RNA–Protein interactions for RNA: ENST00000506060.5

POLR2J3-211, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 3

Gene POLR2J3, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-211ENST00000506060 FER1L6-AS2Q96M78 137 aa11□□□□□ -0.65
POLR2J3-211ENST00000506060 Q96MT0 163 aa11□□□□□ -0.65
POLR2J3-211ENST00000506060 PRSS27Q9BQR3 290 aa11□□□□□ -0.65
POLR2J3-211ENST00000506060 MESP1Q9BRJ9 268 aa11□□□□□ -0.65
POLR2J3-211ENST00000506060 TMEM43Q9BTV4 400 aa11□□□□□ -0.65
POLR2J3-211ENST00000506060 CDCP1Q9H5V8 836 aa11□□□□□ -0.65
POLR2J3-211ENST00000506060 VCX3AQ9NNX9 186 aa11□□□□□ -0.65
POLR2J3-211ENST00000506060 CLN6Q9NWW5 311 aa11□□□□□ -0.65
POLR2J3-211ENST00000506060 TUBA8Q9NY65 449 aaPredicted RBP11□□□□□ -0.65
POLR2J3-211ENST00000506060 PPP4R1LQ9P1A2 415 aa11□□□□□ -0.65
POLR2J3-211ENST00000506060 ABI3Q9P2A4 366 aa11□□□□□ -0.65
POLR2J3-211ENST00000506060 REV1Q9UBZ9 1251 aa11□□□□□ -0.65
POLR2J3-211ENST00000506060 ZFHX2Q9C0A1 2572 aaPredicted RBP11□□□□□ -0.65
POLR2J3-211ENST00000506060 HEATR5AQ86XA9 2040 aa10.99□□□□□ -0.65
POLR2J3-211ENST00000506060 LOC101059948A0A1B0GTJ6 334 aa10.99□□□□□ -0.65
POLR2J3-211ENST00000506060 EFCAB9A8MZ26 197 aa10.99□□□□□ -0.65
POLR2J3-211ENST00000506060 E9PQ18 207 aa10.99□□□□□ -0.65
POLR2J3-211ENST00000506060 CDK2AP1O14519 115 aa10.99□□□□□ -0.65
POLR2J3-211ENST00000506060 TERTO14746 1132 aaKnown RBP10.99□□□□□ -0.65
POLR2J3-211ENST00000506060 HCN1O60741 890 aa10.99□□□□□ -0.65
POLR2J3-211ENST00000506060 DXOO77932 396 aaKnown RBP10.99□□□□□ -0.65
POLR2J3-211ENST00000506060 LYPD3O95274 346 aa10.99□□□□□ -0.65
POLR2J3-211ENST00000506060 THY1P04216 161 aa10.99□□□□□ -0.65
POLR2J3-211ENST00000506060 SAGP10523 405 aaPredicted RBP10.99□□□□□ -0.65
POLR2J3-211ENST00000506060 LIPCP11150 499 aa10.99□□□□□ -0.65
POLR2J3-211ENST00000506060 BMP7P18075 431 aa10.99□□□□□ -0.65
POLR2J3-211ENST00000506060 EEF1B2P24534 225 aaKnown RBP10.99□□□□□ -0.65
POLR2J3-211ENST00000506060 CXCR1P25024 350 aa10.99□□□□□ -0.65
POLR2J3-211ENST00000506060 GABARAPL2P60520 117 aa10.99□□□□□ -0.65
POLR2J3-211ENST00000506060 TUBA4AP68366 448 aa10.99□□□□□ -0.65
POLR2J3-211ENST00000506060 PLAURQ03405 335 aa10.99□□□□□ -0.65
POLR2J3-211ENST00000506060 CD47Q08722 323 aa10.99□□□□□ -0.65
POLR2J3-211ENST00000506060 CDK5R2Q13319 367 aa10.99□□□□□ -0.65
POLR2J3-211ENST00000506060 MAD2L1BPQ15013 274 aaPredicted RBP10.99□□□□□ -0.65
POLR2J3-211ENST00000506060 MEP1AQ16819 746 aa10.99□□□□□ -0.65
POLR2J3-211ENST00000506060 ZNF791Q3KP31 576 aaPredicted RBP10.99□□□□□ -0.65
POLR2J3-211ENST00000506060 BROXQ5VW32 411 aa10.99□□□□□ -0.65
POLR2J3-211ENST00000506060 SLX4IPQ5VYV7 408 aa10.99□□□□□ -0.65
POLR2J3-211ENST00000506060 SLC30A6Q6NXT4 461 aa10.99□□□□□ -0.65
POLR2J3-211ENST00000506060 SLC27A4Q6P1M0 643 aa10.99□□□□□ -0.65
POLR2J3-211ENST00000506060 C5orf46Q6UWT4 87 aa10.99□□□□□ -0.65
POLR2J3-211ENST00000506060 LINC00114Q6XXX2 140 aa10.99□□□□□ -0.65
POLR2J3-211ENST00000506060 CYP4Z2PQ8N1L4 340 aa10.99□□□□□ -0.65
POLR2J3-211ENST00000506060 DUSP19Q8WTR2 217 aa10.99□□□□□ -0.65
POLR2J3-211ENST00000506060 FBLIM1Q8WUP2 373 aa10.99□□□□□ -0.65
POLR2J3-211ENST00000506060 ST8SIA1Q92185 356 aa10.99□□□□□ -0.65
POLR2J3-211ENST00000506060 ZNF566Q969W8 418 aa10.99□□□□□ -0.65
POLR2J3-211ENST00000506060 C3orf49Q96BT1 292 aa10.99□□□□□ -0.65
POLR2J3-211ENST00000506060 SGTBQ96EQ0 304 aa10.99□□□□□ -0.65
POLR2J3-211ENST00000506060 SGCZQ96LD1 299 aa10.99□□□□□ -0.65
POLR2J3-211ENST00000506060 SLC38A2Q96QD8 506 aa10.99□□□□□ -0.65
POLR2J3-211ENST00000506060 NODALQ96S42 347 aa10.99□□□□□ -0.65
POLR2J3-211ENST00000506060 ZNF426Q9BUY5 554 aa10.99□□□□□ -0.65
POLR2J3-211ENST00000506060 SLC25A19Q9HC21 320 aa10.99□□□□□ -0.65
POLR2J3-211ENST00000506060 CPNE5Q9HCH3 593 aa10.99□□□□□ -0.65
POLR2J3-211ENST00000506060 CCNB1IP1Q9NPC3 277 aa10.99□□□□□ -0.65
POLR2J3-211ENST00000506060 ATP13A2Q9NQ11 1180 aa10.99□□□□□ -0.65
POLR2J3-211ENST00000506060 TBC1D23Q9NUY8 699 aa10.99□□□□□ -0.65
POLR2J3-211ENST00000506060 HPF1Q9NWY4 346 aa10.99□□□□□ -0.65
POLR2J3-211ENST00000506060 TAS2R10Q9NYW0 307 aa10.99□□□□□ -0.65
POLR2J3-211ENST00000506060 CNIH4Q9P003 139 aa10.99□□□□□ -0.65
POLR2J3-211ENST00000506060 CDH10Q9Y6N8 788 aa10.99□□□□□ -0.65
POLR2J3-211ENST00000506060 SH3D21A4FU49 640 aa10.98□□□□□ -0.65
POLR2J3-211ENST00000506060 ANKUB1A6NFN9 424 aa10.98□□□□□ -0.65
POLR2J3-211ENST00000506060 SNTNA6NMZ2 147 aa10.98□□□□□ -0.65
POLR2J3-211ENST00000506060 M0R3G1 203 aa10.98□□□□□ -0.65
POLR2J3-211ENST00000506060 KLF4O43474 513 aa10.98□□□□□ -0.65
POLR2J3-211ENST00000506060 MRPS14O60783 128 aaKnown RBP10.98□□□□□ -0.65
POLR2J3-211ENST00000506060 SLC25A12O75746 678 aa10.98□□□□□ -0.65
POLR2J3-211ENST00000506060 SOX14O95416 240 aa10.98□□□□□ -0.65
POLR2J3-211ENST00000506060 CLPTM1O96005 669 aa10.98□□□□□ -0.65
POLR2J3-211ENST00000506060 HMGN1P05114 100 aa10.98□□□□□ -0.65
POLR2J3-211ENST00000506060 FUT4P22083 530 aa10.98□□□□□ -0.65
POLR2J3-211ENST00000506060 CASRP41180 1078 aa10.98□□□□□ -0.65
POLR2J3-211ENST00000506060 SOX3P41225 446 aa10.98□□□□□ -0.65
POLR2J3-211ENST00000506060 GPR4P46093 362 aa10.98□□□□□ -0.65
POLR2J3-211ENST00000506060 SLC9A3P48764 834 aa10.98□□□□□ -0.65
POLR2J3-211ENST00000506060 ZNF41P51814 821 aaPredicted RBP10.98□□□□□ -0.65
POLR2J3-211ENST00000506060 POLR2HP52434 150 aaKnown RBP10.98□□□□□ -0.65
POLR2J3-211ENST00000506060 RRADP55042 308 aa10.98□□□□□ -0.65
POLR2J3-211ENST00000506060 NHLH1Q02575 133 aa10.98□□□□□ -0.65
POLR2J3-211ENST00000506060 AIMP2Q13155 320 aaKnown RBP10.98□□□□□ -0.65
POLR2J3-211ENST00000506060 TMEM44Q2T9K0 475 aa10.98□□□□□ -0.65
POLR2J3-211ENST00000506060 COL28A1Q2UY09 1125 aa10.98□□□□□ -0.65
POLR2J3-211ENST00000506060 ANKDD1AQ495B1 522 aa10.98□□□□□ -0.65
POLR2J3-211ENST00000506060 H3F3CQ6NXT2 135 aa10.98□□□□□ -0.65
POLR2J3-211ENST00000506060 CBLN3Q6UW01 205 aa10.98□□□□□ -0.65
POLR2J3-211ENST00000506060 LYPD8Q6UX82 237 aa10.98□□□□□ -0.65
POLR2J3-211ENST00000506060 C16orf47Q6ZP98 133 aaPredicted RBP10.98□□□□□ -0.65
POLR2J3-211ENST00000506060 PTCHD4Q6ZW05 846 aa10.98□□□□□ -0.65
POLR2J3-211ENST00000506060 GRINAQ7Z429 371 aa10.98□□□□□ -0.65
POLR2J3-211ENST00000506060 OR8J1Q8NGP2 316 aa10.98□□□□□ -0.65
POLR2J3-211ENST00000506060 RNF138Q8WVD3 245 aa10.98□□□□□ -0.65
POLR2J3-211ENST00000506060 PLEKHA8Q96JA3 519 aa10.98□□□□□ -0.65
POLR2J3-211ENST00000506060 PTGES2Q9H7Z7 377 aa10.98□□□□□ -0.65
POLR2J3-211ENST00000506060 ICAM5Q9UMF0 924 aa10.98□□□□□ -0.65
POLR2J3-211ENST00000506060 BAIAP2Q9UQB8 552 aa10.98□□□□□ -0.65
POLR2J3-211ENST00000506060 WIF1Q9Y5W5 379 aa10.98□□□□□ -0.65
POLR2J3-211ENST00000506060 PTPRZ1P23471 2315 aaPredicted RBP10.98□□□□□ -0.65
POLR2J3-211ENST00000506060 GVINP1Q7Z2Y8 2422 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms