RNA–Protein interactions for RNA: ENST00000504807.5

DDX41-204, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-204ENST00000504807 SMAD9O15198 467 aaKnown RBP11.67□□□□□ -0.54
DDX41-204ENST00000504807 ZNF264O43296 627 aa11.67□□□□□ -0.54
DDX41-204ENST00000504807 SYNGR4O95473 234 aa11.67□□□□□ -0.54
DDX41-204ENST00000504807 CPSF4O95639 269 aaKnown RBP11.67□□□□□ -0.54
DDX41-204ENST00000504807 NUDT14O95848 222 aa11.67□□□□□ -0.54
DDX41-204ENST00000504807 PLGP00747 810 aaPredicted RBP11.67□□□□□ -0.54
DDX41-204ENST00000504807 UBL4AP11441 157 aa11.67□□□□□ -0.54
DDX41-204ENST00000504807 ELK4P28324 431 aa11.67□□□□□ -0.54
DDX41-204ENST00000504807 SUMO3P55854 103 aaPredicted RBP11.67□□□□□ -0.54
DDX41-204ENST00000504807 DMTNQ08495 405 aa11.67□□□□□ -0.54
DDX41-204ENST00000504807 CASP8Q14790 479 aa11.67□□□□□ -0.54
DDX41-204ENST00000504807 ACKR1Q16570 336 aa11.67□□□□□ -0.54
DDX41-204ENST00000504807 SMU1Q2TAY7 513 aa11.67□□□□□ -0.54
DDX41-204ENST00000504807 FRRS1Q6ZNA5 592 aa11.67□□□□□ -0.54
DDX41-204ENST00000504807 TMCO5AQ8N6Q1 288 aa11.67□□□□□ -0.54
DDX41-204ENST00000504807 ANKRD42Q8N9B4 389 aa11.67□□□□□ -0.54
DDX41-204ENST00000504807 FAM71CQ8NEG0 241 aa11.67□□□□□ -0.54
DDX41-204ENST00000504807 OR5W2Q8NH69 310 aa11.67□□□□□ -0.54
DDX41-204ENST00000504807 RAB3IL1Q8TBN0 382 aa11.67□□□□□ -0.54
DDX41-204ENST00000504807 MIPOL1Q8TD10 442 aa11.67□□□□□ -0.54
DDX41-204ENST00000504807 ZFP90Q8TF47 636 aa11.67□□□□□ -0.54
DDX41-204ENST00000504807 ZNF775Q96BV0 537 aaPredicted RBP11.67□□□□□ -0.54
DDX41-204ENST00000504807 MOAP1Q96BY2 351 aa11.67□□□□□ -0.54
DDX41-204ENST00000504807 ZNF300Q96RE9 604 aaPredicted RBP11.67□□□□□ -0.54
DDX41-204ENST00000504807 PSD2Q9BQI7 771 aa11.67□□□□□ -0.54
DDX41-204ENST00000504807 ACTR6Q9GZN1 396 aa11.67□□□□□ -0.54
DDX41-204ENST00000504807 NMUR2Q9GZQ4 415 aa11.67□□□□□ -0.54
DDX41-204ENST00000504807 CENPHQ9H3R5 247 aa11.67□□□□□ -0.54
DDX41-204ENST00000504807 MEAF6Q9HAF1 191 aa11.67□□□□□ -0.54
DDX41-204ENST00000504807 PRSS50Q9UI38 385 aa11.67□□□□□ -0.54
DDX41-204ENST00000504807 EMC9Q9Y3B6 208 aa11.67□□□□□ -0.54
DDX41-204ENST00000504807 HEATR5AQ86XA9 2040 aa11.67□□□□□ -0.54
DDX41-204ENST00000504807 GOLGA8QA0A0J9YX86 632 aa11.66□□□□□ -0.54
DDX41-204ENST00000504807 GOLGA8OA6NCC3 632 aa11.66□□□□□ -0.54
DDX41-204ENST00000504807 GOLGA8NF8WBI6 632 aa11.66□□□□□ -0.54
DDX41-204ENST00000504807 GTPBP1O00178 669 aaKnown RBP11.66□□□□□ -0.54
DDX41-204ENST00000504807 TM9SF1O15321 606 aa11.66□□□□□ -0.54
DDX41-204ENST00000504807 KIAA0513O60268 411 aa11.66□□□□□ -0.54
DDX41-204ENST00000504807 MYZAPP0CAP1 466 aa11.66□□□□□ -0.54
DDX41-204ENST00000504807 UBTFL6P0CB48 400 aaPredicted RBP11.66□□□□□ -0.54
DDX41-204ENST00000504807 DDX5P17844 614 aaKnown RBP11.66□□□□□ -0.54
DDX41-204ENST00000504807 NTF4P34130 210 aa11.66□□□□□ -0.54
DDX41-204ENST00000504807 PGM1P36871 562 aa11.66□□□□□ -0.54
DDX41-204ENST00000504807 EIF1P41567 113 aaKnown RBP11.66□□□□□ -0.54
DDX41-204ENST00000504807 CCR4P51679 360 aa11.66□□□□□ -0.54
DDX41-204ENST00000504807 CTBP2P56545 445 aa11.66□□□□□ -0.54
DDX41-204ENST00000504807 SESN3P58005 492 aa11.66□□□□□ -0.54
DDX41-204ENST00000504807 STX3Q13277 289 aa11.66□□□□□ -0.54
DDX41-204ENST00000504807 FGFBP1Q14512 234 aa11.66□□□□□ -0.54
DDX41-204ENST00000504807 FAM174BQ3ZCQ3 159 aa11.66□□□□□ -0.54
DDX41-204ENST00000504807 TIGD2Q4W5G0 525 aa11.66□□□□□ -0.54
DDX41-204ENST00000504807 COX20Q5RI15 118 aa11.66□□□□□ -0.54
DDX41-204ENST00000504807 WFDC8Q8IUA0 241 aa11.66□□□□□ -0.54
DDX41-204ENST00000504807 ZNF619Q8N2I2 560 aa11.66□□□□□ -0.54
DDX41-204ENST00000504807 NATD1Q8N6N6 113 aa11.66□□□□□ -0.54
DDX41-204ENST00000504807 ANKFN1Q8N957 763 aa11.66□□□□□ -0.54
DDX41-204ENST00000504807 ZNF527Q8NB42 609 aa11.66□□□□□ -0.54
DDX41-204ENST00000504807 NEUROG1Q92886 237 aa11.66□□□□□ -0.54
DDX41-204ENST00000504807 PIGTQ969N2 578 aa11.66□□□□□ -0.54
DDX41-204ENST00000504807 TESCQ96BS2 214 aa11.66□□□□□ -0.54
DDX41-204ENST00000504807 S100PBPQ96BU1 408 aa11.66□□□□□ -0.54
DDX41-204ENST00000504807 PRPF18Q99633 342 aaKnown RBP11.66□□□□□ -0.54
DDX41-204ENST00000504807 TMEM204Q9BSN7 226 aa11.66□□□□□ -0.54
DDX41-204ENST00000504807 DPY30Q9C005 99 aa11.66□□□□□ -0.54
DDX41-204ENST00000504807 HOXD1Q9GZZ0 328 aa11.66□□□□□ -0.54
DDX41-204ENST00000504807 KCNK9Q9NPC2 374 aa11.66□□□□□ -0.54
DDX41-204ENST00000504807 AIG1Q9NVV5 245 aa11.66□□□□□ -0.54
DDX41-204ENST00000504807 ZNF226Q9NYT6 803 aa11.66□□□□□ -0.54
DDX41-204ENST00000504807 KLHL13Q9P2N7 655 aa11.66□□□□□ -0.54
DDX41-204ENST00000504807 MARCOQ9UEW3 520 aaPredicted RBP11.66□□□□□ -0.54
DDX41-204ENST00000504807 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.66□□□□□ -0.54
DDX41-204ENST00000504807 GPC6Q9Y625 555 aaPredicted RBP11.66□□□□□ -0.54
DDX41-204ENST00000504807 TGP01266 2768 aa11.65□□□□□ -0.54
DDX41-204ENST00000504807 PRSS51A0A1B0GVH4 220 aa11.65□□□□□ -0.54
DDX41-204ENST00000504807 HMGN4O00479 90 aa11.65□□□□□ -0.54
DDX41-204ENST00000504807 AP3D1O14617 1153 aa11.65□□□□□ -0.54
DDX41-204ENST00000504807 EIF4E2O60573 245 aaKnown RBP11.65□□□□□ -0.54
DDX41-204ENST00000504807 RAMP1O60894 148 aa11.65□□□□□ -0.54
DDX41-204ENST00000504807 SNNO75324 88 aaPredicted RBP11.65□□□□□ -0.54
DDX41-204ENST00000504807 STX11O75558 287 aa11.65□□□□□ -0.54
DDX41-204ENST00000504807 CYP7B1O75881 506 aa11.65□□□□□ -0.54
DDX41-204ENST00000504807 CHRM4P08173 479 aa11.65□□□□□ -0.54
DDX41-204ENST00000504807 KRT16P08779 473 aa11.65□□□□□ -0.54
DDX41-204ENST00000504807 LBPP18428 481 aa11.65□□□□□ -0.54
DDX41-204ENST00000504807 PSMB1P20618 241 aaKnown RBP11.65□□□□□ -0.54
DDX41-204ENST00000504807 ME2P23368 584 aa11.65□□□□□ -0.54
DDX41-204ENST00000504807 ADH6P28332 368 aa11.65□□□□□ -0.54
DDX41-204ENST00000504807 EPHA3P29320 983 aa11.65□□□□□ -0.54
DDX41-204ENST00000504807 CHRNEQ04844 493 aa11.65□□□□□ -0.54
DDX41-204ENST00000504807 SELENBP1Q13228 472 aa11.65□□□□□ -0.54
DDX41-204ENST00000504807 MAD2L1Q13257 205 aaPredicted RBP11.65□□□□□ -0.54
DDX41-204ENST00000504807 SYPL1Q16563 259 aa11.65□□□□□ -0.54
DDX41-204ENST00000504807 AP1ARQ63HQ0 302 aa11.65□□□□□ -0.54
DDX41-204ENST00000504807 OGFOD2Q6N063 350 aa11.65□□□□□ -0.54
DDX41-204ENST00000504807 FCRLAQ7L513 359 aa11.65□□□□□ -0.54
DDX41-204ENST00000504807 MAPK1IP1LQ8NDC0 245 aa11.65□□□□□ -0.54
DDX41-204ENST00000504807 MGARPQ8TDB4 240 aa11.65□□□□□ -0.54
DDX41-204ENST00000504807 XAGE5Q8WWM1 108 aa11.65□□□□□ -0.54
DDX41-204ENST00000504807 CPNE4Q96A23 557 aaPredicted RBP11.65□□□□□ -0.54
DDX41-204ENST00000504807 ROPN1LQ96C74 230 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms