RNA–Protein interactions for RNA: ENST00000497415.1

RPN1-208, Transcript of ribophorin I, humanhuman

TSL 4

Gene RPN1, Length 547 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPN1-208ENST00000497415 POLQO75417 2590 aa16.73■□□□□ 0.27
RPN1-208ENST00000497415 DSPPQ9NZW4 1301 aa16.72■□□□□ 0.27
RPN1-208ENST00000497415 A0A096LPI6 279 aa16.72■□□□□ 0.27
RPN1-208ENST00000497415 CLDN24A6NM45 220 aa16.72■□□□□ 0.27
RPN1-208ENST00000497415 SS18L1O75177 396 aaPredicted RBP16.72■□□□□ 0.27
RPN1-208ENST00000497415 SMNDC1O75940 238 aaKnown RBP eCLIP16.72■□□□□ 0.27
RPN1-208ENST00000497415 TFPTP0C1Z6 253 aa16.72■□□□□ 0.27
RPN1-208ENST00000497415 EPXP11678 715 aa16.72■□□□□ 0.27
RPN1-208ENST00000497415 CRATP43155 626 aa16.72■□□□□ 0.27
RPN1-208ENST00000497415 DSTNP60981 165 aa16.72■□□□□ 0.27
RPN1-208ENST00000497415 ZNF239Q16600 458 aaKnown RBP16.72■□□□□ 0.27
RPN1-208ENST00000497415 LRIF1Q5T3J3 769 aa16.72■□□□□ 0.27
RPN1-208ENST00000497415 LINC01560Q8TB33 94 aa16.72■□□□□ 0.27
RPN1-208ENST00000497415 CPNE4Q96A23 557 aaPredicted RBP16.72■□□□□ 0.27
RPN1-208ENST00000497415 SPDL1Q96EA4 605 aa16.72■□□□□ 0.27
RPN1-208ENST00000497415 SRXN1Q9BYN0 137 aa16.72■□□□□ 0.27
RPN1-208ENST00000497415 TIGARQ9NQ88 270 aa16.72■□□□□ 0.27
RPN1-208ENST00000497415 THUMPD1Q9NXG2 353 aaKnown RBP16.72■□□□□ 0.27
RPN1-208ENST00000497415 CCDC167Q9P0B6 97 aa16.72■□□□□ 0.27
RPN1-208ENST00000497415 P2RX2Q9UBL9 471 aa16.72■□□□□ 0.27
RPN1-208ENST00000497415 MYO9AB2RTY4 2548 aa16.71■□□□□ 0.27
RPN1-208ENST00000497415 CLIC1O00299 241 aa16.71■□□□□ 0.27
RPN1-208ENST00000497415 ADAM11O75078 769 aa16.71■□□□□ 0.27
RPN1-208ENST00000497415 SQLEQ14534 574 aa16.71■□□□□ 0.27
RPN1-208ENST00000497415 PPP4R4Q6NUP7 873 aa16.71■□□□□ 0.27
RPN1-208ENST00000497415 C3orf33Q6P1S2 294 aa16.71■□□□□ 0.27
RPN1-208ENST00000497415 PLEKHM3Q6ZWE6 761 aa16.71■□□□□ 0.27
RPN1-208ENST00000497415 TMEM200AQ86VY9 491 aa16.71■□□□□ 0.27
RPN1-208ENST00000497415 ARFGAP2Q8N6H7 521 aa16.71■□□□□ 0.27
RPN1-208ENST00000497415 ATP6V1C2Q8NEY4 427 aa16.71■□□□□ 0.27
RPN1-208ENST00000497415 SLC38A5Q8WUX1 472 aa16.71■□□□□ 0.27
RPN1-208ENST00000497415 WDR60Q8WVS4 1066 aa16.71■□□□□ 0.27
RPN1-208ENST00000497415 CNOT9Q92600 299 aaKnown RBP16.71■□□□□ 0.27
RPN1-208ENST00000497415 OPN3Q9H1Y3 402 aaPredicted RBP16.71■□□□□ 0.27
RPN1-208ENST00000497415 PLSCR4Q9NRQ2 329 aa16.71■□□□□ 0.27
RPN1-208ENST00000497415 DNAJB12Q9NXW2 375 aaKnown RBP16.71■□□□□ 0.27
RPN1-208ENST00000497415 ELOVL5Q9NYP7 299 aa16.71■□□□□ 0.27
RPN1-208ENST00000497415 CALML5Q9NZT1 146 aa16.71■□□□□ 0.27
RPN1-208ENST00000497415 PROCRQ9UNN8 238 aa16.71■□□□□ 0.27
RPN1-208ENST00000497415 EMC9Q9Y3B6 208 aa16.71■□□□□ 0.27
RPN1-208ENST00000497415 GMEB1Q9Y692 573 aa16.71■□□□□ 0.27
RPN1-208ENST00000497415 A6NNC1 897 aa16.7■□□□□ 0.26
RPN1-208ENST00000497415 NR5A2O00482 541 aa16.7■□□□□ 0.26
RPN1-208ENST00000497415 DBIP07108 87 aaKnown RBP16.7■□□□□ 0.26
RPN1-208ENST00000497415 PABPC4LP0CB38 370 aaKnown RBP16.7■□□□□ 0.26
RPN1-208ENST00000497415 BMP2P12643 396 aa16.7■□□□□ 0.26
RPN1-208ENST00000497415 IL7RP16871 459 aa16.7■□□□□ 0.26
RPN1-208ENST00000497415 CD79BP40259 229 aa16.7■□□□□ 0.26
RPN1-208ENST00000497415 APOBEC1P41238 236 aaKnown RBP16.7■□□□□ 0.26
RPN1-208ENST00000497415 CRISP3P54108 245 aa16.7■□□□□ 0.26
RPN1-208ENST00000497415 RAC3P60763 192 aa16.7■□□□□ 0.26
RPN1-208ENST00000497415 FAM27E3Q08E93 113 aa16.7■□□□□ 0.26
RPN1-208ENST00000497415 MERTKQ12866 999 aa16.7■□□□□ 0.26
RPN1-208ENST00000497415 FADDQ13158 208 aa16.7■□□□□ 0.26
RPN1-208ENST00000497415 RGNQ15493 299 aa16.7■□□□□ 0.26
RPN1-208ENST00000497415 PAGE3Q5JUK9 113 aa16.7■□□□□ 0.26
RPN1-208ENST00000497415 GTF2IRD2BQ6EKJ0 949 aa16.7■□□□□ 0.26
RPN1-208ENST00000497415 GTF2IRD2Q86UP8 949 aa16.7■□□□□ 0.26
RPN1-208ENST00000497415 MSRB3Q8IXL7 192 aa16.7■□□□□ 0.26
RPN1-208ENST00000497415 ZNF610Q8N9Z0 462 aa16.7■□□□□ 0.26
RPN1-208ENST00000497415 OR6K3Q8NGY3 331 aa16.7■□□□□ 0.26
RPN1-208ENST00000497415 RNF128Q8TEB7 428 aa16.7■□□□□ 0.26
RPN1-208ENST00000497415 ROBO4Q8WZ75 1007 aa16.7■□□□□ 0.26
RPN1-208ENST00000497415 THOC1Q96FV9 657 aaKnown RBP16.7■□□□□ 0.26
RPN1-208ENST00000497415 DACH2Q96NX9 599 aa16.7■□□□□ 0.26
RPN1-208ENST00000497415 SIKE1Q9BRV8 207 aa16.7■□□□□ 0.26
RPN1-208ENST00000497415 CCDC106Q9BWC9 280 aa16.7■□□□□ 0.26
RPN1-208ENST00000497415 RAD21L1Q9H4I0 556 aa16.7■□□□□ 0.26
RPN1-208ENST00000497415 RABEP2Q9H5N1 569 aa16.7■□□□□ 0.26
RPN1-208ENST00000497415 ZNF385DQ9H6B1 395 aa16.7■□□□□ 0.26
RPN1-208ENST00000497415 SERINC1Q9NRX5 453 aa16.7■□□□□ 0.26
RPN1-208ENST00000497415 RASSF1Q9NS23 344 aa16.7■□□□□ 0.26
RPN1-208ENST00000497415 SLC25A37Q9NYZ2 338 aa16.7■□□□□ 0.26
RPN1-208ENST00000497415 CLEC4AQ9UMR7 237 aa16.7■□□□□ 0.26
RPN1-208ENST00000497415 CSMD2Q7Z408 3487 aa16.69■□□□□ 0.26
RPN1-208ENST00000497415 ENO4A6NNW6 628 aa16.69■□□□□ 0.26
RPN1-208ENST00000497415 FAAHO00519 579 aa16.69■□□□□ 0.26
RPN1-208ENST00000497415 PLGP00747 810 aaPredicted RBP16.69■□□□□ 0.26
RPN1-208ENST00000497415 BCHEP06276 602 aa16.69■□□□□ 0.26
RPN1-208ENST00000497415 CD1EP15812 388 aa16.69■□□□□ 0.26
RPN1-208ENST00000497415 RYKP34925 604 aa16.69■□□□□ 0.26
RPN1-208ENST00000497415 CPOXP36551 454 aa16.69■□□□□ 0.26
RPN1-208ENST00000497415 CTBP2P56545 445 aa16.69■□□□□ 0.26
RPN1-208ENST00000497415 GNA13Q14344 377 aa16.69■□□□□ 0.26
RPN1-208ENST00000497415 AGKQ53H12 422 aa16.69■□□□□ 0.26
RPN1-208ENST00000497415 MRPL2Q5T653 305 aaKnown RBP16.69■□□□□ 0.26
RPN1-208ENST00000497415 GRINAQ7Z429 371 aa16.69■□□□□ 0.26
RPN1-208ENST00000497415 LURAP1LQ8IV03 231 aa16.69■□□□□ 0.26
RPN1-208ENST00000497415 PEX5LQ8IYB4 626 aa16.69■□□□□ 0.26
RPN1-208ENST00000497415 ZNF563Q8TA94 476 aa16.69■□□□□ 0.26
RPN1-208ENST00000497415 GPATCH1Q9BRR8 931 aaKnown RBP16.69■□□□□ 0.26
RPN1-208ENST00000497415 SLAMF8Q9P0V8 285 aa16.69■□□□□ 0.26
RPN1-208ENST00000497415 PRDM4Q9UKN5 801 aa16.69■□□□□ 0.26
RPN1-208ENST00000497415 ANKRD17O75179 2603 aaKnown RBP16.69■□□□□ 0.26
RPN1-208ENST00000497415 SPG11Q96JI7 2443 aa16.68■□□□□ 0.26
RPN1-208ENST00000497415 TRBV5-3A0A0A0MS03 114 aa16.68■□□□□ 0.26
RPN1-208ENST00000497415 A0A0G2JPF8 293 aa16.68■□□□□ 0.26
RPN1-208ENST00000497415 A0A1W2PNR3 127 aa16.68■□□□□ 0.26
RPN1-208ENST00000497415 A0A1W2PP18 115 aa16.68■□□□□ 0.26
RPN1-208ENST00000497415 HNRNPCL2B2RXH8 293 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms