RNA–Protein interactions for RNA: ENST00000502820.1

HTT-202, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 287 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-202ENST00000502820 LINC01560Q8TB33 94 aa4.76□□□□□ -1.65
HTT-202ENST00000502820 STAG3L4Q8TBR4 150 aa4.76□□□□□ -1.65
HTT-202ENST00000502820 ZNF675Q8TD23 568 aa4.76□□□□□ -1.65
HTT-202ENST00000502820 UTP15Q8TED0 518 aaKnown RBP4.76□□□□□ -1.65
HTT-202ENST00000502820 ASZ1Q8WWH4 475 aa4.76□□□□□ -1.65
HTT-202ENST00000502820 SLC13A3Q8WWT9 602 aa4.76□□□□□ -1.65
HTT-202ENST00000502820 ASB13Q8WXK3 278 aa4.76□□□□□ -1.65
HTT-202ENST00000502820 PTP4A1Q93096 173 aa4.76□□□□□ -1.65
HTT-202ENST00000502820 FAM162AQ96A26 154 aa4.76□□□□□ -1.65
HTT-202ENST00000502820 PYURFQ96I23 114 aa4.76□□□□□ -1.65
HTT-202ENST00000502820 PPP1R36Q96LQ0 422 aa4.76□□□□□ -1.65
HTT-202ENST00000502820 ZNF354BQ96LW1 612 aa4.76□□□□□ -1.65
HTT-202ENST00000502820 CITED4Q96RK1 184 aa4.76□□□□□ -1.65
HTT-202ENST00000502820 BBS4Q96RK4 519 aa4.76□□□□□ -1.65
HTT-202ENST00000502820 ZNF382Q96SR6 550 aa4.76□□□□□ -1.65
HTT-202ENST00000502820 C7orf50Q9BRJ6 194 aaKnown RBP4.76□□□□□ -1.65
HTT-202ENST00000502820 TTYH2Q9BSA4 534 aa4.76□□□□□ -1.65
HTT-202ENST00000502820 MARVELD1Q9BSK0 173 aa4.76□□□□□ -1.65
HTT-202ENST00000502820 SRRQ9GZT4 340 aa4.76□□□□□ -1.65
HTT-202ENST00000502820 FN3KQ9H479 309 aa4.76□□□□□ -1.65
HTT-202ENST00000502820 LDAHQ9H6V9 325 aa4.76□□□□□ -1.65
HTT-202ENST00000502820 TRIM45Q9H8W5 580 aaPredicted RBP4.76□□□□□ -1.65
HTT-202ENST00000502820 WDR54Q9H977 334 aa4.76□□□□□ -1.65
HTT-202ENST00000502820 ISYNA1Q9NPH2 558 aa4.76□□□□□ -1.65
HTT-202ENST00000502820 POLE4Q9NR33 117 aa4.76□□□□□ -1.65
HTT-202ENST00000502820 KRT84Q9NSB2 600 aa4.76□□□□□ -1.65
HTT-202ENST00000502820 CATSPERZQ9NTU4 200 aa4.76□□□□□ -1.65
HTT-202ENST00000502820 ERVK-18Q9QC07 812 aa4.76□□□□□ -1.65
HTT-202ENST00000502820 TRPC4Q9UBN4 977 aa4.76□□□□□ -1.65
HTT-202ENST00000502820 ZNF282Q9UDV7 671 aaPredicted RBP4.76□□□□□ -1.65
HTT-202ENST00000502820 TMEFF2Q9UIK5 374 aaPredicted RBP4.76□□□□□ -1.65
HTT-202ENST00000502820 POFUT2Q9Y2G5 429 aa4.76□□□□□ -1.65
HTT-202ENST00000502820 PRELID3BQ9Y3B1 194 aa4.76□□□□□ -1.65
HTT-202ENST00000502820 CMAHPQ9Y471 501 aa4.76□□□□□ -1.65
HTT-202ENST00000502820 MAB21L2Q9Y586 359 aa4.76□□□□□ -1.65
HTT-202ENST00000502820 PCDHB14Q9Y5E9 798 aa4.76□□□□□ -1.65
HTT-202ENST00000502820 TNPO3Q9Y5L0 923 aaKnown RBP4.76□□□□□ -1.65
HTT-202ENST00000502820 U3KQ87 197 aa4.76□□□□□ -1.65
HTT-202ENST00000502820 JMJD1CQ15652 2540 aa4.76□□□□□ -1.65
HTT-202ENST00000502820 MDC1Q14676 2089 aaKnown RBP4.76□□□□□ -1.65
HTT-202ENST00000502820 PIKFYVEQ9Y2I7 2098 aa4.76□□□□□ -1.65
HTT-202ENST00000502820 CSPG4Q6UVK1 2322 aa4.75□□□□□ -1.65
HTT-202ENST00000502820 ACANP16112 2415 aa4.75□□□□□ -1.65
HTT-202ENST00000502820 IGHV1-45A0A0A0MS14 117 aa4.75□□□□□ -1.65
HTT-202ENST00000502820 A0A0G2JMP0 313 aa4.75□□□□□ -1.65
HTT-202ENST00000502820 B4DXG7 233 aa4.75□□□□□ -1.65
HTT-202ENST00000502820 E5RI56 91 aa4.75□□□□□ -1.65
HTT-202ENST00000502820 ABCD4O14678 606 aa4.75□□□□□ -1.65
HTT-202ENST00000502820 APOL3O95236 402 aa4.75□□□□□ -1.65
HTT-202ENST00000502820 ECDO95905 644 aaPredicted RBP4.75□□□□□ -1.65
HTT-202ENST00000502820 S1PR4O95977 384 aa4.75□□□□□ -1.65
HTT-202ENST00000502820 DHFRP00374 187 aa4.75□□□□□ -1.65
HTT-202ENST00000502820 PAHP00439 452 aa4.75□□□□□ -1.65
HTT-202ENST00000502820 LALBAP00709 142 aa4.75□□□□□ -1.65
HTT-202ENST00000502820 SERPINA1P01009 418 aa4.75□□□□□ -1.65
HTT-202ENST00000502820 ESR1P03372 595 aa4.75□□□□□ -1.65
HTT-202ENST00000502820 SCG5P05408 212 aa4.75□□□□□ -1.65
HTT-202ENST00000502820 PGRP06401 933 aa4.75□□□□□ -1.65
HTT-202ENST00000502820 ADORA3P0DMS8 318 aa4.75□□□□□ -1.65
HTT-202ENST00000502820 DBTP11182 482 aaKnown RBP4.75□□□□□ -1.65
HTT-202ENST00000502820 ERGP11308 486 aa4.75□□□□□ -1.65
HTT-202ENST00000502820 ANXA3P12429 323 aa4.75□□□□□ -1.65
HTT-202ENST00000502820 ICAM2P13598 275 aa4.75□□□□□ -1.65
HTT-202ENST00000502820 ATF4P18848 351 aaPredicted RBP4.75□□□□□ -1.65
HTT-202ENST00000502820 HK1P19367 917 aa4.75□□□□□ -1.65
HTT-202ENST00000502820 TNNI3P19429 210 aa4.75□□□□□ -1.65
HTT-202ENST00000502820 BMP5P22003 454 aa4.75□□□□□ -1.65
HTT-202ENST00000502820 FBLP22087 321 aaKnown RBP4.75□□□□□ -1.65
HTT-202ENST00000502820 CHMP24386 653 aa4.75□□□□□ -1.65
HTT-202ENST00000502820 GADD45AP24522 165 aa4.75□□□□□ -1.65
HTT-202ENST00000502820 PSMA1P25786 263 aaKnown RBP4.75□□□□□ -1.65
HTT-202ENST00000502820 MAPK1P28482 360 aa4.75□□□□□ -1.65
HTT-202ENST00000502820 TNFSF8P32971 234 aa4.75□□□□□ -1.65
HTT-202ENST00000502820 SDC2P34741 201 aa4.75□□□□□ -1.65
HTT-202ENST00000502820 GGT2P36268 569 aa4.75□□□□□ -1.65
HTT-202ENST00000502820 RFX2P48378 723 aa4.75□□□□□ -1.65
HTT-202ENST00000502820 PIK3CGP48736 1102 aa4.75□□□□□ -1.65
HTT-202ENST00000502820 HOXA1P49639 335 aaPredicted RBP4.75□□□□□ -1.65
HTT-202ENST00000502820 EFNA3P52797 238 aa4.75□□□□□ -1.65
HTT-202ENST00000502820 GPR85P60893 370 aa4.75□□□□□ -1.65
HTT-202ENST00000502820 PLGLB1Q02325 96 aa4.75□□□□□ -1.65
HTT-202ENST00000502820 COX10Q12887 443 aa4.75□□□□□ -1.65
HTT-202ENST00000502820 HYAL2Q12891 473 aa4.75□□□□□ -1.65
HTT-202ENST00000502820 NPRL3Q12980 569 aa4.75□□□□□ -1.65
HTT-202ENST00000502820 VEZF1Q14119 521 aa4.75□□□□□ -1.65
HTT-202ENST00000502820 CSHL1Q14406 222 aa4.75□□□□□ -1.65
HTT-202ENST00000502820 CAPRIN1Q14444 709 aaKnown RBP4.75□□□□□ -1.65
HTT-202ENST00000502820 GRM7Q14831 915 aa4.75□□□□□ -1.65
HTT-202ENST00000502820 BAK1Q16611 211 aa4.75□□□□□ -1.65
HTT-202ENST00000502820 PPP1R3AQ16821 1122 aa4.75□□□□□ -1.65
HTT-202ENST00000502820 GLYR1Q49A26 553 aaPredicted RBP4.75□□□□□ -1.65
HTT-202ENST00000502820 MINDY4Q4G0A6 757 aa4.75□□□□□ -1.65
HTT-202ENST00000502820 FLYWCH1Q4VC44 716 aa4.75□□□□□ -1.65
HTT-202ENST00000502820 UNC50Q53HI1 259 aa4.75□□□□□ -1.65
HTT-202ENST00000502820 RABL3Q5HYI8 236 aa4.75□□□□□ -1.65
HTT-202ENST00000502820 RNFT1Q5M7Z0 435 aa4.75□□□□□ -1.65
HTT-202ENST00000502820 CTSL3PQ5NE16 218 aa4.75□□□□□ -1.65
HTT-202ENST00000502820 CLVS2Q5SYC1 327 aa4.75□□□□□ -1.65
HTT-202ENST00000502820 LRIF1Q5T3J3 769 aa4.75□□□□□ -1.65
HTT-202ENST00000502820 CD276Q5ZPR3 534 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms