RNA–Protein interactions for RNA: ENST00000506560.5

LIN54-206, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 2,757 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-206ENST00000506560 PRODH2Q9UF12 536 aa11.19□□□□□ -0.62
LIN54-206ENST00000506560 PCDHGA3Q9Y5H0 932 aa11.19□□□□□ -0.62
LIN54-206ENST00000506560 C4orf47A7E2U8 309 aa11.19□□□□□ -0.62
LIN54-206ENST00000506560 KDM4EB2RXH2 506 aaPredicted RBP11.19□□□□□ -0.62
LIN54-206ENST00000506560 UTS2O95399 124 aa11.19□□□□□ -0.62
LIN54-206ENST00000506560 PPP1R3DO95685 299 aa11.19□□□□□ -0.62
LIN54-206ENST00000506560 LALBAP00709 142 aa11.19□□□□□ -0.62
LIN54-206ENST00000506560 MTNR1AP48039 350 aa11.19□□□□□ -0.62
LIN54-206ENST00000506560 LIMK1P53667 647 aa11.19□□□□□ -0.62
LIN54-206ENST00000506560 NCF4Q15080 339 aa11.19□□□□□ -0.62
LIN54-206ENST00000506560 SPHARQ15513 63 aa11.19□□□□□ -0.62
LIN54-206ENST00000506560 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.19□□□□□ -0.62
LIN54-206ENST00000506560 TRIM61Q5EBN2 209 aa11.19□□□□□ -0.62
LIN54-206ENST00000506560 SLC25A30Q5SVS4 291 aa11.19□□□□□ -0.62
LIN54-206ENST00000506560 ZNF362Q5T0B9 420 aaPredicted RBP11.19□□□□□ -0.62
LIN54-206ENST00000506560 FNDC7Q5VTL7 733 aa11.19□□□□□ -0.62
LIN54-206ENST00000506560 LIPKQ5VXJ0 399 aa11.19□□□□□ -0.62
LIN54-206ENST00000506560 PMEPA1Q969W9 287 aa11.19□□□□□ -0.62
LIN54-206ENST00000506560 DUSP23Q9BVJ7 150 aa11.19□□□□□ -0.62
LIN54-206ENST00000506560 ERGIC3Q9Y282 383 aa11.19□□□□□ -0.62
LIN54-206ENST00000506560 C2orf92A0A1B0GVN3 265 aa11.18□□□□□ -0.62
LIN54-206ENST00000506560 BOLA2-SMG1P6H3BVE0 249 aa11.18□□□□□ -0.62
LIN54-206ENST00000506560 REM1O75628 298 aa11.18□□□□□ -0.62
LIN54-206ENST00000506560 GYPBP06028 91 aa11.18□□□□□ -0.62
LIN54-206ENST00000506560 LIMS3P0CW19 117 aa11.18□□□□□ -0.62
LIN54-206ENST00000506560 LIMS4P0CW20 117 aa11.18□□□□□ -0.62
LIN54-206ENST00000506560 PPICP45877 212 aa11.18□□□□□ -0.62
LIN54-206ENST00000506560 PSMD7P51665 324 aa11.18□□□□□ -0.62
LIN54-206ENST00000506560 ELAVL1Q15717 326 aaKnown RBP11.18□□□□□ -0.62
LIN54-206ENST00000506560 MEDAGQ5VYS4 303 aa11.18□□□□□ -0.62
LIN54-206ENST00000506560 TMPRSS11FQ6ZWK6 438 aa11.18□□□□□ -0.62
LIN54-206ENST00000506560 ZNF554Q86TJ5 538 aa11.18□□□□□ -0.62
LIN54-206ENST00000506560 CROCCP3Q8IVE0 287 aa11.18□□□□□ -0.62
LIN54-206ENST00000506560 SIRT6Q8N6T7 355 aa11.18□□□□□ -0.62
LIN54-206ENST00000506560 LSMEM1Q8N8F7 131 aa11.18□□□□□ -0.62
LIN54-206ENST00000506560 BRIX1Q8TDN6 353 aaKnown RBP11.18□□□□□ -0.62
LIN54-206ENST00000506560 GATAD2BQ8WXI9 593 aa11.18□□□□□ -0.62
LIN54-206ENST00000506560 ITFG2Q969R8 447 aa11.18□□□□□ -0.62
LIN54-206ENST00000506560 TMEM203Q969S6 136 aa11.18□□□□□ -0.62
LIN54-206ENST00000506560 C3orf49Q96BT1 292 aa11.18□□□□□ -0.62
LIN54-206ENST00000506560 CRELD1Q96HD1 420 aa11.18□□□□□ -0.62
LIN54-206ENST00000506560 PLEKHA8Q96JA3 519 aa11.18□□□□□ -0.62
LIN54-206ENST00000506560 LCORQ96JN0 433 aaPredicted RBP11.18□□□□□ -0.62
LIN54-206ENST00000506560 ZNF578Q96N58 590 aaPredicted RBP11.18□□□□□ -0.62
LIN54-206ENST00000506560 IFT27Q9BW83 186 aa11.18□□□□□ -0.62
LIN54-206ENST00000506560 POLR2J2Q9GZM3 115 aaKnown RBP11.18□□□□□ -0.62
LIN54-206ENST00000506560 MCCC2Q9HCC0 563 aa11.18□□□□□ -0.62
LIN54-206ENST00000506560 FAIMQ9NVQ4 179 aa11.18□□□□□ -0.62
LIN54-206ENST00000506560 DIMT1Q9UNQ2 313 aaKnown RBP11.18□□□□□ -0.62
LIN54-206ENST00000506560 PTP4A3O75365 173 aa11.18□□□□□ -0.62
LIN54-206ENST00000506560 RORAP35398 523 aa11.18□□□□□ -0.62
LIN54-206ENST00000506560 TGM4P49221 684 aa11.18□□□□□ -0.62
LIN54-206ENST00000506560 TOMM34Q15785 309 aaPredicted RBP11.18□□□□□ -0.62
LIN54-206ENST00000506560 RHBDD2Q6NTF9 364 aa11.18□□□□□ -0.62
LIN54-206ENST00000506560 LINC00114Q6XXX2 140 aa11.18□□□□□ -0.62
LIN54-206ENST00000506560 BMP8AQ7Z5Y6 402 aa11.18□□□□□ -0.62
LIN54-206ENST00000506560 CARFQ8N187 725 aa11.18□□□□□ -0.62
LIN54-206ENST00000506560 TMCO5AQ8N6Q1 288 aa11.18□□□□□ -0.62
LIN54-206ENST00000506560 OR7G1Q8NGA0 311 aa11.18□□□□□ -0.62
LIN54-206ENST00000506560 C9orf43Q8TAL5 461 aaPredicted RBP11.18□□□□□ -0.62
LIN54-206ENST00000506560 IFI44Q8TCB0 444 aa11.18□□□□□ -0.62
LIN54-206ENST00000506560 SLC46A1Q96NT5 459 aa11.18□□□□□ -0.62
LIN54-206ENST00000506560 ENAMQ9NRM1 1142 aa11.18□□□□□ -0.62
LIN54-206ENST00000506560 IGKV1D-42A0A075B6H8 117 aa11.17□□□□□ -0.62
LIN54-206ENST00000506560 KHNYNO15037 678 aaKnown RBP11.17□□□□□ -0.62
LIN54-206ENST00000506560 POLR1CO15160 346 aaPredicted RBP11.17□□□□□ -0.62
LIN54-206ENST00000506560 SCRG1O75711 98 aa11.17□□□□□ -0.62
LIN54-206ENST00000506560 RAB36O95755 333 aa11.17□□□□□ -0.62
LIN54-206ENST00000506560 IL33O95760 270 aa11.17□□□□□ -0.62
LIN54-206ENST00000506560 GALNSP34059 522 aa11.17□□□□□ -0.62
LIN54-206ENST00000506560 FOXK2Q01167 660 aa11.17□□□□□ -0.62
LIN54-206ENST00000506560 SKP2Q13309 424 aa11.17□□□□□ -0.62
LIN54-206ENST00000506560 ZNF791Q3KP31 576 aaPredicted RBP11.17□□□□□ -0.62
LIN54-206ENST00000506560 PHF19Q5T6S3 580 aa11.17□□□□□ -0.62
LIN54-206ENST00000506560 OAFQ86UD1 273 aa11.17□□□□□ -0.62
LIN54-206ENST00000506560 KMT5CQ86Y97 462 aa11.17□□□□□ -0.62
LIN54-206ENST00000506560 RNF113BQ8IZP6 322 aaKnown RBP11.17□□□□□ -0.62
LIN54-206ENST00000506560 CYP4Z2PQ8N1L4 340 aa11.17□□□□□ -0.62
LIN54-206ENST00000506560 TOR1AIP2Q8NFQ8 470 aa11.17□□□□□ -0.62
LIN54-206ENST00000506560 OR5M3Q8NGP4 307 aa11.17□□□□□ -0.62
LIN54-206ENST00000506560 PMM1Q92871 262 aa11.17□□□□□ -0.62
LIN54-206ENST00000506560 PTP4A1Q93096 173 aa11.17□□□□□ -0.62
LIN54-206ENST00000506560 C8orf44Q96CB5 159 aa11.17□□□□□ -0.62
LIN54-206ENST00000506560 TBX5Q99593 518 aa11.17□□□□□ -0.62
LIN54-206ENST00000506560 TRIM2Q9C040 744 aa11.17□□□□□ -0.62
LIN54-206ENST00000506560 SUSD2Q9UGT4 822 aa11.17□□□□□ -0.62
LIN54-206ENST00000506560 OSGIN1Q9UJX0 560 aa11.17□□□□□ -0.62
LIN54-206ENST00000506560 ADAM18Q9Y3Q7 739 aa11.17□□□□□ -0.62
LIN54-206ENST00000506560 CCRL2O00421 344 aa11.17□□□□□ -0.62
LIN54-206ENST00000506560 MYL12BO14950 172 aa11.17□□□□□ -0.62
LIN54-206ENST00000506560 MSL3P1P0C860 447 aa11.17□□□□□ -0.62
LIN54-206ENST00000506560 MOGQ16653 247 aa11.17□□□□□ -0.62
LIN54-206ENST00000506560 NKAIN1Q4KMZ8 207 aa11.17□□□□□ -0.62
LIN54-206ENST00000506560 SDK2Q58EX2 2172 aa11.17□□□□□ -0.62
LIN54-206ENST00000506560 POMZP3Q6PJE2 187 aa11.17□□□□□ -0.62
LIN54-206ENST00000506560 C19orf48Q6RUI8 117 aa11.17□□□□□ -0.62
LIN54-206ENST00000506560 CXXC5Q7LFL8 322 aaKnown RBP11.17□□□□□ -0.62
LIN54-206ENST00000506560 MARCH3Q86UD3 253 aa11.17□□□□□ -0.62
LIN54-206ENST00000506560 OR51G2Q8NGK0 314 aa11.17□□□□□ -0.62
LIN54-206ENST00000506560 PELOQ9BRX2 385 aaKnown RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms