RNA–Protein interactions for RNA: ENST00000498658.5

FXR1-222, Transcript of FMR1 autosomal homolog 1, human

TSL 2

Gene FXR1, Length 683 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FXR1-222	ENST00000498658		H0YC42	278 aa		9.44	□□□□□ -0.9
FXR1-222	ENST00000498658	TNFSF11	O14788	317 aa		9.44	□□□□□ -0.9
FXR1-222	ENST00000498658	ANGPT2	O15123	496 aa		9.44	□□□□□ -0.9
FXR1-222	ENST00000498658	OIP5	O43482	229 aa		9.44	□□□□□ -0.9
FXR1-222	ENST00000498658	TNFSF13	O75888	250 aa		9.44	□□□□□ -0.9
FXR1-222	ENST00000498658	NTN1	O95631	604 aa		9.44	□□□□□ -0.9
FXR1-222	ENST00000498658	THBS1	P07996	1170 aa		9.44	□□□□□ -0.9
FXR1-222	ENST00000498658	CHRM4	P08173	479 aa		9.44	□□□□□ -0.9
FXR1-222	ENST00000498658	TFPT	P0C1Z6	253 aa		9.44	□□□□□ -0.9
FXR1-222	ENST00000498658	ETFA	P13804	333 aa		9.44	□□□□□ -0.9
FXR1-222	ENST00000498658	NID1	P14543	1247 aa		9.44	□□□□□ -0.9
FXR1-222	ENST00000498658	MAP2K6	P52564	334 aa		9.44	□□□□□ -0.9
FXR1-222	ENST00000498658	AGFG1	P52594	562 aa	Known RBP	9.44	□□□□□ -0.9
FXR1-222	ENST00000498658	MVD	P53602	400 aa		9.44	□□□□□ -0.9
FXR1-222	ENST00000498658	TPD52	P55327	224 aa	Predicted RBP	9.44	□□□□□ -0.9
FXR1-222	ENST00000498658	DLX5	P56178	289 aa		9.44	□□□□□ -0.9
FXR1-222	ENST00000498658	TLE4	Q04727	773 aa		9.44	□□□□□ -0.9
FXR1-222	ENST00000498658	MYBPH	Q13203	477 aa		9.44	□□□□□ -0.9
FXR1-222	ENST00000498658	LARS2	Q15031	903 aa	Known RBP	9.44	□□□□□ -0.9
FXR1-222	ENST00000498658	RNPS1	Q15287	305 aa	Known RBP	9.44	□□□□□ -0.9
FXR1-222	ENST00000498658	RGN	Q15493	299 aa		9.44	□□□□□ -0.9
FXR1-222	ENST00000498658	MAPK14	Q16539	360 aa		9.44	□□□□□ -0.9
FXR1-222	ENST00000498658	CTU2	Q2VPK5	515 aa	Known RBP	9.44	□□□□□ -0.9
FXR1-222	ENST00000498658	NDUFAF6	Q330K2	333 aa		9.44	□□□□□ -0.9
FXR1-222	ENST00000498658	LIN52	Q52LA3	116 aa		9.44	□□□□□ -0.9
FXR1-222	ENST00000498658	PPP4R4	Q6NUP7	873 aa		9.44	□□□□□ -0.9
FXR1-222	ENST00000498658	C3orf33	Q6P1S2	294 aa		9.44	□□□□□ -0.9
FXR1-222	ENST00000498658	GRINA	Q7Z429	371 aa		9.44	□□□□□ -0.9
FXR1-222	ENST00000498658	ZNF295-AS1	Q8N0V1	137 aa		9.44	□□□□□ -0.9
FXR1-222	ENST00000498658	GCNT2	Q8N0V5	402 aa		9.44	□□□□□ -0.9
FXR1-222	ENST00000498658	ANKFN1	Q8N957	763 aa		9.44	□□□□□ -0.9
FXR1-222	ENST00000498658	FAM222B	Q8WU58	562 aa		9.44	□□□□□ -0.9
FXR1-222	ENST00000498658	SLC25A43	Q8WUT9	341 aa	Predicted RBP	9.44	□□□□□ -0.9
FXR1-222	ENST00000498658	SLC38A5	Q8WUX1	472 aa		9.44	□□□□□ -0.9
FXR1-222	ENST00000498658	WDR60	Q8WVS4	1066 aa		9.44	□□□□□ -0.9
FXR1-222	ENST00000498658	GMPPA	Q96IJ6	420 aa	Predicted RBP	9.44	□□□□□ -0.9
FXR1-222	ENST00000498658	ZNF845	Q96IR2	970 aa	Predicted RBP	9.44	□□□□□ -0.9
FXR1-222	ENST00000498658	ADGRG7	Q96K78	797 aa		9.44	□□□□□ -0.9
FXR1-222	ENST00000498658	SLC39A3	Q9BRY0	314 aa		9.44	□□□□□ -0.9
FXR1-222	ENST00000498658	RBM24	Q9BX46	236 aa	Known RBP	9.44	□□□□□ -0.9
FXR1-222	ENST00000498658	PAIP1	Q9H074	479 aa	Known RBP	9.44	□□□□□ -0.9
FXR1-222	ENST00000498658	MCCC2	Q9HCC0	563 aa		9.44	□□□□□ -0.9
FXR1-222	ENST00000498658	GP6	Q9HCN6	339 aa		9.44	□□□□□ -0.9
FXR1-222	ENST00000498658	FANCF	Q9NPI8	374 aa		9.44	□□□□□ -0.9
FXR1-222	ENST00000498658	SLC6A13	Q9NSD5	602 aa		9.44	□□□□□ -0.9
FXR1-222	ENST00000498658	ACER3	Q9NUN7	267 aa		9.44	□□□□□ -0.9
FXR1-222	ENST00000498658	LEF1	Q9UJU2	399 aa	Predicted RBP	9.44	□□□□□ -0.9
FXR1-222	ENST00000498658	IFT52	Q9Y366	437 aa		9.44	□□□□□ -0.9
FXR1-222	ENST00000498658	NDUFAF1	Q9Y375	327 aa		9.44	□□□□□ -0.9
FXR1-222	ENST00000498658	EMC9	Q9Y3B6	208 aa		9.44	□□□□□ -0.9
FXR1-222	ENST00000498658	TEX15	Q9BXT5	2789 aa		9.44	□□□□□ -0.9
FXR1-222	ENST00000498658	DCHS2	Q6V1P9	2916 aa		9.44	□□□□□ -0.9
FXR1-222	ENST00000498658	APC	P25054	2843 aa		9.43	□□□□□ -0.9
FXR1-222	ENST00000498658	KIAA1549	Q9HCM3	1950 aa		9.43	□□□□□ -0.9
FXR1-222	ENST00000498658	DSPP	Q9NZW4	1301 aa		9.43	□□□□□ -0.9
FXR1-222	ENST00000498658		A0A0J9YW62	118 aa		9.43	□□□□□ -0.9
FXR1-222	ENST00000498658	TUBAL3	A6NHL2	446 aa		9.43	□□□□□ -0.9
FXR1-222	ENST00000498658	C5orf58	C9J3I9	102 aa		9.43	□□□□□ -0.9
FXR1-222	ENST00000498658	FAAH	O00519	579 aa		9.43	□□□□□ -0.9
FXR1-222	ENST00000498658	GOSR1	O95249	250 aa		9.43	□□□□□ -0.9
FXR1-222	ENST00000498658	BCHE	P06276	602 aa		9.43	□□□□□ -0.9
FXR1-222	ENST00000498658	VIM	P08670	466 aa	Known RBP	9.43	□□□□□ -0.9
FXR1-222	ENST00000498658	CD8B	P10966	210 aa		9.43	□□□□□ -0.9
FXR1-222	ENST00000498658	BMP2	P12643	396 aa		9.43	□□□□□ -0.9
FXR1-222	ENST00000498658	PRF1	P14222	555 aa		9.43	□□□□□ -0.9
FXR1-222	ENST00000498658	RPS4Y1	P22090	263 aa	Known RBP	9.43	□□□□□ -0.9
FXR1-222	ENST00000498658	SFTPD	P35247	375 aa		9.43	□□□□□ -0.9
FXR1-222	ENST00000498658	CLK1	P49759	484 aa	Known RBP	9.43	□□□□□ -0.9
FXR1-222	ENST00000498658	RNF144A	P50876	292 aa	Predicted RBP	9.43	□□□□□ -0.9
FXR1-222	ENST00000498658	CTBP2	P56545	445 aa		9.43	□□□□□ -0.9
FXR1-222	ENST00000498658	SESN3	P58005	492 aa		9.43	□□□□□ -0.9
FXR1-222	ENST00000498658	MERTK	Q12866	999 aa		9.43	□□□□□ -0.9
FXR1-222	ENST00000498658	TOMM34	Q15785	309 aa	Predicted RBP	9.43	□□□□□ -0.9
FXR1-222	ENST00000498658	TMEM176B	Q3YBM2	270 aa	Predicted RBP	9.43	□□□□□ -0.9
FXR1-222	ENST00000498658	FAM214B	Q7L5A3	538 aa		9.43	□□□□□ -0.9
FXR1-222	ENST00000498658	ZNF550	Q7Z398	422 aa		9.43	□□□□□ -0.9
FXR1-222	ENST00000498658	LUZP2	Q86TE4	346 aa		9.43	□□□□□ -0.9
FXR1-222	ENST00000498658	SLC43A2	Q8N370	569 aa		9.43	□□□□□ -0.9
FXR1-222	ENST00000498658	OR52P1P	Q8NH57	321 aa		9.43	□□□□□ -0.9
FXR1-222	ENST00000498658	OSTF1	Q92882	214 aa		9.43	□□□□□ -0.9
FXR1-222	ENST00000498658	ZG16B	Q96DA0	208 aa		9.43	□□□□□ -0.9
FXR1-222	ENST00000498658	STARD4	Q96DR4	205 aa		9.43	□□□□□ -0.9
FXR1-222	ENST00000498658	AURKB	Q96GD4	344 aa	Predicted RBP	9.43	□□□□□ -0.9
FXR1-222	ENST00000498658	TACO1	Q9BSH4	297 aa	Known RBP	9.43	□□□□□ -0.9
FXR1-222	ENST00000498658	QRSL1	Q9H0R6	528 aa	Known RBP	9.43	□□□□□ -0.9
FXR1-222	ENST00000498658	CCDC134	Q9H6E4	229 aa		9.43	□□□□□ -0.9
FXR1-222	ENST00000498658	TMEM185B	Q9H7F4	350 aa		9.43	□□□□□ -0.9
FXR1-222	ENST00000498658	BCL2L10	Q9HD36	194 aa		9.43	□□□□□ -0.9
FXR1-222	ENST00000498658	A4GALT	Q9NPC4	353 aa		9.43	□□□□□ -0.9
FXR1-222	ENST00000498658	ELOVL5	Q9NYP7	299 aa		9.43	□□□□□ -0.9
FXR1-222	ENST00000498658	PROCR	Q9UNN8	238 aa		9.43	□□□□□ -0.9
FXR1-222	ENST00000498658	HEATR5A	Q86XA9	2040 aa		9.43	□□□□□ -0.9
FXR1-222	ENST00000498658	CENPVL1	A0A0U1RR11	272 aa		9.42	□□□□□ -0.9
FXR1-222	ENST00000498658	CDHR4	A6H8M9	788 aa		9.42	□□□□□ -0.9
FXR1-222	ENST00000498658	CFAP73	A6NFT4	308 aa		9.42	□□□□□ -0.9
FXR1-222	ENST00000498658	CXCL13	O43927	109 aa		9.42	□□□□□ -0.9
FXR1-222	ENST00000498658	SS18L1	O75177	396 aa	Predicted RBP	9.42	□□□□□ -0.9
FXR1-222	ENST00000498658	SMNDC1	O75940	238 aa	Known RBP eCLIP	9.42	□□□□□ -0.9
FXR1-222	ENST00000498658	AQP8	O94778	261 aa		9.42	□□□□□ -0.9
FXR1-222	ENST00000498658	ETS2	P15036	469 aa		9.42	□□□□□ -0.9

Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms