RNA–Protein interactions for RNA: ENST00000504220.6

PCDH11X-208, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-208ENST00000504220 GPN1Q9HCN4 374 aaPredicted RBP3.43□□□□□ -1.86
PCDH11X-208ENST00000504220 CD320Q9NPF0 282 aa3.43□□□□□ -1.86
PCDH11X-208ENST00000504220 CLEC5AQ9NY25 188 aa3.43□□□□□ -1.86
PCDH11X-208ENST00000504220 MARK1Q9P0L2 795 aa3.43□□□□□ -1.86
PCDH11X-208ENST00000504220 MYEF2Q9P2K5 600 aaKnown RBP3.43□□□□□ -1.86
PCDH11X-208ENST00000504220 NLKQ9UBE8 527 aa3.43□□□□□ -1.86
PCDH11X-208ENST00000504220 PLEKHA6Q9Y2H5 1048 aa3.43□□□□□ -1.86
PCDH11X-208ENST00000504220 PADI2Q9Y2J8 665 aa3.43□□□□□ -1.86
PCDH11X-208ENST00000504220 SIP14410 1827 aa3.43□□□□□ -1.86
PCDH11X-208ENST00000504220 COL4A6Q14031 1691 aa3.43□□□□□ -1.86
PCDH11X-208ENST00000504220 CREBBPQ92793 2442 aa3.43□□□□□ -1.86
PCDH11X-208ENST00000504220 UNC80Q8N2C7 3258 aa3.43□□□□□ -1.86
PCDH11X-208ENST00000504220 CADP27708 2225 aa3.43□□□□□ -1.86
PCDH11X-208ENST00000504220 hCG_1807616A0A1W2PRN6 198 aa3.43□□□□□ -1.86
PCDH11X-208ENST00000504220 M0R036 132 aa3.43□□□□□ -1.86
PCDH11X-208ENST00000504220 TLR4O00206 839 aa3.43□□□□□ -1.86
PCDH11X-208ENST00000504220 EIF1AYO14602 144 aaKnown RBP3.43□□□□□ -1.86
PCDH11X-208ENST00000504220 KLF11O14901 512 aa3.43□□□□□ -1.86
PCDH11X-208ENST00000504220 SPINT1O43278 529 aa3.43□□□□□ -1.86
PCDH11X-208ENST00000504220 SLC25A17O43808 307 aa3.43□□□□□ -1.86
PCDH11X-208ENST00000504220 OR2B3O76000 313 aa3.43□□□□□ -1.86
PCDH11X-208ENST00000504220 F13BP05160 661 aa3.43□□□□□ -1.86
PCDH11X-208ENST00000504220 ADRA2AP08913 450 aa3.43□□□□□ -1.86
PCDH11X-208ENST00000504220 ZDHHC11BP0C7U3 371 aa3.43□□□□□ -1.86
PCDH11X-208ENST00000504220 ACP5P13686 325 aa3.43□□□□□ -1.86
PCDH11X-208ENST00000504220 ZNF10P21506 573 aaPredicted RBP3.43□□□□□ -1.86
PCDH11X-208ENST00000504220 CRHBPP24387 322 aa3.43□□□□□ -1.86
PCDH11X-208ENST00000504220 KIR2DL3P43628 341 aa3.43□□□□□ -1.86
PCDH11X-208ENST00000504220 DNASE1L1P49184 302 aa3.43□□□□□ -1.86
PCDH11X-208ENST00000504220 RBP2P50120 134 aa3.43□□□□□ -1.86
PCDH11X-208ENST00000504220 TAS2R50P59544 299 aa3.43□□□□□ -1.86
PCDH11X-208ENST00000504220 CXCR4P61073 352 aa3.43□□□□□ -1.86
PCDH11X-208ENST00000504220 FGFBP1Q14512 234 aa3.43□□□□□ -1.86
PCDH11X-208ENST00000504220 SMCO1Q147U7 214 aa3.43□□□□□ -1.86
PCDH11X-208ENST00000504220 OR8G1Q15617 311 aa3.43□□□□□ -1.86
PCDH11X-208ENST00000504220 GUCA2BQ16661 112 aa3.43□□□□□ -1.86
PCDH11X-208ENST00000504220 C18orf21Q32NC0 220 aaPredicted RBP3.43□□□□□ -1.86
PCDH11X-208ENST00000504220 LBHQ53QV2 105 aaPredicted RBP3.43□□□□□ -1.86
PCDH11X-208ENST00000504220 C2orf27AQ580R0 203 aa3.43□□□□□ -1.86
PCDH11X-208ENST00000504220 ZNF789Q5FWF6 425 aa3.43□□□□□ -1.86
PCDH11X-208ENST00000504220 PRAMEF17Q5VTA0 474 aa3.43□□□□□ -1.86
PCDH11X-208ENST00000504220 C22orf42Q6IC83 251 aa3.43□□□□□ -1.86
PCDH11X-208ENST00000504220 CEACAM20Q6UY09 585 aa3.43□□□□□ -1.86
PCDH11X-208ENST00000504220 GLCCI1Q86VQ1 547 aa3.43□□□□□ -1.86
PCDH11X-208ENST00000504220 NPAS3Q8IXF0 933 aa3.43□□□□□ -1.86
PCDH11X-208ENST00000504220 CMTM8Q8IZV2 173 aa3.43□□□□□ -1.86
PCDH11X-208ENST00000504220 NXPE1Q8N323 547 aa3.43□□□□□ -1.86
PCDH11X-208ENST00000504220 JAGN1Q8N5M9 183 aa3.43□□□□□ -1.86
PCDH11X-208ENST00000504220 TRAM1L1Q8N609 369 aa3.43□□□□□ -1.86
PCDH11X-208ENST00000504220 OR1M1Q8NGA1 313 aa3.43□□□□□ -1.86
PCDH11X-208ENST00000504220 OR5T2Q8NGG2 359 aa3.43□□□□□ -1.86
PCDH11X-208ENST00000504220 OR51L1Q8NGJ5 315 aa3.43□□□□□ -1.86
PCDH11X-208ENST00000504220 OR10T2Q8NGX3 314 aa3.43□□□□□ -1.86
PCDH11X-208ENST00000504220 OR51A7Q8NH64 312 aa3.43□□□□□ -1.86
PCDH11X-208ENST00000504220 PIGXQ8TBF5 258 aa3.43□□□□□ -1.86
PCDH11X-208ENST00000504220 CSGALNACT1Q8TDX6 532 aa3.43□□□□□ -1.86
PCDH11X-208ENST00000504220 C2CD4CQ8TF44 421 aa3.43□□□□□ -1.86
PCDH11X-208ENST00000504220 CYB5D2Q8WUJ1 264 aa3.43□□□□□ -1.86
PCDH11X-208ENST00000504220 GAL3ST3Q96A11 431 aa3.43□□□□□ -1.86
PCDH11X-208ENST00000504220 SLC30A2Q9BRI3 323 aa3.43□□□□□ -1.86
PCDH11X-208ENST00000504220 CRB3Q9BUF7 120 aa3.43□□□□□ -1.86
PCDH11X-208ENST00000504220 TSSK6Q9BXA6 273 aa3.43□□□□□ -1.86
PCDH11X-208ENST00000504220 RBCK1Q9BYM8 510 aa3.43□□□□□ -1.86
PCDH11X-208ENST00000504220 PIGUQ9H490 435 aa3.43□□□□□ -1.86
PCDH11X-208ENST00000504220 MS4A12Q9NXJ0 267 aa3.43□□□□□ -1.86
PCDH11X-208ENST00000504220 TAS2R10Q9NYW0 307 aa3.43□□□□□ -1.86
PCDH11X-208ENST00000504220 MARCH4Q9P2E8 410 aaPredicted RBP3.43□□□□□ -1.86
PCDH11X-208ENST00000504220 METTL1Q9UBP6 276 aaKnown RBP3.43□□□□□ -1.86
PCDH11X-208ENST00000504220 VPS29Q9UBQ0 182 aa3.43□□□□□ -1.86
PCDH11X-208ENST00000504220 SIX4Q9UIU6 781 aa3.43□□□□□ -1.86
PCDH11X-208ENST00000504220 KCNG2Q9UJ96 466 aa3.43□□□□□ -1.86
PCDH11X-208ENST00000504220 CORO2BQ9UQ03 480 aa3.43□□□□□ -1.86
PCDH11X-208ENST00000504220 RNF215Q9Y6U7 377 aa3.43□□□□□ -1.86
PCDH11X-208ENST00000504220 KIAA1671Q9BY89 1806 aa3.43□□□□□ -1.86
PCDH11X-208ENST00000504220 PTPRSQ13332 1948 aa3.43□□□□□ -1.86
PCDH11X-208ENST00000504220 COL1A2P08123 1366 aa3.43□□□□□ -1.86
PCDH11X-208ENST00000504220 A0A1W2PRU2 124 aa3.43□□□□□ -1.86
PCDH11X-208ENST00000504220 TCRBV21S2A2A0A5A6 115 aa3.43□□□□□ -1.86
PCDH11X-208ENST00000504220 TXNL1O43396 289 aa3.43□□□□□ -1.86
PCDH11X-208ENST00000504220 CDC40O60508 579 aaKnown RBP eCLIP3.43□□□□□ -1.86
PCDH11X-208ENST00000504220 ESR1P03372 595 aa3.43□□□□□ -1.86
PCDH11X-208ENST00000504220 SELPP16109 830 aa3.43□□□□□ -1.86
PCDH11X-208ENST00000504220 AGXTP21549 392 aa3.43□□□□□ -1.86
PCDH11X-208ENST00000504220 ACADLP28330 430 aa3.43□□□□□ -1.86
PCDH11X-208ENST00000504220 DNAJA1P31689 397 aaKnown RBP3.43□□□□□ -1.86
PCDH11X-208ENST00000504220 FAUP35544 74 aaKnown RBP3.43□□□□□ -1.86
PCDH11X-208ENST00000504220 ACVR1BP36896 505 aa3.43□□□□□ -1.86
PCDH11X-208ENST00000504220 MAGEA2P43356 314 aa3.43□□□□□ -1.86
PCDH11X-208ENST00000504220 BDKRB1P46663 353 aa3.43□□□□□ -1.86
PCDH11X-208ENST00000504220 HTR6P50406 440 aa3.43□□□□□ -1.86
PCDH11X-208ENST00000504220 NCBP2P52298 156 aaKnown RBP eCLIP3.43□□□□□ -1.86
PCDH11X-208ENST00000504220 CDK6Q00534 326 aa3.43□□□□□ -1.86
PCDH11X-208ENST00000504220 HEPACAMQ14CZ8 416 aa3.43□□□□□ -1.86
PCDH11X-208ENST00000504220 TAF1AQ15573 450 aaPredicted RBP3.43□□□□□ -1.86
PCDH11X-208ENST00000504220 ATP6AP1Q15904 470 aa3.43□□□□□ -1.86
PCDH11X-208ENST00000504220 SSX2Q16385 188 aa3.43□□□□□ -1.86
PCDH11X-208ENST00000504220 FRG2Q64ET8 278 aa3.43□□□□□ -1.86
PCDH11X-208ENST00000504220 SFRP4Q6FHJ7 346 aaPredicted RBP3.43□□□□□ -1.86
PCDH11X-208ENST00000504220 XKRXQ6PP77 449 aa3.43□□□□□ -1.86
PCDH11X-208ENST00000504220 CERS6Q6ZMG9 384 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms