RNA–Protein interactions for RNA: ENST00000496342.1

RHBDD3-207, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 849 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-207ENST00000496342 ZNF563Q8TA94 476 aa15.73■□□□□ 0.11
RHBDD3-207ENST00000496342 OSTF1Q92882 214 aa15.73■□□□□ 0.11
RHBDD3-207ENST00000496342 STARD4Q96DR4 205 aa15.73■□□□□ 0.11
RHBDD3-207ENST00000496342 RBM24Q9BX46 236 aaKnown RBP15.73■□□□□ 0.11
RHBDD3-207ENST00000496342 PRRG4Q9BZD6 226 aa15.73■□□□□ 0.11
RHBDD3-207ENST00000496342 CRIM1Q9NZV1 1036 aa15.73■□□□□ 0.11
RHBDD3-207ENST00000496342 PACSIN3Q9UKS6 424 aa15.73■□□□□ 0.11
RHBDD3-207ENST00000496342 DCHS2Q6V1P9 2916 aa15.73■□□□□ 0.11
RHBDD3-207ENST00000496342 A0A1W2PP18 115 aa15.72■□□□□ 0.11
RHBDD3-207ENST00000496342 ETV2O00321 342 aaPredicted RBP15.72■□□□□ 0.11
RHBDD3-207ENST00000496342 GKN3PP0CG01 181 aa15.72■□□□□ 0.11
RHBDD3-207ENST00000496342 NID1P14543 1247 aa15.72■□□□□ 0.11
RHBDD3-207ENST00000496342 IL7RP16871 459 aa15.72■□□□□ 0.11
RHBDD3-207ENST00000496342 PGCP20142 388 aa15.72■□□□□ 0.11
RHBDD3-207ENST00000496342 CCNA2P20248 432 aa15.72■□□□□ 0.11
RHBDD3-207ENST00000496342 ADH6P28332 368 aa15.72■□□□□ 0.11
RHBDD3-207ENST00000496342 CRISP3P54108 245 aa15.72■□□□□ 0.11
RHBDD3-207ENST00000496342 GUSBP1Q15486 140 aa15.72■□□□□ 0.11
RHBDD3-207ENST00000496342 ZNF239Q16600 458 aaKnown RBP15.72■□□□□ 0.11
RHBDD3-207ENST00000496342 DLEU7Q6UYE1 221 aa15.72■□□□□ 0.11
RHBDD3-207ENST00000496342 OR52P1PQ8NH57 321 aa15.72■□□□□ 0.11
RHBDD3-207ENST00000496342 NFKBIDQ8NI38 313 aa15.72■□□□□ 0.11
RHBDD3-207ENST00000496342 LINC01560Q8TB33 94 aa15.72■□□□□ 0.11
RHBDD3-207ENST00000496342 CPPED1Q9BRF8 314 aaPredicted RBP15.72■□□□□ 0.11
RHBDD3-207ENST00000496342 RSPO3Q9BXY4 272 aaPredicted RBP15.72■□□□□ 0.11
RHBDD3-207ENST00000496342 MED4Q9NPJ6 270 aa15.72■□□□□ 0.11
RHBDD3-207ENST00000496342 CTPS2Q9NRF8 586 aa15.72■□□□□ 0.11
RHBDD3-207ENST00000496342 ACER3Q9NUN7 267 aa15.72■□□□□ 0.11
RHBDD3-207ENST00000496342 STOML1Q9UBI4 398 aa15.72■□□□□ 0.11
RHBDD3-207ENST00000496342 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.72■□□□□ 0.11
RHBDD3-207ENST00000496342 ZNF443Q9Y2A4 671 aaPredicted RBP15.72■□□□□ 0.11
RHBDD3-207ENST00000496342 CHST2Q9Y4C5 530 aa15.72■□□□□ 0.11
RHBDD3-207ENST00000496342 SYNGR4O95473 234 aa15.71■□□□□ 0.11
RHBDD3-207ENST00000496342 DBIP07108 87 aaKnown RBP15.71■□□□□ 0.11
RHBDD3-207ENST00000496342 TROVE2P10155 538 aaKnown RBP eCLIP15.71■□□□□ 0.11
RHBDD3-207ENST00000496342 IDH2P48735 452 aaKnown RBP15.71■□□□□ 0.11
RHBDD3-207ENST00000496342 OR2A2Q6IF42 318 aa15.71■□□□□ 0.11
RHBDD3-207ENST00000496342 DHDDSQ86SQ9 333 aa15.71■□□□□ 0.11
RHBDD3-207ENST00000496342 PEX5LQ8IYB4 626 aa15.71■□□□□ 0.11
RHBDD3-207ENST00000496342 CLIP4Q8N3C7 705 aa15.71■□□□□ 0.11
RHBDD3-207ENST00000496342 ABHD3Q8WU67 409 aa15.71■□□□□ 0.11
RHBDD3-207ENST00000496342 ST8SIA1Q92185 356 aa15.71■□□□□ 0.11
RHBDD3-207ENST00000496342 C14orf79Q96F83 325 aa15.71■□□□□ 0.11
RHBDD3-207ENST00000496342 LURAP1Q96LR2 239 aa15.71■□□□□ 0.11
RHBDD3-207ENST00000496342 OR5B2Q96R09 309 aa15.71■□□□□ 0.11
RHBDD3-207ENST00000496342 ZNF559Q9BR84 538 aa15.71■□□□□ 0.11
RHBDD3-207ENST00000496342 SIKE1Q9BRV8 207 aa15.71■□□□□ 0.11
RHBDD3-207ENST00000496342 MTHFD2LQ9H903 347 aaPredicted RBP15.71■□□□□ 0.11
RHBDD3-207ENST00000496342 A4GALTQ9NPC4 353 aa15.71■□□□□ 0.11
RHBDD3-207ENST00000496342 EXOSC3Q9NQT5 275 aaKnown RBP15.71■□□□□ 0.11
RHBDD3-207ENST00000496342 LEF1Q9UJU2 399 aaPredicted RBP15.71■□□□□ 0.11
RHBDD3-207ENST00000496342 MCTS1Q9ULC4 181 aaKnown RBP15.71■□□□□ 0.11
RHBDD3-207ENST00000496342 TRIM33Q9UPN9 1127 aa15.71■□□□□ 0.11
RHBDD3-207ENST00000496342 NOTCH2Q04721 2471 aa15.71■□□□□ 0.1
RHBDD3-207ENST00000496342 APCP25054 2843 aa15.71■□□□□ 0.1
RHBDD3-207ENST00000496342 FRS3O43559 492 aa15.7■□□□□ 0.1
RHBDD3-207ENST00000496342 CGAP01215 116 aa15.7■□□□□ 0.1
RHBDD3-207ENST00000496342 ARAFP10398 606 aa15.7■□□□□ 0.1
RHBDD3-207ENST00000496342 FCGR2AP12318 317 aa15.7■□□□□ 0.1
RHBDD3-207ENST00000496342 BMP2P12643 396 aa15.7■□□□□ 0.1
RHBDD3-207ENST00000496342 PRG2P13727 222 aa15.7■□□□□ 0.1
RHBDD3-207ENST00000496342 SSTR2P30874 369 aa15.7■□□□□ 0.1
RHBDD3-207ENST00000496342 KIR2DL3P43628 341 aa15.7■□□□□ 0.1
RHBDD3-207ENST00000496342 ARFIP2P53365 341 aa15.7■□□□□ 0.1
RHBDD3-207ENST00000496342 CARD18P57730 90 aa15.7■□□□□ 0.1
RHBDD3-207ENST00000496342 MTPNP58546 118 aa15.7■□□□□ 0.1
RHBDD3-207ENST00000496342 EEF1A1P68104 462 aaKnown RBP15.7■□□□□ 0.1
RHBDD3-207ENST00000496342 EPS8Q12929 822 aa15.7■□□□□ 0.1
RHBDD3-207ENST00000496342 FADDQ13158 208 aa15.7■□□□□ 0.1
RHBDD3-207ENST00000496342 GCNT6Q5T4J0 391 aa15.7■□□□□ 0.1
RHBDD3-207ENST00000496342 C3orf33Q6P1S2 294 aa15.7■□□□□ 0.1
RHBDD3-207ENST00000496342 ZNF474Q6S9Z5 364 aaPredicted RBP15.7■□□□□ 0.1
RHBDD3-207ENST00000496342 COMTD1Q86VU5 262 aa15.7■□□□□ 0.1
RHBDD3-207ENST00000496342 OIT3Q8WWZ8 545 aa15.7■□□□□ 0.1
RHBDD3-207ENST00000496342 CCDC106Q9BWC9 280 aa15.7■□□□□ 0.1
RHBDD3-207ENST00000496342 OR11A1Q9GZK7 315 aa15.7■□□□□ 0.1
RHBDD3-207ENST00000496342 PIGMQ9H3S5 423 aa15.7■□□□□ 0.1
RHBDD3-207ENST00000496342 RAD21L1Q9H4I0 556 aa15.7■□□□□ 0.1
RHBDD3-207ENST00000496342 RABEP2Q9H5N1 569 aa15.7■□□□□ 0.1
RHBDD3-207ENST00000496342 CCDC134Q9H6E4 229 aa15.7■□□□□ 0.1
RHBDD3-207ENST00000496342 A8MXE2 369 aa15.69■□□□□ 0.1
RHBDD3-207ENST00000496342 FBP2O00757 339 aa15.69■□□□□ 0.1
RHBDD3-207ENST00000496342 ANGPT2O15123 496 aa15.69■□□□□ 0.1
RHBDD3-207ENST00000496342 PLGP00747 810 aaPredicted RBP15.69■□□□□ 0.1
RHBDD3-207ENST00000496342 CRHP06850 196 aa15.69■□□□□ 0.1
RHBDD3-207ENST00000496342 ENPP1P22413 925 aa15.69■□□□□ 0.1
RHBDD3-207ENST00000496342 SLC7A1P30825 629 aa15.69■□□□□ 0.1
RHBDD3-207ENST00000496342 CCKARP32238 428 aa15.69■□□□□ 0.1
RHBDD3-207ENST00000496342 MDH1P40925 334 aaKnown RBP15.69■□□□□ 0.1
RHBDD3-207ENST00000496342 MAGEA8P43361 318 aa15.69■□□□□ 0.1
RHBDD3-207ENST00000496342 FAM27E3Q08E93 113 aa15.69■□□□□ 0.1
RHBDD3-207ENST00000496342 CAPRIN1Q14444 709 aaKnown RBP15.69■□□□□ 0.1
RHBDD3-207ENST00000496342 LIN52Q52LA3 116 aa15.69■□□□□ 0.1
RHBDD3-207ENST00000496342 PDSS1Q5T2R2 415 aa15.69■□□□□ 0.1
RHBDD3-207ENST00000496342 TMEM200AQ86VY9 491 aa15.69■□□□□ 0.1
RHBDD3-207ENST00000496342 CMIPQ8IY22 773 aa15.69■□□□□ 0.1
RHBDD3-207ENST00000496342 ZNF610Q8N9Z0 462 aa15.69■□□□□ 0.1
RHBDD3-207ENST00000496342 RNF128Q8TEB7 428 aa15.69■□□□□ 0.1
RHBDD3-207ENST00000496342 TMEM234Q8WY98 164 aa15.69■□□□□ 0.1
RHBDD3-207ENST00000496342 NRGNQ92686 78 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms