RNA–Protein interactions for RNA: ENST00000496549.5

CRNKL1-205, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,093 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-205ENST00000496549 VAMP2P63027 116 aa7.66□□□□□ -1.18
CRNKL1-205ENST00000496549 CYCSP99999 105 aaKnown RBP7.66□□□□□ -1.18
CRNKL1-205ENST00000496549 MAP4K2Q12851 820 aa7.66□□□□□ -1.18
CRNKL1-205ENST00000496549 UBE2NLQ5JXB2 153 aa7.66□□□□□ -1.18
CRNKL1-205ENST00000496549 ELFN2Q5R3F8 820 aa7.66□□□□□ -1.18
CRNKL1-205ENST00000496549 LIPJQ5W064 366 aa7.66□□□□□ -1.18
CRNKL1-205ENST00000496549 OR2A2Q6IF42 318 aa7.66□□□□□ -1.18
CRNKL1-205ENST00000496549 BAP18Q8IXM2 172 aa7.66□□□□□ -1.18
CRNKL1-205ENST00000496549 MRPL41Q8IXM3 137 aaKnown RBP7.66□□□□□ -1.18
CRNKL1-205ENST00000496549 GJD3Q8N144 294 aa7.66□□□□□ -1.18
CRNKL1-205ENST00000496549 THEM5Q8N1Q8 247 aa7.66□□□□□ -1.18
CRNKL1-205ENST00000496549 PGBD5Q8N414 524 aa7.66□□□□□ -1.18
CRNKL1-205ENST00000496549 FRMD1Q8N878 549 aa7.66□□□□□ -1.18
CRNKL1-205ENST00000496549 FOXRED1Q96CU9 486 aaPredicted RBP7.66□□□□□ -1.18
CRNKL1-205ENST00000496549 MASTLQ96GX5 879 aa7.66□□□□□ -1.18
CRNKL1-205ENST00000496549 CDT1Q9H211 546 aa7.66□□□□□ -1.18
CRNKL1-205ENST00000496549 SEBOXQ9HB31 216 aaPredicted RBP7.66□□□□□ -1.18
CRNKL1-205ENST00000496549 PXMP2Q9NR77 195 aa7.66□□□□□ -1.18
CRNKL1-205ENST00000496549 TDP1Q9NUW8 608 aa7.66□□□□□ -1.18
CRNKL1-205ENST00000496549 SH2B3Q9UQQ2 575 aa7.66□□□□□ -1.18
CRNKL1-205ENST00000496549 CHST2Q9Y4C5 530 aa7.66□□□□□ -1.18
CRNKL1-205ENST00000496549 NPTNQ9Y639 398 aa7.66□□□□□ -1.18
CRNKL1-205ENST00000496549 A0A1W2PPQ1 181 aa7.66□□□□□ -1.18
CRNKL1-205ENST00000496549 LNP1A1A4G5 178 aa7.66□□□□□ -1.18
CRNKL1-205ENST00000496549 LOC730098B7Z3J9 87 aa7.66□□□□□ -1.18
CRNKL1-205ENST00000496549 J3QLW9 94 aa7.66□□□□□ -1.18
CRNKL1-205ENST00000496549 RPN2P04844 631 aa7.66□□□□□ -1.18
CRNKL1-205ENST00000496549 GIMD1P0DJR0 217 aa7.66□□□□□ -1.18
CRNKL1-205ENST00000496549 MTHFD2P13995 350 aa7.66□□□□□ -1.18
CRNKL1-205ENST00000496549 ZNF19P17023 458 aa7.66□□□□□ -1.18
CRNKL1-205ENST00000496549 PNPLA4P41247 253 aa7.66□□□□□ -1.18
CRNKL1-205ENST00000496549 DHPSP49366 369 aaPredicted RBP7.66□□□□□ -1.18
CRNKL1-205ENST00000496549 TAS2R41P59536 307 aa7.66□□□□□ -1.18
CRNKL1-205ENST00000496549 ZNF280AP59817 542 aaPredicted RBP7.66□□□□□ -1.18
CRNKL1-205ENST00000496549 ATPAF1Q5TC12 328 aaPredicted RBP7.66□□□□□ -1.18
CRNKL1-205ENST00000496549 RNF219Q5W0B1 726 aaPredicted RBP7.66□□□□□ -1.18
CRNKL1-205ENST00000496549 ARHGAP11AQ6P4F7 1023 aa7.66□□□□□ -1.18
CRNKL1-205ENST00000496549 HHIPL2Q6UWX4 724 aa7.66□□□□□ -1.18
CRNKL1-205ENST00000496549 MOB3CQ70IA8 216 aa7.66□□□□□ -1.18
CRNKL1-205ENST00000496549 KCTD9Q7L273 389 aa7.66□□□□□ -1.18
CRNKL1-205ENST00000496549 PRSS45Q7RTY3 260 aa7.66□□□□□ -1.18
CRNKL1-205ENST00000496549 ADCK2Q7Z695 626 aa7.66□□□□□ -1.18
CRNKL1-205ENST00000496549 TMPRSS11BQ86T26 416 aa7.66□□□□□ -1.18
CRNKL1-205ENST00000496549 PIGXQ8TBF5 258 aa7.66□□□□□ -1.18
CRNKL1-205ENST00000496549 TMED6Q8WW62 240 aa7.66□□□□□ -1.18
CRNKL1-205ENST00000496549 RAB39BQ96DA2 213 aa7.66□□□□□ -1.18
CRNKL1-205ENST00000496549 ZNF582Q96NG8 517 aaPredicted RBP7.66□□□□□ -1.18
CRNKL1-205ENST00000496549 UBL7Q96S82 380 aaPredicted RBP7.66□□□□□ -1.18
CRNKL1-205ENST00000496549 ABHD1Q96SE0 405 aa7.66□□□□□ -1.18
CRNKL1-205ENST00000496549 ACTRT3Q9BYD9 372 aa7.66□□□□□ -1.18
CRNKL1-205ENST00000496549 SEC61A2Q9H9S3 476 aa7.66□□□□□ -1.18
CRNKL1-205ENST00000496549 SLC52A3Q9NQ40 469 aa7.66□□□□□ -1.18
CRNKL1-205ENST00000496549 CRLS1Q9UJA2 301 aa7.66□□□□□ -1.18
CRNKL1-205ENST00000496549 FBXW11Q9UKB1 542 aa7.66□□□□□ -1.18
CRNKL1-205ENST00000496549 TMEM184BQ9Y519 407 aaPredicted RBP7.66□□□□□ -1.18
CRNKL1-205ENST00000496549 BACE2Q9Y5Z0 518 aa7.66□□□□□ -1.18
CRNKL1-205ENST00000496549 OR5H15A6NDH6 313 aa7.65□□□□□ -1.18
CRNKL1-205ENST00000496549 OR5H14A6NHG9 310 aa7.65□□□□□ -1.18
CRNKL1-205ENST00000496549 OR5H1A6NKK0 313 aa7.65□□□□□ -1.18
CRNKL1-205ENST00000496549 ZNF208O43345 1280 aa7.65□□□□□ -1.18
CRNKL1-205ENST00000496549 TCF21O43680 179 aa7.65□□□□□ -1.18
CRNKL1-205ENST00000496549 IFNA6P05013 189 aa7.65□□□□□ -1.18
CRNKL1-205ENST00000496549 ANXA4P09525 319 aaPredicted RBP7.65□□□□□ -1.18
CRNKL1-205ENST00000496549 GPX2P18283 190 aa7.65□□□□□ -1.18
CRNKL1-205ENST00000496549 RNF144AP50876 292 aaPredicted RBP7.65□□□□□ -1.18
CRNKL1-205ENST00000496549 PCBP4P57723 403 aaKnown RBP7.65□□□□□ -1.18
CRNKL1-205ENST00000496549 ST8SIA6P61647 398 aa7.65□□□□□ -1.18
CRNKL1-205ENST00000496549 CXADRP78310 365 aa7.65□□□□□ -1.18
CRNKL1-205ENST00000496549 DHODHQ02127 395 aa7.65□□□□□ -1.18
CRNKL1-205ENST00000496549 CHIT1Q13231 466 aa7.65□□□□□ -1.18
CRNKL1-205ENST00000496549 OR2T2Q6IF00 324 aa7.65□□□□□ -1.18
CRNKL1-205ENST00000496549 DNAJB3Q8WWF6 145 aa7.65□□□□□ -1.18
CRNKL1-205ENST00000496549 EDARADDQ8WWZ3 215 aa7.65□□□□□ -1.18
CRNKL1-205ENST00000496549 SEMA3CQ99985 751 aa7.65□□□□□ -1.18
CRNKL1-205ENST00000496549 TUBG2Q9NRH3 451 aa7.65□□□□□ -1.18
CRNKL1-205ENST00000496549 PIGVQ9NUD9 493 aa7.65□□□□□ -1.18
CRNKL1-205ENST00000496549 A0A0B4J2A0 478 aa7.65□□□□□ -1.18
CRNKL1-205ENST00000496549 EEF1E1-BLOC1S5C9J1V9 151 aa7.65□□□□□ -1.18
CRNKL1-205ENST00000496549 SH3BGRLO75368 114 aa7.65□□□□□ -1.18
CRNKL1-205ENST00000496549 CH25HO95992 272 aa7.65□□□□□ -1.18
CRNKL1-205ENST00000496549 QDPRP09417 244 aa7.65□□□□□ -1.18
CRNKL1-205ENST00000496549 METTL15P1P0C7V9 234 aa7.65□□□□□ -1.18
CRNKL1-205ENST00000496549 LINC00614P0C842 121 aa7.65□□□□□ -1.18
CRNKL1-205ENST00000496549 HSD3B1P14060 373 aa7.65□□□□□ -1.18
CRNKL1-205ENST00000496549 DPEP1P16444 411 aa7.65□□□□□ -1.18
CRNKL1-205ENST00000496549 ITPKAP23677 461 aa7.65□□□□□ -1.18
CRNKL1-205ENST00000496549 RPL4P36578 427 aaKnown RBP7.65□□□□□ -1.18
CRNKL1-205ENST00000496549 MAPK9P45984 424 aa7.65□□□□□ -1.18
CRNKL1-205ENST00000496549 NDUFV1P49821 464 aa7.65□□□□□ -1.18
CRNKL1-205ENST00000496549 F2RL1P55085 397 aa7.65□□□□□ -1.18
CRNKL1-205ENST00000496549 RGNQ15493 299 aa7.65□□□□□ -1.18
CRNKL1-205ENST00000496549 SV2CQ496J9 727 aa7.65□□□□□ -1.18
CRNKL1-205ENST00000496549 ZDHHC20Q5W0Z9 365 aa7.65□□□□□ -1.18
CRNKL1-205ENST00000496549 GGNBP1Q5YKI7 109 aa7.65□□□□□ -1.18
CRNKL1-205ENST00000496549 PLBD1Q6P4A8 553 aa7.65□□□□□ -1.18
CRNKL1-205ENST00000496549 VSIG10LQ86VR7 867 aa7.65□□□□□ -1.18
CRNKL1-205ENST00000496549 GID4Q8IVV7 300 aa7.65□□□□□ -1.18
CRNKL1-205ENST00000496549 FAM26EQ8N5C1 309 aa7.65□□□□□ -1.18
CRNKL1-205ENST00000496549 PCSK9Q8NBP7 692 aaKnown RBP7.65□□□□□ -1.18
CRNKL1-205ENST00000496549 FAM98AQ8NCA5 519 aaKnown RBP7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms