RNA–Protein interactions for RNA: ENST00000498495.1

HSPG2-213, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-213ENST00000498495 CGB2Q6NT52 195 aa11.49□□□□□ -0.57
HSPG2-213ENST00000498495 DLEU7Q6UYE1 221 aa11.49□□□□□ -0.57
HSPG2-213ENST00000498495 GDF7Q7Z4P5 450 aa11.49□□□□□ -0.57
HSPG2-213ENST00000498495 LUZP2Q86TE4 346 aa11.49□□□□□ -0.57
HSPG2-213ENST00000498495 GTF2IRD2Q86UP8 949 aa11.49□□□□□ -0.57
HSPG2-213ENST00000498495 VRK2Q86Y07 508 aa11.49□□□□□ -0.57
HSPG2-213ENST00000498495 MSRB3Q8IXL7 192 aa11.49□□□□□ -0.57
HSPG2-213ENST00000498495 MAL2Q969L2 176 aa11.49□□□□□ -0.57
HSPG2-213ENST00000498495 REXO5Q96IC2 774 aaKnown RBP11.49□□□□□ -0.57
HSPG2-213ENST00000498495 TREX2Q9BQ50 279 aaPredicted RBP11.49□□□□□ -0.57
HSPG2-213ENST00000498495 PIGMQ9H3S5 423 aa11.49□□□□□ -0.57
HSPG2-213ENST00000498495 ARMC7Q9H6L4 198 aa11.49□□□□□ -0.57
HSPG2-213ENST00000498495 RNF122Q9H9V4 155 aa11.49□□□□□ -0.57
HSPG2-213ENST00000498495 A4GALTQ9NPC4 353 aa11.49□□□□□ -0.57
HSPG2-213ENST00000498495 JKAMPQ9P055 326 aa11.49□□□□□ -0.57
HSPG2-213ENST00000498495 IFT52Q9Y366 437 aa11.49□□□□□ -0.57
HSPG2-213ENST00000498495 SPTAN1Q13813 2472 aaKnown RBP11.49□□□□□ -0.57
HSPG2-213ENST00000498495 HCFC1P51610 2035 aa11.48□□□□□ -0.57
HSPG2-213ENST00000498495 UTP20O75691 2785 aaKnown RBP11.48□□□□□ -0.57
HSPG2-213ENST00000498495 TRBV5-3A0A0A0MS03 114 aa11.48□□□□□ -0.57
HSPG2-213ENST00000498495 A0A1W2PNV4 684 aa11.48□□□□□ -0.57
HSPG2-213ENST00000498495 ETV2O00321 342 aaPredicted RBP11.48□□□□□ -0.57
HSPG2-213ENST00000498495 AQP8O94778 261 aa11.48□□□□□ -0.57
HSPG2-213ENST00000498495 PLGP00747 810 aaPredicted RBP11.48□□□□□ -0.57
HSPG2-213ENST00000498495 PABPC4LP0CB38 370 aaKnown RBP11.48□□□□□ -0.57
HSPG2-213ENST00000498495 PRF1P14222 555 aa11.48□□□□□ -0.57
HSPG2-213ENST00000498495 UQCRBP14927 111 aa11.48□□□□□ -0.57
HSPG2-213ENST00000498495 GPX2P18283 190 aa11.48□□□□□ -0.57
HSPG2-213ENST00000498495 SHC1P29353 583 aa11.48□□□□□ -0.57
HSPG2-213ENST00000498495 SLC7A1P30825 629 aa11.48□□□□□ -0.57
HSPG2-213ENST00000498495 CPA2P48052 419 aa11.48□□□□□ -0.57
HSPG2-213ENST00000498495 DLX5P56178 289 aa11.48□□□□□ -0.57
HSPG2-213ENST00000498495 SIRPAP78324 504 aa11.48□□□□□ -0.57
HSPG2-213ENST00000498495 SNTB1Q13884 538 aaKnown RBP11.48□□□□□ -0.57
HSPG2-213ENST00000498495 NFYCQ13952 458 aa11.48□□□□□ -0.57
HSPG2-213ENST00000498495 ZSWIM7Q19AV6 140 aa11.48□□□□□ -0.57
HSPG2-213ENST00000498495 FBXL19-AS1Q494R0 122 aa11.48□□□□□ -0.57
HSPG2-213ENST00000498495 LIN52Q52LA3 116 aa11.48□□□□□ -0.57
HSPG2-213ENST00000498495 RPS26P11Q5JNZ5 115 aaPredicted RBP11.48□□□□□ -0.57
HSPG2-213ENST00000498495 GCNT6Q5T4J0 391 aa11.48□□□□□ -0.57
HSPG2-213ENST00000498495 MRPL2Q5T653 305 aaKnown RBP11.48□□□□□ -0.57
HSPG2-213ENST00000498495 PRAMEF8Q5VWM4 474 aa11.48□□□□□ -0.57
HSPG2-213ENST00000498495 PRAMEF7Q5VXH5 474 aa11.48□□□□□ -0.57
HSPG2-213ENST00000498495 PLEKHM3Q6ZWE6 761 aa11.48□□□□□ -0.57
HSPG2-213ENST00000498495 GRINAQ7Z429 371 aa11.48□□□□□ -0.57
HSPG2-213ENST00000498495 KIF18BQ86Y91 864 aa11.48□□□□□ -0.57
HSPG2-213ENST00000498495 ZNF440Q8IYI8 595 aa11.48□□□□□ -0.57
HSPG2-213ENST00000498495 ZNF295-AS1Q8N0V1 137 aa11.48□□□□□ -0.57
HSPG2-213ENST00000498495 DPP10Q8N608 796 aa11.48□□□□□ -0.57
HSPG2-213ENST00000498495 BBS10Q8TAM1 723 aa11.48□□□□□ -0.57
HSPG2-213ENST00000498495 STARD4Q96DR4 205 aa11.48□□□□□ -0.57
HSPG2-213ENST00000498495 RBM24Q9BX46 236 aaKnown RBP11.48□□□□□ -0.57
HSPG2-213ENST00000498495 TRIM8Q9BZR9 551 aa11.48□□□□□ -0.57
HSPG2-213ENST00000498495 BCL2L10Q9HD36 194 aa11.48□□□□□ -0.57
HSPG2-213ENST00000498495 RLIMQ9NVW2 624 aa11.48□□□□□ -0.57
HSPG2-213ENST00000498495 DNAJB12Q9NXW2 375 aaKnown RBP11.48□□□□□ -0.57
HSPG2-213ENST00000498495 KLHL14Q9P2G3 628 aa11.48□□□□□ -0.57
HSPG2-213ENST00000498495 PACSIN3Q9UKS6 424 aa11.48□□□□□ -0.57
HSPG2-213ENST00000498495 GMEB1Q9Y692 573 aa11.48□□□□□ -0.57
HSPG2-213ENST00000498495 CACNA1CQ13936 2221 aa11.47□□□□□ -0.57
HSPG2-213ENST00000498495 DSPPQ9NZW4 1301 aa11.47□□□□□ -0.57
HSPG2-213ENST00000498495 CDHR4A6H8M9 788 aa11.47□□□□□ -0.57
HSPG2-213ENST00000498495 CFAP73A6NFT4 308 aa11.47□□□□□ -0.57
HSPG2-213ENST00000498495 A8MXE2 369 aa11.47□□□□□ -0.57
HSPG2-213ENST00000498495 MSTNO14793 375 aa11.47□□□□□ -0.57
HSPG2-213ENST00000498495 TNFSF13O75888 250 aa11.47□□□□□ -0.57
HSPG2-213ENST00000498495 SMNDC1O75940 238 aaKnown RBP eCLIP11.47□□□□□ -0.57
HSPG2-213ENST00000498495 PGM3O95394 542 aa11.47□□□□□ -0.57
HSPG2-213ENST00000498495 THBS1P07996 1170 aa11.47□□□□□ -0.57
HSPG2-213ENST00000498495 FKBP2P26885 142 aaKnown RBP11.47□□□□□ -0.57
HSPG2-213ENST00000498495 SSTR2P30874 369 aa11.47□□□□□ -0.57
HSPG2-213ENST00000498495 KIR2DL2P43627 348 aaPredicted RBP11.47□□□□□ -0.57
HSPG2-213ENST00000498495 KIR2DL3P43628 341 aa11.47□□□□□ -0.57
HSPG2-213ENST00000498495 HTR3AP46098 478 aa11.47□□□□□ -0.57
HSPG2-213ENST00000498495 CDK6Q00534 326 aa11.47□□□□□ -0.57
HSPG2-213ENST00000498495 KLF10Q13118 480 aa11.47□□□□□ -0.57
HSPG2-213ENST00000498495 MYBPHQ13203 477 aa11.47□□□□□ -0.57
HSPG2-213ENST00000498495 MMEL1Q495T6 779 aa11.47□□□□□ -0.57
HSPG2-213ENST00000498495 ZNF311Q5JNZ3 666 aa11.47□□□□□ -0.57
HSPG2-213ENST00000498495 C3orf33Q6P1S2 294 aa11.47□□□□□ -0.57
HSPG2-213ENST00000498495 ZNF836Q6ZNA1 936 aa11.47□□□□□ -0.57
HSPG2-213ENST00000498495 FAM214BQ7L5A3 538 aa11.47□□□□□ -0.57
HSPG2-213ENST00000498495 ZNF550Q7Z398 422 aa11.47□□□□□ -0.57
HSPG2-213ENST00000498495 BTLAQ7Z6A9 289 aa11.47□□□□□ -0.57
HSPG2-213ENST00000498495 DHDDSQ86SQ9 333 aa11.47□□□□□ -0.57
HSPG2-213ENST00000498495 RETREG3Q86VR2 466 aa11.47□□□□□ -0.57
HSPG2-213ENST00000498495 NFKBIDQ8NI38 313 aa11.47□□□□□ -0.57
HSPG2-213ENST00000498495 ROBO4Q8WZ75 1007 aa11.47□□□□□ -0.57
HSPG2-213ENST00000498495 CPNE4Q96A23 557 aaPredicted RBP11.47□□□□□ -0.57
HSPG2-213ENST00000498495 C14orf79Q96F83 325 aa11.47□□□□□ -0.57
HSPG2-213ENST00000498495 GMPPAQ96IJ6 420 aaPredicted RBP11.47□□□□□ -0.57
HSPG2-213ENST00000498495 ANKRD27Q96NW4 1050 aa11.47□□□□□ -0.57
HSPG2-213ENST00000498495 ZNF317Q96PQ6 595 aaPredicted RBP11.47□□□□□ -0.57
HSPG2-213ENST00000498495 OR5B2Q96R09 309 aa11.47□□□□□ -0.57
HSPG2-213ENST00000498495 CGREF1Q99674 301 aa11.47□□□□□ -0.57
HSPG2-213ENST00000498495 ZNF559Q9BR84 538 aa11.47□□□□□ -0.57
HSPG2-213ENST00000498495 CCDC106Q9BWC9 280 aa11.47□□□□□ -0.57
HSPG2-213ENST00000498495 SPATA9Q9BWV2 254 aa11.47□□□□□ -0.57
HSPG2-213ENST00000498495 SAR1AQ9NR31 198 aa11.47□□□□□ -0.57
HSPG2-213ENST00000498495 CTPS2Q9NRF8 586 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms