RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 CH25HO95992 272 aa15.88■□□□□ 0.13
TRAPPC11-204ENST00000505676 PRR23D2P0DMB1 279 aaPredicted RBP15.88■□□□□ 0.13
TRAPPC11-204ENST00000505676 UBL4AP11441 157 aa15.88■□□□□ 0.13
TRAPPC11-204ENST00000505676 GABRA5P31644 462 aa15.88■□□□□ 0.13
TRAPPC11-204ENST00000505676 HOXD12P35452 270 aa15.88■□□□□ 0.13
TRAPPC11-204ENST00000505676 ATP6V1E1P36543 226 aa15.88■□□□□ 0.13
TRAPPC11-204ENST00000505676 CRYBB2P43320 205 aa15.88■□□□□ 0.13
TRAPPC11-204ENST00000505676 FXYD6P3P58550 94 aa15.88■□□□□ 0.13
TRAPPC11-204ENST00000505676 DMWDQ09019 674 aa15.88■□□□□ 0.13
TRAPPC11-204ENST00000505676 HLA-DQA1Q5Y7H0 255 aa15.88■□□□□ 0.13
TRAPPC11-204ENST00000505676 CPOQ8IVL8 374 aa15.88■□□□□ 0.13
TRAPPC11-204ENST00000505676 ZSCAN1Q8NBB4 408 aa15.88■□□□□ 0.13
TRAPPC11-204ENST00000505676 ZNF721Q8TF20 911 aa15.88■□□□□ 0.13
TRAPPC11-204ENST00000505676 HSPBAP1Q96EW2 488 aa15.88■□□□□ 0.13
TRAPPC11-204ENST00000505676 TMEM43Q9BTV4 400 aa15.88■□□□□ 0.13
TRAPPC11-204ENST00000505676 MED18Q9BUE0 208 aa15.88■□□□□ 0.13
TRAPPC11-204ENST00000505676 CDADC1Q9BWV3 514 aa15.88■□□□□ 0.13
TRAPPC11-204ENST00000505676 HAO2Q9NYQ3 351 aa15.88■□□□□ 0.13
TRAPPC11-204ENST00000505676 CORINQ9Y5Q5 1042 aa15.88■□□□□ 0.13
TRAPPC11-204ENST00000505676 A0A1W2PQD3 144 aa15.88■□□□□ 0.13
TRAPPC11-204ENST00000505676 IDH3BO43837 385 aa15.88■□□□□ 0.13
TRAPPC11-204ENST00000505676 NDUFB2O95178 105 aa15.88■□□□□ 0.13
TRAPPC11-204ENST00000505676 NTN1O95631 604 aa15.88■□□□□ 0.13
TRAPPC11-204ENST00000505676 IL1AP01583 271 aa15.88■□□□□ 0.13
TRAPPC11-204ENST00000505676 CYC1P08574 325 aa15.88■□□□□ 0.13
TRAPPC11-204ENST00000505676 LIMS3P0CW19 117 aa15.88■□□□□ 0.13
TRAPPC11-204ENST00000505676 LIMS4P0CW20 117 aa15.88■□□□□ 0.13
TRAPPC11-204ENST00000505676 BMP4P12644 408 aa15.88■□□□□ 0.13
TRAPPC11-204ENST00000505676 ETV6P41212 452 aa15.88■□□□□ 0.13
TRAPPC11-204ENST00000505676 SOX3P41225 446 aa15.88■□□□□ 0.13
TRAPPC11-204ENST00000505676 KIRREL2Q6UWL6 708 aa15.88■□□□□ 0.13
TRAPPC11-204ENST00000505676 CADM2Q8N3J6 435 aa15.88■□□□□ 0.13
TRAPPC11-204ENST00000505676 OR4D9Q8NGE8 314 aa15.88■□□□□ 0.13
TRAPPC11-204ENST00000505676 OR13C2Q8NGS9 318 aa15.88■□□□□ 0.13
TRAPPC11-204ENST00000505676 OR4C3Q8NH37 302 aa15.88■□□□□ 0.13
TRAPPC11-204ENST00000505676 ADIPOR1Q96A54 375 aa15.88■□□□□ 0.13
TRAPPC11-204ENST00000505676 DHCR7Q9UBM7 475 aaKnown RBP15.88■□□□□ 0.13
TRAPPC11-204ENST00000505676 PILRBQ9UKJ0 227 aa15.88■□□□□ 0.13
TRAPPC11-204ENST00000505676 GSTK1Q9Y2Q3 226 aa15.88■□□□□ 0.13
TRAPPC11-204ENST00000505676 COL5A1P20908 1838 aaPredicted RBP15.88■□□□□ 0.13
TRAPPC11-204ENST00000505676 ISPDA4D126 451 aa15.87■□□□□ 0.13
TRAPPC11-204ENST00000505676 HYAL3O43820 417 aaPredicted RBP15.87■□□□□ 0.13
TRAPPC11-204ENST00000505676 SNAP47Q5SQN1 464 aa15.87■□□□□ 0.13
TRAPPC11-204ENST00000505676 SLC29A4Q7RTT9 530 aa15.87■□□□□ 0.13
TRAPPC11-204ENST00000505676 ACBD7Q8N6N7 88 aa15.87■□□□□ 0.13
TRAPPC11-204ENST00000505676 ZNF485Q8NCK3 441 aa15.87■□□□□ 0.13
TRAPPC11-204ENST00000505676 LIPHQ8WWY8 451 aa15.87■□□□□ 0.13
TRAPPC11-204ENST00000505676 COX4I2Q96KJ9 171 aa15.87■□□□□ 0.13
TRAPPC11-204ENST00000505676 ASPNQ9BXN1 380 aa15.87■□□□□ 0.13
TRAPPC11-204ENST00000505676 EXOSC4Q9NPD3 245 aaKnown RBP15.87■□□□□ 0.13
TRAPPC11-204ENST00000505676 ZNF337Q9Y3M9 751 aa15.87■□□□□ 0.13
TRAPPC11-204ENST00000505676 SPIN1Q9Y657 262 aaPredicted RBP15.87■□□□□ 0.13
TRAPPC11-204ENST00000505676 SZT2Q5T011 3432 aa15.87■□□□□ 0.13
TRAPPC11-204ENST00000505676 IGLV3-12A0A075B6K2 115 aa15.87■□□□□ 0.13
TRAPPC11-204ENST00000505676 J3QRE1 110 aa15.87■□□□□ 0.13
TRAPPC11-204ENST00000505676 J3QRK9 145 aa15.87■□□□□ 0.13
TRAPPC11-204ENST00000505676 SULT1C4O75897 302 aa15.87■□□□□ 0.13
TRAPPC11-204ENST00000505676 UTS2O95399 124 aa15.87■□□□□ 0.13
TRAPPC11-204ENST00000505676 CD53P19397 219 aa15.87■□□□□ 0.13
TRAPPC11-204ENST00000505676 RORCP51449 518 aa15.87■□□□□ 0.13
TRAPPC11-204ENST00000505676 PRPS1P60891 318 aa15.87■□□□□ 0.13
TRAPPC11-204ENST00000505676 ACTC1P68032 377 aa15.87■□□□□ 0.13
TRAPPC11-204ENST00000505676 ACTA1P68133 377 aa15.87■□□□□ 0.13
TRAPPC11-204ENST00000505676 CRYZQ08257 329 aaKnown RBP15.87■□□□□ 0.13
TRAPPC11-204ENST00000505676 PEAR1Q5VY43 1037 aaPredicted RBP15.87■□□□□ 0.13
TRAPPC11-204ENST00000505676 BPHLQ86WA6 291 aaPredicted RBP15.87■□□□□ 0.13
TRAPPC11-204ENST00000505676 OR8D2Q9GZM6 311 aa15.87■□□□□ 0.13
TRAPPC11-204ENST00000505676 LAT2Q9GZY6 243 aa15.87■□□□□ 0.13
TRAPPC11-204ENST00000505676 NUAK2Q9H093 628 aa15.87■□□□□ 0.13
TRAPPC11-204ENST00000505676 FAIMQ9NVQ4 179 aa15.87■□□□□ 0.13
TRAPPC11-204ENST00000505676 ERVK13-1Q9NX77 482 aa15.87■□□□□ 0.13
TRAPPC11-204ENST00000505676 SCN2AQ99250 2005 aa15.86■□□□□ 0.13
TRAPPC11-204ENST00000505676 ZNF264O43296 627 aa15.86■□□□□ 0.13
TRAPPC11-204ENST00000505676 FGF9P31371 208 aaPredicted RBP15.86■□□□□ 0.13
TRAPPC11-204ENST00000505676 SRSF5Q13243 272 aaKnown RBP15.86■□□□□ 0.13
TRAPPC11-204ENST00000505676 COL9A2Q14055 689 aaPredicted RBP15.86■□□□□ 0.13
TRAPPC11-204ENST00000505676 EBPQ15125 230 aaKnown RBP15.86■□□□□ 0.13
TRAPPC11-204ENST00000505676 NSDHLQ15738 373 aa15.86■□□□□ 0.13
TRAPPC11-204ENST00000505676 PLBD1Q6P4A8 553 aa15.86■□□□□ 0.13
TRAPPC11-204ENST00000505676 OR1N1Q8NGS0 311 aa15.86■□□□□ 0.13
TRAPPC11-204ENST00000505676 SAP25Q8TEE9 199 aa15.86■□□□□ 0.13
TRAPPC11-204ENST00000505676 TSLPQ969D9 159 aa15.86■□□□□ 0.13
TRAPPC11-204ENST00000505676 NXF5Q9H1B4 397 aaKnown RBP15.86■□□□□ 0.13
TRAPPC11-204ENST00000505676 ASB6Q9NWX5 421 aa15.86■□□□□ 0.13
TRAPPC11-204ENST00000505676 UGT2A1Q9Y4X1 527 aa15.86■□□□□ 0.13
TRAPPC11-204ENST00000505676 XIRP2A4UGR9 3374 aa15.86■□□□□ 0.13
TRAPPC11-204ENST00000505676 GTPBP1O00178 669 aaKnown RBP15.86■□□□□ 0.13
TRAPPC11-204ENST00000505676 EIF4E2O60573 245 aaKnown RBP15.86■□□□□ 0.13
TRAPPC11-204ENST00000505676 ONECUT2O95948 504 aa15.86■□□□□ 0.13
TRAPPC11-204ENST00000505676 TDGF1P13385 188 aa15.86■□□□□ 0.13
TRAPPC11-204ENST00000505676 RUNX1T1Q06455 604 aa15.86■□□□□ 0.13
TRAPPC11-204ENST00000505676 SKP2Q13309 424 aa15.86■□□□□ 0.13
TRAPPC11-204ENST00000505676 ITGADQ13349 1161 aa15.86■□□□□ 0.13
TRAPPC11-204ENST00000505676 LCN1P1Q5VSP4 162 aa15.86■□□□□ 0.13
TRAPPC11-204ENST00000505676 LIPKQ5VXJ0 399 aa15.86■□□□□ 0.13
TRAPPC11-204ENST00000505676 CD200R1LQ6Q8B3 271 aa15.86■□□□□ 0.13
TRAPPC11-204ENST00000505676 DPY19L2P2Q6ZN68 376 aa15.86■□□□□ 0.13
TRAPPC11-204ENST00000505676 ZBTB46Q86UZ6 589 aa15.86■□□□□ 0.13
TRAPPC11-204ENST00000505676 GPALPP1Q8IXQ4 340 aa15.86■□□□□ 0.13
TRAPPC11-204ENST00000505676 C3orf49Q96BT1 292 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms