■□□□□ 0.21
NPHP4-210ENST00000506941 GKAP1Q5VSY0 366 aaPredicted RBP16.35■□□□□ 0.21
NPHP4-210ENST00000506941 FAM91A1Q658Y4 838 aa16.35■□□□□ 0.21
NPHP4-210ENST00000506941 HACD2Q6Y1H2 254 aa16.35■□□□□ 0.21
NPHP4-210ENST00000506941 PLEKHM3Q6ZWE6 761 aa16.35■□□□□ 0.21
NPHP4-210ENST00000506941 KRT73Q86Y46 540 aa16.35■□□□□ 0.21
NPHP4-210ENST00000506941 LILRA2Q8N149 483 aa16.35■□□□□ 0.21
NPHP4-210ENST00000506941 C9orf106Q8NAJ2 232 aa16.35■□□□□ 0.21
NPHP4-210ENST00000506941 OR10Q1Q8NGQ4 319 aa16.35■□□□□ 0.21
NPHP4-210ENST00000506941 MBD3L2Q8NHZ7 208 aaPredicted RBP16.35■□□□□ 0.21
NPHP4-210ENST00000506941 ZNF563Q8TA94 476 aa16.35■□□□□ 0.21
NPHP4-210ENST00000506941 SDCCAG3Q96C92 435 aa16.35■□□□□ 0.21
NPHP4-210ENST00000506941 ZNF845Q96IR2 970 aaPredicted RBP16.35■□□□□ 0.21
NPHP4-210ENST00000506941 UCN2Q96RP3 112 aa16.35■□□□□ 0.21
NPHP4-210ENST00000506941 CACYBPQ9HB71 228 aaKnown RBP16.35■□□□□ 0.21
NPHP4-210ENST00000506941 ARL8BQ9NVJ2 186 aa16.35■□□□□ 0.21
NPHP4-210ENST00000506941 FAAHO00519 579 aa16.34■□□□□ 0.21
NPHP4-210ENST00000506941 NME4O00746 187 aa16.34■□□□□ 0.21
NPHP4-210ENST00000506941 EIF1AYO14602 144 aaKnown RBP16.34■□□□□ 0.21
NPHP4-210ENST00000506941 MFN2O95140 757 aa16.34■□□□□ 0.21
NPHP4-210ENST00000506941 TGM6O95932 706 aa16.34■□□□□ 0.21
NPHP4-210ENST00000506941 GP1BBP13224 206 aa16.34■□□□□ 0.21
NPHP4-210ENST00000506941 AGAP20933 346 aa16.34■□□□□ 0.21
NPHP4-210ENST00000506941 ME2P23368 584 aa16.34■□□□□ 0.21
NPHP4-210ENST00000506941 CEACAM8P31997 349 aaPredicted RBP16.34■□□□□ 0.21
NPHP4-210ENST00000506941 SFTPDP35247 375 aa16.34■□□□□ 0.21
NPHP4-210ENST00000506941 TIMP3P35625 211 aa16.34■□□□□ 0.21
NPHP4-210ENST00000506941 CRYBA2P53672 197 aa16.34■□□□□ 0.21
NPHP4-210ENST00000506941 MERTKQ12866 999 aa16.34■□□□□ 0.21
NPHP4-210ENST00000506941 SF3B4Q15427 424 aaKnown RBP eCLIP16.34■□□□□ 0.21
NPHP4-210ENST00000506941 RIPPLY2Q5TAB7 128 aa16.34■□□□□ 0.21
NPHP4-210ENST00000506941 POMZP3Q6PJE2 187 aa16.34■□□□□ 0.21
NPHP4-210ENST00000506941 DHRS4L2Q6PKH6 230 aa16.34■□□□□ 0.21
NPHP4-210ENST00000506941 XKRXQ6PP77 449 aa16.34■□□□□ 0.21
NPHP4-210ENST00000506941 SLC15A3Q8IY34 581 aa16.34■□□□□ 0.21
NPHP4-210ENST00000506941 ZNF440Q8IYI8 595 aa16.34■□□□□ 0.21
NPHP4-210ENST00000506941 TMEM234Q8WY98 164 aa16.34■□□□□ 0.21
NPHP4-210ENST00000506941 REXO5Q96IC2 774 aaKnown RBP16.34■□□□□ 0.21
NPHP4-210ENST00000506941 ZNF607Q96SK3 696 aa16.34■□□□□ 0.21
NPHP4-210ENST00000506941 SPATA5L1Q9BVQ7 753 aa16.34■□□□□ 0.21
NPHP4-210ENST00000506941 CTPS2Q9NRF8 586 aa16.34■□□□□ 0.21
NPHP4-210ENST00000506941 SETXQ7Z333 2677 aaKnown RBP16.34■□□□□ 0.21
NPHP4-210ENST00000506941 NBPF19A0A087WUL8 3843 aa16.33■□□□□ 0.21
NPHP4-210ENST00000506941 FAM220BPB1ANY3 271 aa16.33■□□□□ 0.2
NPHP4-210ENST00000506941 TNFSF11O14788 317 aa16.33■□□□□ 0.2
NPHP4-210ENST00000506941 ADAMDEC1O15204 470 aa16.33■□□□□ 0.2
NPHP4-210ENST00000506941 OPN1SWP03999 348 aa16.33■□□□□ 0.2
NPHP4-210ENST00000506941 SLC7A2P52569 658 aa16.33■□□□□ 0.2
NPHP4-210ENST00000506941 HOXC5Q00444 222 aa16.33■□□□□ 0.2
NPHP4-210ENST00000506941 SELENBP1Q13228 472 aa16.33■□□□□ 0.2
NPHP4-210ENST00000506941 ART3Q13508 389 aa16.33■□□□□ 0.2
NPHP4-210ENST00000506941 ZSWIM7Q19AV6 140 aa16.33■□□□□ 0.2
NPHP4-210ENST00000506941 ARMC8Q8IUR7 673 aa16.33■□□□□ 0.2
NPHP4-210ENST00000506941 SLC30A8Q8IWU4 369 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms