RNA–Protein interactions for RNA: ENST00000496222.1

TRIM59-207, Transcript of tripartite motif containing 59, humanhuman

TSL 4

Gene TRIM59, Length 603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-207ENST00000496222 MTHFD2LQ9H903 347 aaPredicted RBP11.02□□□□□ -0.65
TRIM59-207ENST00000496222 EXOSC3Q9NQT5 275 aaKnown RBP11.02□□□□□ -0.65
TRIM59-207ENST00000496222 PLSCR4Q9NRQ2 329 aa11.02□□□□□ -0.65
TRIM59-207ENST00000496222 RASSF1Q9NS23 344 aa11.02□□□□□ -0.65
TRIM59-207ENST00000496222 ACER3Q9NUN7 267 aa11.02□□□□□ -0.65
TRIM59-207ENST00000496222 PAQR5Q9NXK6 330 aaPredicted RBP11.02□□□□□ -0.65
TRIM59-207ENST00000496222 SLC25A37Q9NYZ2 338 aa11.02□□□□□ -0.65
TRIM59-207ENST00000496222 SLAMF8Q9P0V8 285 aa11.02□□□□□ -0.65
TRIM59-207ENST00000496222 SLC35A3Q9Y2D2 325 aa11.02□□□□□ -0.65
TRIM59-207ENST00000496222 GMEB1Q9Y692 573 aa11.02□□□□□ -0.65
TRIM59-207ENST00000496222 HIVEP1P15822 2718 aa11.02□□□□□ -0.65
TRIM59-207ENST00000496222 AKAP6Q13023 2319 aa11.02□□□□□ -0.65
TRIM59-207ENST00000496222 A0A096LPI6 279 aa11.01□□□□□ -0.65
TRIM59-207ENST00000496222 TUBAL3A6NHL2 446 aa11.01□□□□□ -0.65
TRIM59-207ENST00000496222 A6NNC1 897 aa11.01□□□□□ -0.65
TRIM59-207ENST00000496222 FCGR2AP12318 317 aa11.01□□□□□ -0.65
TRIM59-207ENST00000496222 BMP2P12643 396 aa11.01□□□□□ -0.65
TRIM59-207ENST00000496222 ME2P23368 584 aa11.01□□□□□ -0.65
TRIM59-207ENST00000496222 CCKARP32238 428 aa11.01□□□□□ -0.65
TRIM59-207ENST00000496222 ATP4BP51164 291 aa11.01□□□□□ -0.65
TRIM59-207ENST00000496222 CCR4P51679 360 aa11.01□□□□□ -0.65
TRIM59-207ENST00000496222 SIRPAP78324 504 aa11.01□□□□□ -0.65
TRIM59-207ENST00000496222 FAM27E3Q08E93 113 aa11.01□□□□□ -0.65
TRIM59-207ENST00000496222 SELENBP1Q13228 472 aa11.01□□□□□ -0.65
TRIM59-207ENST00000496222 ZNF239Q16600 458 aaKnown RBP11.01□□□□□ -0.65
TRIM59-207ENST00000496222 PAGE3Q5JUK9 113 aa11.01□□□□□ -0.65
TRIM59-207ENST00000496222 LRIF1Q5T3J3 769 aa11.01□□□□□ -0.65
TRIM59-207ENST00000496222 C22orf34Q6ZV56 151 aa11.01□□□□□ -0.65
TRIM59-207ENST00000496222 PLEKHM3Q6ZWE6 761 aa11.01□□□□□ -0.65
TRIM59-207ENST00000496222 LSRQ86X29 649 aaPredicted RBP11.01□□□□□ -0.65
TRIM59-207ENST00000496222 C10orf111Q8N326 155 aa11.01□□□□□ -0.65
TRIM59-207ENST00000496222 ZNF610Q8N9Z0 462 aa11.01□□□□□ -0.65
TRIM59-207ENST00000496222 RNF128Q8TEB7 428 aa11.01□□□□□ -0.65
TRIM59-207ENST00000496222 GMPPAQ96IJ6 420 aaPredicted RBP11.01□□□□□ -0.65
TRIM59-207ENST00000496222 GPATCH1Q9BRR8 931 aaKnown RBP11.01□□□□□ -0.65
TRIM59-207ENST00000496222 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.01□□□□□ -0.65
TRIM59-207ENST00000496222 TMEM45AQ9NWC5 275 aa11.01□□□□□ -0.65
TRIM59-207ENST00000496222 DNAJB12Q9NXW2 375 aaKnown RBP11.01□□□□□ -0.65
TRIM59-207ENST00000496222 CCDC167Q9P0B6 97 aa11.01□□□□□ -0.65
TRIM59-207ENST00000496222 ING1Q9UK53 422 aaPredicted RBP11.01□□□□□ -0.65
TRIM59-207ENST00000496222 MCTS1Q9ULC4 181 aaKnown RBP11.01□□□□□ -0.65
TRIM59-207ENST00000496222 CHST2Q9Y4C5 530 aa11.01□□□□□ -0.65
TRIM59-207ENST00000496222 FREM1Q5H8C1 2179 aa11□□□□□ -0.65
TRIM59-207ENST00000496222 CYP7B1O75881 506 aa11□□□□□ -0.65
TRIM59-207ENST00000496222 SMNDC1O75940 238 aaKnown RBP eCLIP11□□□□□ -0.65
TRIM59-207ENST00000496222 NUDT7P0C024 238 aa11□□□□□ -0.65
TRIM59-207ENST00000496222 NR2F1P10589 423 aa11□□□□□ -0.65
TRIM59-207ENST00000496222 PGCP20142 388 aa11□□□□□ -0.65
TRIM59-207ENST00000496222 KLK2P20151 261 aa11□□□□□ -0.65
TRIM59-207ENST00000496222 ANXA11P50995 505 aaKnown RBP11□□□□□ -0.65
TRIM59-207ENST00000496222 RGNQ15493 299 aa11□□□□□ -0.65
TRIM59-207ENST00000496222 TESK1Q15569 626 aa11□□□□□ -0.65
TRIM59-207ENST00000496222 ADGRG3Q86Y34 549 aa11□□□□□ -0.65
TRIM59-207ENST00000496222 CMIPQ8IY22 773 aa11□□□□□ -0.65
TRIM59-207ENST00000496222 ROBO4Q8WZ75 1007 aa11□□□□□ -0.65
TRIM59-207ENST00000496222 NRGNQ92686 78 aa11□□□□□ -0.65
TRIM59-207ENST00000496222 SPDL1Q96EA4 605 aa11□□□□□ -0.65
TRIM59-207ENST00000496222 THOC1Q96FV9 657 aaKnown RBP11□□□□□ -0.65
TRIM59-207ENST00000496222 VAPAQ9P0L0 249 aa11□□□□□ -0.65
TRIM59-207ENST00000496222 CLEC4AQ9UMR7 237 aa11□□□□□ -0.65
TRIM59-207ENST00000496222 TESMINQ9Y4I5 508 aa11□□□□□ -0.65
TRIM59-207ENST00000496222 ZNF469Q96JG9 3925 aaPredicted RBP11□□□□□ -0.65
TRIM59-207ENST00000496222 A0A1W2PNR3 127 aa10.99□□□□□ -0.65
TRIM59-207ENST00000496222 CDHR4A6H8M9 788 aa10.99□□□□□ -0.65
TRIM59-207ENST00000496222 GJE1A6NN92 205 aa10.99□□□□□ -0.65
TRIM59-207ENST00000496222 CLIC1O00299 241 aa10.99□□□□□ -0.65
TRIM59-207ENST00000496222 FAAHO00519 579 aa10.99□□□□□ -0.65
TRIM59-207ENST00000496222 AP3D1O14617 1153 aa10.99□□□□□ -0.65
TRIM59-207ENST00000496222 SYNGR4O95473 234 aa10.99□□□□□ -0.65
TRIM59-207ENST00000496222 ENPP1P22413 925 aa10.99□□□□□ -0.65
TRIM59-207ENST00000496222 AGTR1P30556 359 aa10.99□□□□□ -0.65
TRIM59-207ENST00000496222 CD79BP40259 229 aa10.99□□□□□ -0.65
TRIM59-207ENST00000496222 ACAA2P42765 397 aaKnown RBP10.99□□□□□ -0.65
TRIM59-207ENST00000496222 CRATP43155 626 aa10.99□□□□□ -0.65
TRIM59-207ENST00000496222 CPA2P48052 419 aa10.99□□□□□ -0.65
TRIM59-207ENST00000496222 RAC3P60763 192 aa10.99□□□□□ -0.65
TRIM59-207ENST00000496222 DSTNP60981 165 aa10.99□□□□□ -0.65
TRIM59-207ENST00000496222 STX1BP61266 288 aa10.99□□□□□ -0.65
TRIM59-207ENST00000496222 IRX1P78414 480 aaPredicted RBP10.99□□□□□ -0.65
TRIM59-207ENST00000496222 HPCAP84074 193 aa10.99□□□□□ -0.65
TRIM59-207ENST00000496222 MERTKQ12866 999 aa10.99□□□□□ -0.65
TRIM59-207ENST00000496222 SQLEQ14534 574 aa10.99□□□□□ -0.65
TRIM59-207ENST00000496222 AGKQ53H12 422 aa10.99□□□□□ -0.65
TRIM59-207ENST00000496222 C6orf10Q5SRN2 563 aa10.99□□□□□ -0.65
TRIM59-207ENST00000496222 PDSS1Q5T2R2 415 aa10.99□□□□□ -0.65
TRIM59-207ENST00000496222 MRPL2Q5T653 305 aaKnown RBP10.99□□□□□ -0.65
TRIM59-207ENST00000496222 C3orf33Q6P1S2 294 aa10.99□□□□□ -0.65
TRIM59-207ENST00000496222 DLEU7Q6UYE1 221 aa10.99□□□□□ -0.65
TRIM59-207ENST00000496222 CDH24Q86UP0 819 aa10.99□□□□□ -0.65
TRIM59-207ENST00000496222 ARFGAP2Q8N6H7 521 aa10.99□□□□□ -0.65
TRIM59-207ENST00000496222 ATP6V1C2Q8NEY4 427 aa10.99□□□□□ -0.65
TRIM59-207ENST00000496222 OR6K3Q8NGY3 331 aa10.99□□□□□ -0.65
TRIM59-207ENST00000496222 ABHD3Q8WU67 409 aa10.99□□□□□ -0.65
TRIM59-207ENST00000496222 WDR60Q8WVS4 1066 aa10.99□□□□□ -0.65
TRIM59-207ENST00000496222 TMEM234Q8WY98 164 aa10.99□□□□□ -0.65
TRIM59-207ENST00000496222 CPNE4Q96A23 557 aaPredicted RBP10.99□□□□□ -0.65
TRIM59-207ENST00000496222 MS4A3Q96HJ5 214 aa10.99□□□□□ -0.65
TRIM59-207ENST00000496222 DACH2Q96NX9 599 aa10.99□□□□□ -0.65
TRIM59-207ENST00000496222 LIME1Q9H400 295 aa10.99□□□□□ -0.65
TRIM59-207ENST00000496222 IKZF5Q9H5V7 419 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms