RNA–Protein interactions for RNA: ENST00000497722.2

PSPC1-205, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-205ENST00000497722 CELF6Q96J87 481 aaKnown RBP2.27□□□□□ -2.05
PSPC1-205ENST00000497722 C12orf66Q96MD2 445 aa2.27□□□□□ -2.05
PSPC1-205ENST00000497722 TESK2Q96S53 571 aa2.27□□□□□ -2.05
PSPC1-205ENST00000497722 RIT2Q99578 217 aa2.27□□□□□ -2.05
PSPC1-205ENST00000497722 MRPL13Q9BYD1 178 aaKnown RBP2.27□□□□□ -2.05
PSPC1-205ENST00000497722 MAGT1Q9H0U3 335 aa2.27□□□□□ -2.05
PSPC1-205ENST00000497722 OR51J1Q9H342 316 aa2.27□□□□□ -2.05
PSPC1-205ENST00000497722 APMAPQ9HDC9 416 aa2.27□□□□□ -2.05
PSPC1-205ENST00000497722 WARS2Q9UGM6 360 aaKnown RBP2.27□□□□□ -2.05
PSPC1-205ENST00000497722 LCMT1Q9UIC8 334 aa2.27□□□□□ -2.05
PSPC1-205ENST00000497722 LAMP5Q9UJQ1 280 aa2.27□□□□□ -2.05
PSPC1-205ENST00000497722 SNX6Q9UNH7 406 aa2.27□□□□□ -2.05
PSPC1-205ENST00000497722 COPS3Q9UNS2 423 aa2.27□□□□□ -2.05
PSPC1-205ENST00000497722 TRAF3IP3Q9Y228 551 aa2.27□□□□□ -2.05
PSPC1-205ENST00000497722 TDRD6O60522 2096 aaKnown RBP2.27□□□□□ -2.05
PSPC1-205ENST00000497722 CHD4Q14839 1912 aa2.27□□□□□ -2.05
PSPC1-205ENST00000497722 ARHGAP23Q9P227 1491 aa2.26□□□□□ -2.05
PSPC1-205ENST00000497722 G3V4G9 280 aa2.26□□□□□ -2.05
PSPC1-205ENST00000497722 K7N7A8 449 aa2.26□□□□□ -2.05
PSPC1-205ENST00000497722 OR1F1O43749 312 aa2.26□□□□□ -2.05
PSPC1-205ENST00000497722 EFNA2O43921 213 aa2.26□□□□□ -2.05
PSPC1-205ENST00000497722 SNAPINO95295 136 aa2.26□□□□□ -2.05
PSPC1-205ENST00000497722 CA1P00915 261 aaPredicted RBP2.26□□□□□ -2.05
PSPC1-205ENST00000497722 OPN1LWP04000 364 aa2.26□□□□□ -2.05
PSPC1-205ENST00000497722 KRT6BP04259 564 aa2.26□□□□□ -2.05
PSPC1-205ENST00000497722 UGT2B4P06133 528 aa2.26□□□□□ -2.05
PSPC1-205ENST00000497722 HEXBP07686 556 aa2.26□□□□□ -2.05
PSPC1-205ENST00000497722 GIPP09681 153 aaPredicted RBP2.26□□□□□ -2.05
PSPC1-205ENST00000497722 HSMCR30P0CW71 290 aa2.26□□□□□ -2.05
PSPC1-205ENST00000497722 PGCP20142 388 aa2.26□□□□□ -2.05
PSPC1-205ENST00000497722 ATP6V1B2P21281 511 aa2.26□□□□□ -2.05
PSPC1-205ENST00000497722 COX7A1P24310 79 aa2.26□□□□□ -2.05
PSPC1-205ENST00000497722 AQP1P29972 269 aa2.26□□□□□ -2.05
PSPC1-205ENST00000497722 ADSSP30520 456 aa2.26□□□□□ -2.05
PSPC1-205ENST00000497722 FGF9P31371 208 aaPredicted RBP2.26□□□□□ -2.05
PSPC1-205ENST00000497722 MDH1P40925 334 aaKnown RBP2.26□□□□□ -2.05
PSPC1-205ENST00000497722 BTDP43251 543 aa2.26□□□□□ -2.05
PSPC1-205ENST00000497722 KRT6CP48668 564 aa2.26□□□□□ -2.05
PSPC1-205ENST00000497722 SELENOTP62341 195 aa2.26□□□□□ -2.05
PSPC1-205ENST00000497722 MXD4Q14582 209 aaPredicted RBP2.26□□□□□ -2.05
PSPC1-205ENST00000497722 SLC5A12Q1EHB4 618 aa2.26□□□□□ -2.05
PSPC1-205ENST00000497722 SLC36A3Q495N2 470 aa2.26□□□□□ -2.05
PSPC1-205ENST00000497722 TMEM52BQ4KMG9 183 aa2.26□□□□□ -2.05
PSPC1-205ENST00000497722 RABGAP1LQ5R372 815 aa2.26□□□□□ -2.05
PSPC1-205ENST00000497722 RIPPLY2Q5TAB7 128 aa2.26□□□□□ -2.05
PSPC1-205ENST00000497722 NCR3LG1Q68D85 454 aa2.26□□□□□ -2.05
PSPC1-205ENST00000497722 FAM199XQ6PEV8 388 aaPredicted RBP2.26□□□□□ -2.05
PSPC1-205ENST00000497722 RNF165Q6ZSG1 346 aa2.26□□□□□ -2.05
PSPC1-205ENST00000497722 ZNF571Q7Z3V5 609 aaPredicted RBP2.26□□□□□ -2.05
PSPC1-205ENST00000497722 FAM220AQ7Z4H9 259 aa2.26□□□□□ -2.05
PSPC1-205ENST00000497722 CLDN19Q8N6F1 224 aa2.26□□□□□ -2.05
PSPC1-205ENST00000497722 OR10A7Q8NGE5 316 aa2.26□□□□□ -2.05
PSPC1-205ENST00000497722 OR52I1Q8NGK6 324 aa2.26□□□□□ -2.05
PSPC1-205ENST00000497722 NANPQ8TBE9 248 aa2.26□□□□□ -2.05
PSPC1-205ENST00000497722 RAET1EQ8TD07 263 aa2.26□□□□□ -2.05
PSPC1-205ENST00000497722 SPRYD4Q8WW59 207 aaPredicted RBP2.26□□□□□ -2.05
PSPC1-205ENST00000497722 OR1E3Q8WZA6 343 aa2.26□□□□□ -2.05
PSPC1-205ENST00000497722 MRPS31Q92665 395 aaKnown RBP2.26□□□□□ -2.05
PSPC1-205ENST00000497722 UCN3Q969E3 161 aa2.26□□□□□ -2.05
PSPC1-205ENST00000497722 SH3YL1Q96HL8 342 aaPredicted RBP2.26□□□□□ -2.05
PSPC1-205ENST00000497722 C4orf36Q96KX1 117 aa2.26□□□□□ -2.05
PSPC1-205ENST00000497722 SRXN1Q9BYN0 137 aa2.26□□□□□ -2.05
PSPC1-205ENST00000497722 POLR1EQ9GZS1 481 aaKnown RBP2.26□□□□□ -2.05
PSPC1-205ENST00000497722 TMEM117Q9H0C3 514 aa2.26□□□□□ -2.05
PSPC1-205ENST00000497722 ZDHHC11Q9H8X9 412 aa2.26□□□□□ -2.05
PSPC1-205ENST00000497722 SH2D2AQ9NP31 389 aa2.26□□□□□ -2.05
PSPC1-205ENST00000497722 AATFQ9NY61 560 aaKnown RBP eCLIP2.26□□□□□ -2.05
PSPC1-205ENST00000497722 PRPF19Q9UMS4 504 aaKnown RBP2.26□□□□□ -2.05
PSPC1-205ENST00000497722 GSTK1Q9Y2Q3 226 aa2.26□□□□□ -2.05
PSPC1-205ENST00000497722 PLEKHG1Q9ULL1 1385 aa2.25□□□□□ -2.05
PSPC1-205ENST00000497722 FRMPD4Q14CM0 1322 aa2.25□□□□□ -2.05
PSPC1-205ENST00000497722 IGHV2-70DA0A0C4DH43 119 aa2.25□□□□□ -2.05
PSPC1-205ENST00000497722 PP2D1A8MPX8 630 aa2.25□□□□□ -2.05
PSPC1-205ENST00000497722 PPIAL4DF5H284 164 aa2.25□□□□□ -2.05
PSPC1-205ENST00000497722 CTAGE5O15320 804 aa2.25□□□□□ -2.05
PSPC1-205ENST00000497722 POLR2DO15514 142 aaKnown RBP2.25□□□□□ -2.05
PSPC1-205ENST00000497722 PRKYO43930 277 aa2.25□□□□□ -2.05
PSPC1-205ENST00000497722 PEX11AO75192 247 aa2.25□□□□□ -2.05
PSPC1-205ENST00000497722 BCAS1O75363 584 aaPredicted RBP2.25□□□□□ -2.05
PSPC1-205ENST00000497722 ECI2O75521 394 aa2.25□□□□□ -2.05
PSPC1-205ENST00000497722 B3GAT3O94766 335 aa2.25□□□□□ -2.05
PSPC1-205ENST00000497722 UFL1O94874 794 aa2.25□□□□□ -2.05
PSPC1-205ENST00000497722 H2BFMP0C1H6 154 aa2.25□□□□□ -2.05
PSPC1-205ENST00000497722 TBXA2RP21731 343 aa2.25□□□□□ -2.05
PSPC1-205ENST00000497722 PSMA5P28066 241 aa2.25□□□□□ -2.05
PSPC1-205ENST00000497722 HTR1FP30939 366 aa2.25□□□□□ -2.05
PSPC1-205ENST00000497722 CHI3L1P36222 383 aaPredicted RBP2.25□□□□□ -2.05
PSPC1-205ENST00000497722 LEPP41159 167 aa2.25□□□□□ -2.05
PSPC1-205ENST00000497722 PRKXP51817 358 aa2.25□□□□□ -2.05
PSPC1-205ENST00000497722 APOC4P55056 127 aa2.25□□□□□ -2.05
PSPC1-205ENST00000497722 RIPPLY3P57055 190 aa2.25□□□□□ -2.05
PSPC1-205ENST00000497722 MESDQ14696 234 aa2.25□□□□□ -2.05
PSPC1-205ENST00000497722 ZNF658BQ4V348 819 aaPredicted RBP2.25□□□□□ -2.05
PSPC1-205ENST00000497722 DNAJC21Q5F1R6 531 aaKnown RBP2.25□□□□□ -2.05
PSPC1-205ENST00000497722 SAMD4BQ5PRF9 694 aaKnown RBP2.25□□□□□ -2.05
PSPC1-205ENST00000497722 MOB3BQ86TA1 216 aa2.25□□□□□ -2.05
PSPC1-205ENST00000497722 KIR3DL3Q8N743 410 aa2.25□□□□□ -2.05
PSPC1-205ENST00000497722 OR5L2Q8NGL0 311 aa2.25□□□□□ -2.05
PSPC1-205ENST00000497722 FANK1Q8TC84 345 aa2.25□□□□□ -2.05
PSPC1-205ENST00000497722 PIGCQ92535 297 aa2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms