RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 SPANXN4Q5MJ08 99 aa5.29□□□□□ -1.56
BRCA1-224ENST00000497488 SPECC1LQ69YQ0 1117 aa5.29□□□□□ -1.56
BRCA1-224ENST00000497488 H3F3CQ6NXT2 135 aa5.29□□□□□ -1.56
BRCA1-224ENST00000497488 CCDC137Q6PK04 289 aaKnown RBP5.29□□□□□ -1.56
BRCA1-224ENST00000497488 C19orf35Q6ZS72 473 aa5.29□□□□□ -1.56
BRCA1-224ENST00000497488 DND1Q8IYX4 353 aaKnown RBP5.29□□□□□ -1.56
BRCA1-224ENST00000497488 TMEM199Q8N511 208 aa5.29□□□□□ -1.56
BRCA1-224ENST00000497488 FAM110BQ8TC76 370 aa5.29□□□□□ -1.56
BRCA1-224ENST00000497488 MAIP1Q8WWC4 291 aa5.29□□□□□ -1.56
BRCA1-224ENST00000497488 CACNG8Q8WXS5 425 aa5.29□□□□□ -1.56
BRCA1-224ENST00000497488 CCDC94Q9BW85 323 aaPredicted RBP5.29□□□□□ -1.56
BRCA1-224ENST00000497488 PRRG3Q9BZD7 231 aa5.29□□□□□ -1.56
BRCA1-224ENST00000497488 MFFQ9GZY8 342 aa5.29□□□□□ -1.56
BRCA1-224ENST00000497488 RANBP3Q9H6Z4 567 aaPredicted RBP5.29□□□□□ -1.56
BRCA1-224ENST00000497488 MYOZ2Q9NPC6 264 aa5.29□□□□□ -1.56
BRCA1-224ENST00000497488 UBE2TQ9NPD8 197 aaPredicted RBP5.29□□□□□ -1.56
BRCA1-224ENST00000497488 PHF11Q9UIL8 331 aa5.29□□□□□ -1.56
BRCA1-224ENST00000497488 ATP6V1DQ9Y5K8 247 aa5.29□□□□□ -1.56
BRCA1-224ENST00000497488 OVOS2A0A0G2JMS6 1433 aa5.29□□□□□ -1.56
BRCA1-224ENST00000497488 FLT4P35916 1363 aa5.29□□□□□ -1.56
BRCA1-224ENST00000497488 RGPD1P0DJD0 1748 aa5.28□□□□□ -1.56
BRCA1-224ENST00000497488 RPS10-NUDT3A0A1W2PQS6 291 aa5.28□□□□□ -1.56
BRCA1-224ENST00000497488 PLSCR5A0PG75 271 aa5.28□□□□□ -1.56
BRCA1-224ENST00000497488 A8MXQ7 604 aa5.28□□□□□ -1.56
BRCA1-224ENST00000497488 INAFM1C9JVW0 142 aa5.28□□□□□ -1.56
BRCA1-224ENST00000497488 ATP6V0E1O15342 81 aa5.28□□□□□ -1.56
BRCA1-224ENST00000497488 CTSVO60911 334 aa5.28□□□□□ -1.56
BRCA1-224ENST00000497488 TMEM50AO95807 157 aa5.28□□□□□ -1.56
BRCA1-224ENST00000497488 ANGPTL1O95841 491 aa5.28□□□□□ -1.56
BRCA1-224ENST00000497488 SERPIND1P05546 499 aa5.28□□□□□ -1.56
BRCA1-224ENST00000497488 CT62P0C5K7 136 aa5.28□□□□□ -1.56
BRCA1-224ENST00000497488 ZNF24P17028 368 aa5.28□□□□□ -1.56
BRCA1-224ENST00000497488 ARRB1P49407 418 aaPredicted RBP5.28□□□□□ -1.56
BRCA1-224ENST00000497488 LBX1P52954 281 aa5.28□□□□□ -1.56
BRCA1-224ENST00000497488 HERV-K104P61576 105 aa5.28□□□□□ -1.56
BRCA1-224ENST00000497488 IL9RQ01113 521 aa5.28□□□□□ -1.56
BRCA1-224ENST00000497488 FASTKD3Q14CZ7 662 aaKnown RBP5.28□□□□□ -1.56
BRCA1-224ENST00000497488 UBE2V2Q15819 145 aa5.28□□□□□ -1.56
BRCA1-224ENST00000497488 EZH2Q15910 746 aaKnown RBP5.28□□□□□ -1.56
BRCA1-224ENST00000497488 SLC25A52Q3SY17 297 aa5.28□□□□□ -1.56
BRCA1-224ENST00000497488 RFTN2Q52LD8 501 aaPredicted RBP5.28□□□□□ -1.56
BRCA1-224ENST00000497488 ATP1A1-AS1Q5TC04 95 aa5.28□□□□□ -1.56
BRCA1-224ENST00000497488 OR52W1Q6IF63 320 aa5.28□□□□□ -1.56
BRCA1-224ENST00000497488 ENPP6Q6UWR7 440 aa5.28□□□□□ -1.56
BRCA1-224ENST00000497488 CYS1Q717R9 158 aa5.28□□□□□ -1.56
BRCA1-224ENST00000497488 UTS2BQ765I0 119 aa5.28□□□□□ -1.56
BRCA1-224ENST00000497488 ERI1Q8IV48 349 aaKnown RBP5.28□□□□□ -1.56
BRCA1-224ENST00000497488 MMAAQ8IVH4 418 aaKnown RBP5.28□□□□□ -1.56
BRCA1-224ENST00000497488 DHRSXQ8N5I4 330 aa5.28□□□□□ -1.56
BRCA1-224ENST00000497488 KBTBD3Q8NAB2 608 aa5.28□□□□□ -1.56
BRCA1-224ENST00000497488 TMEM104Q8NE00 496 aa5.28□□□□□ -1.56
BRCA1-224ENST00000497488 OR51L1Q8NGJ5 315 aa5.28□□□□□ -1.56
BRCA1-224ENST00000497488 OR5L2Q8NGL0 311 aa5.28□□□□□ -1.56
BRCA1-224ENST00000497488 MPLKIPQ8TAP9 179 aa5.28□□□□□ -1.56
BRCA1-224ENST00000497488 CNIH3Q8TBE1 160 aa5.28□□□□□ -1.56
BRCA1-224ENST00000497488 MAGEE2Q8TD90 523 aaPredicted RBP5.28□□□□□ -1.56
BRCA1-224ENST00000497488 C8orf44Q96CB5 159 aa5.28□□□□□ -1.56
BRCA1-224ENST00000497488 NUS1Q96E22 293 aa5.28□□□□□ -1.56
BRCA1-224ENST00000497488 TMEM121Q9BTD3 319 aa5.28□□□□□ -1.56
BRCA1-224ENST00000497488 TM6SF2Q9BZW4 377 aa5.28□□□□□ -1.56
BRCA1-224ENST00000497488 R3HDMLQ9H3Y0 253 aa5.28□□□□□ -1.56
BRCA1-224ENST00000497488 NMRAL1Q9HBL8 299 aa5.28□□□□□ -1.56
BRCA1-224ENST00000497488 INPP5EQ9NRR6 644 aa5.28□□□□□ -1.56
BRCA1-224ENST00000497488 ZDHHC18Q9NUE0 388 aa5.28□□□□□ -1.56
BRCA1-224ENST00000497488 ADAM22Q9P0K1 906 aa5.28□□□□□ -1.56
BRCA1-224ENST00000497488 RALYQ9UKM9 306 aaKnown RBP5.28□□□□□ -1.56
BRCA1-224ENST00000497488 RBMX2Q9Y388 322 aaKnown RBP5.28□□□□□ -1.56
BRCA1-224ENST00000497488 PTGDR2Q9Y5Y4 395 aa5.28□□□□□ -1.56
BRCA1-224ENST00000497488 ALG6Q9Y672 507 aa5.28□□□□□ -1.56
BRCA1-224ENST00000497488 SHANK3Q9BYB0 1731 aa5.28□□□□□ -1.56
BRCA1-224ENST00000497488 ARID2Q68CP9 1835 aa5.27□□□□□ -1.57
BRCA1-224ENST00000497488 GAKO14976 1311 aa5.27□□□□□ -1.57
BRCA1-224ENST00000497488 CNTNAP2Q9UHC6 1331 aa5.27□□□□□ -1.57
BRCA1-224ENST00000497488 IGLV5-52A0A0A0MRZ9 124 aa5.27□□□□□ -1.57
BRCA1-224ENST00000497488 F5H6K3 240 aa5.27□□□□□ -1.57
BRCA1-224ENST00000497488 EI24O14681 340 aa5.27□□□□□ -1.57
BRCA1-224ENST00000497488 SIGLEC5O15389 551 aa5.27□□□□□ -1.57
BRCA1-224ENST00000497488 SYNGR3O43761 229 aa5.27□□□□□ -1.57
BRCA1-224ENST00000497488 KLHL2O95198 593 aa5.27□□□□□ -1.57
BRCA1-224ENST00000497488 PRKAR1AP10644 381 aa5.27□□□□□ -1.57
BRCA1-224ENST00000497488 ZNF43P17038 809 aa5.27□□□□□ -1.57
BRCA1-224ENST00000497488 HMGB2P26583 209 aaKnown RBP5.27□□□□□ -1.57
BRCA1-224ENST00000497488 SLC26A2P50443 739 aa5.27□□□□□ -1.57
BRCA1-224ENST00000497488 ARHGDIAP52565 204 aa5.27□□□□□ -1.57
BRCA1-224ENST00000497488 CLDN18P56856 261 aa5.27□□□□□ -1.57
BRCA1-224ENST00000497488 KLRC3Q07444 240 aa5.27□□□□□ -1.57
BRCA1-224ENST00000497488 NCF4Q15080 339 aa5.27□□□□□ -1.57
BRCA1-224ENST00000497488 KLHL38Q2WGJ6 581 aa5.27□□□□□ -1.57
BRCA1-224ENST00000497488 VPS26BQ4G0F5 336 aa5.27□□□□□ -1.57
BRCA1-224ENST00000497488 FAM106AQ4KMX7 169 aa5.27□□□□□ -1.57
BRCA1-224ENST00000497488 MANEAQ5SRI9 462 aa5.27□□□□□ -1.57
BRCA1-224ENST00000497488 C6orf183Q5T699 404 aa5.27□□□□□ -1.57
BRCA1-224ENST00000497488 LGSNQ5TDP6 509 aa5.27□□□□□ -1.57
BRCA1-224ENST00000497488 SCYL2Q6P3W7 929 aa5.27□□□□□ -1.57
BRCA1-224ENST00000497488 RHBDF2Q6PJF5 856 aa5.27□□□□□ -1.57
BRCA1-224ENST00000497488 SASS6Q6UVJ0 657 aa5.27□□□□□ -1.57
BRCA1-224ENST00000497488 ATRAIDQ6UW56 229 aa5.27□□□□□ -1.57
BRCA1-224ENST00000497488 TRMT10CQ7L0Y3 403 aaKnown RBP5.27□□□□□ -1.57
BRCA1-224ENST00000497488 SMG6Q86US8 1419 aaKnown RBP5.27□□□□□ -1.57
BRCA1-224ENST00000497488 PELI3Q8N2H9 469 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms