RNA–Protein interactions for RNA: ENST00000496050.1

SSR3-208, Transcript of signal sequence receptor subunit 3, human

TSL 4 BASIC

Gene SSR3, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SSR3-208	ENST00000496050	SMIM28	A0A1B0GU29	152 aa		4.07	□□□□□ -1.76
SSR3-208	ENST00000496050		A0A1W2PQ72	361 aa		4.07	□□□□□ -1.76
SSR3-208	ENST00000496050	GNA14	O95837	355 aa		4.07	□□□□□ -1.76
SSR3-208	ENST00000496050	LALBA	P00709	142 aa		4.07	□□□□□ -1.76
SSR3-208	ENST00000496050	IL1B	P01584	269 aa		4.07	□□□□□ -1.76
SSR3-208	ENST00000496050	CAPN1	P07384	714 aa		4.07	□□□□□ -1.76
SSR3-208	ENST00000496050	ZP3	P21754	424 aa		4.07	□□□□□ -1.76
SSR3-208	ENST00000496050	VDAC1	P21796	283 aa		4.07	□□□□□ -1.76
SSR3-208	ENST00000496050	MMP11	P24347	488 aa		4.07	□□□□□ -1.76
SSR3-208	ENST00000496050	ANXA13	P27216	316 aa		4.07	□□□□□ -1.76
SSR3-208	ENST00000496050	SSR1	P43307	286 aa	Known RBP	4.07	□□□□□ -1.76
SSR3-208	ENST00000496050	PLK1	P53350	603 aa		4.07	□□□□□ -1.76
SSR3-208	ENST00000496050	CHRNB3	Q05901	458 aa		4.07	□□□□□ -1.76
SSR3-208	ENST00000496050	BCL2L1	Q07817	233 aa		4.07	□□□□□ -1.76
SSR3-208	ENST00000496050	CUL1	Q13616	776 aa		4.07	□□□□□ -1.76
SSR3-208	ENST00000496050	KIAA0040	Q15053	153 aa		4.07	□□□□□ -1.76
SSR3-208	ENST00000496050	TRIM16L	Q309B1	348 aa		4.07	□□□□□ -1.76
SSR3-208	ENST00000496050	CFAP221	Q4G0U5	840 aa		4.07	□□□□□ -1.76
SSR3-208	ENST00000496050	OR2B11	Q5JQS5	317 aa		4.07	□□□□□ -1.76
SSR3-208	ENST00000496050		Q6ZR54	194 aa		4.07	□□□□□ -1.76
SSR3-208	ENST00000496050	FRA10AC1	Q70Z53	315 aa		4.07	□□□□□ -1.76
SSR3-208	ENST00000496050	SVOPL	Q8N434	492 aa		4.07	□□□□□ -1.76
SSR3-208	ENST00000496050	ZNF525	Q8N782	197 aa		4.07	□□□□□ -1.76
SSR3-208	ENST00000496050	ATP6V0D2	Q8N8Y2	350 aa		4.07	□□□□□ -1.76
SSR3-208	ENST00000496050	OR5L2	Q8NGL0	311 aa		4.07	□□□□□ -1.76
SSR3-208	ENST00000496050	FGGY	Q96C11	551 aa		4.07	□□□□□ -1.76
SSR3-208	ENST00000496050	VSIG2	Q96IQ7	327 aa		4.07	□□□□□ -1.76
SSR3-208	ENST00000496050	SERAC1	Q96JX3	654 aa		4.07	□□□□□ -1.76
SSR3-208	ENST00000496050	C19orf24	Q9BVV8	132 aa		4.07	□□□□□ -1.76
SSR3-208	ENST00000496050	CAPS2	Q9BXY5	557 aa		4.07	□□□□□ -1.76
SSR3-208	ENST00000496050	RHBG	Q9H310	441 aa		4.07	□□□□□ -1.76
SSR3-208	ENST00000496050	LRRN3	Q9H3W5	708 aa		4.07	□□□□□ -1.76
SSR3-208	ENST00000496050	FANCF	Q9NPI8	374 aa		4.07	□□□□□ -1.76
SSR3-208	ENST00000496050	ZNF275	Q9NSD4	429 aa	Predicted RBP	4.07	□□□□□ -1.76
SSR3-208	ENST00000496050	SIGLEC8	Q9NYZ4	499 aa		4.07	□□□□□ -1.76
SSR3-208	ENST00000496050		Q9UF83	564 aa		4.07	□□□□□ -1.76
SSR3-208	ENST00000496050	KLHL21	Q9UJP4	597 aa		4.07	□□□□□ -1.76
SSR3-208	ENST00000496050	CDH9	Q9ULB4	789 aa		4.07	□□□□□ -1.76
SSR3-208	ENST00000496050	PRPF19	Q9UMS4	504 aa	Known RBP	4.07	□□□□□ -1.76
SSR3-208	ENST00000496050	ATP10A	O60312	1499 aa		4.06	□□□□□ -1.76
SSR3-208	ENST00000496050	COL2A1	P02458	1487 aa	Predicted RBP	4.06	□□□□□ -1.76
SSR3-208	ENST00000496050	RPAP1	Q9BWH6	1393 aa	Predicted RBP	4.06	□□□□□ -1.76
SSR3-208	ENST00000496050	CFAP65	Q6ZU64	1925 aa	Known RBP	4.06	□□□□□ -1.76
SSR3-208	ENST00000496050		A0A1B0GWB2	263 aa		4.06	□□□□□ -1.76
SSR3-208	ENST00000496050	FAM168B	A1KXE4	195 aa		4.06	□□□□□ -1.76
SSR3-208	ENST00000496050	PRKY	O43930	277 aa		4.06	□□□□□ -1.76
SSR3-208	ENST00000496050	TBL1X	O60907	577 aa		4.06	□□□□□ -1.76
SSR3-208	ENST00000496050	SERF1A	O75920	110 aa		4.06	□□□□□ -1.76
SSR3-208	ENST00000496050	CCDC166	P0CW27	439 aa		4.06	□□□□□ -1.76
SSR3-208	ENST00000496050	PRKX	P51817	358 aa		4.06	□□□□□ -1.76
SSR3-208	ENST00000496050	ZMYND11	Q15326	602 aa		4.06	□□□□□ -1.76
SSR3-208	ENST00000496050	LRRC36	Q1X8D7	754 aa		4.06	□□□□□ -1.76
SSR3-208	ENST00000496050	TPGS2	Q68CL5	300 aa		4.06	□□□□□ -1.76
SSR3-208	ENST00000496050	MOB1B	Q7L9L4	216 aa		4.06	□□□□□ -1.76
SSR3-208	ENST00000496050	TRPM8	Q7Z2W7	1104 aa		4.06	□□□□□ -1.76
SSR3-208	ENST00000496050	NRM	Q8IXM6	262 aa		4.06	□□□□□ -1.76
SSR3-208	ENST00000496050	ZBED8	Q8IZ13	594 aa		4.06	□□□□□ -1.76
SSR3-208	ENST00000496050	MRAP	Q8TCY5	172 aa		4.06	□□□□□ -1.76
SSR3-208	ENST00000496050	SHC3	Q92529	594 aa		4.06	□□□□□ -1.76
SSR3-208	ENST00000496050	HAVCR1	Q96D42	359 aa		4.06	□□□□□ -1.76
SSR3-208	ENST00000496050	SLC25A38	Q96DW6	304 aa		4.06	□□□□□ -1.76
SSR3-208	ENST00000496050	RPRD1A	Q96P16	312 aa	Predicted RBP	4.06	□□□□□ -1.76
SSR3-208	ENST00000496050	SECISBP2	Q96T21	854 aa	Known RBP	4.06	□□□□□ -1.76
SSR3-208	ENST00000496050	NPAS2	Q99743	824 aa		4.06	□□□□□ -1.76
SSR3-208	ENST00000496050	SRXN1	Q9BYN0	137 aa		4.06	□□□□□ -1.76
SSR3-208	ENST00000496050	DEFB126	Q9BYW3	111 aa		4.06	□□□□□ -1.76
SSR3-208	ENST00000496050	CHIA	Q9BZP6	476 aa		4.06	□□□□□ -1.76
SSR3-208	ENST00000496050	ISG20L2	Q9H9L3	353 aa	Known RBP	4.06	□□□□□ -1.76
SSR3-208	ENST00000496050	RAB18	Q9NP72	206 aa		4.06	□□□□□ -1.76
SSR3-208	ENST00000496050	SMOX	Q9NWM0	555 aa		4.06	□□□□□ -1.76
SSR3-208	ENST00000496050	B3GNT2	Q9NY97	397 aa		4.06	□□□□□ -1.76
SSR3-208	ENST00000496050	PHF11	Q9UIL8	331 aa		4.06	□□□□□ -1.76
SSR3-208	ENST00000496050	HPCAL4	Q9UM19	191 aa		4.06	□□□□□ -1.76
SSR3-208	ENST00000496050	AK6	Q9Y3D8	172 aa	Known RBP	4.06	□□□□□ -1.76
SSR3-208	ENST00000496050	KANK1	Q14678	1352 aa		4.05	□□□□□ -1.76
SSR3-208	ENST00000496050	KIF2A	O00139	706 aa	Predicted RBP	4.05	□□□□□ -1.76
SSR3-208	ENST00000496050	POLR2D	O15514	142 aa	Known RBP	4.05	□□□□□ -1.76
SSR3-208	ENST00000496050	NTS	P30990	170 aa		4.05	□□□□□ -1.76
SSR3-208	ENST00000496050	FGF9	P31371	208 aa	Predicted RBP	4.05	□□□□□ -1.76
SSR3-208	ENST00000496050	RPL13A	P40429	203 aa	Known RBP	4.05	□□□□□ -1.76
SSR3-208	ENST00000496050	TAF6	P49848	677 aa		4.05	□□□□□ -1.76
SSR3-208	ENST00000496050	SLC26A2	P50443	739 aa		4.05	□□□□□ -1.76
SSR3-208	ENST00000496050	DAP3	P51398	398 aa	Known RBP	4.05	□□□□□ -1.76
SSR3-208	ENST00000496050	HSPA2	P54652	639 aa		4.05	□□□□□ -1.76
SSR3-208	ENST00000496050	C1orf61	Q13536	156 aa		4.05	□□□□□ -1.76
SSR3-208	ENST00000496050	AANAT	Q16613	207 aa		4.05	□□□□□ -1.76
SSR3-208	ENST00000496050	MAJIN	Q3KP22	176 aa		4.05	□□□□□ -1.76
SSR3-208	ENST00000496050	OR4F3	Q6IEY1	312 aa		4.05	□□□□□ -1.76
SSR3-208	ENST00000496050	C17orf82	Q86X59	251 aa	Predicted RBP	4.05	□□□□□ -1.76
SSR3-208	ENST00000496050	CD177	Q8N6Q3	437 aa		4.05	□□□□□ -1.76
SSR3-208	ENST00000496050	OR4D9	Q8NGE8	314 aa		4.05	□□□□□ -1.76
SSR3-208	ENST00000496050	OR5D13	Q8NGL4	314 aa		4.05	□□□□□ -1.76
SSR3-208	ENST00000496050	NOL4L	Q96MY1	436 aa	Predicted RBP	4.05	□□□□□ -1.76
SSR3-208	ENST00000496050	IL4I1	Q96RQ9	567 aa		4.05	□□□□□ -1.76
SSR3-208	ENST00000496050	MYCBP	Q99417	103 aa	Predicted RBP	4.05	□□□□□ -1.76
SSR3-208	ENST00000496050	MCHR1	Q99705	422 aa		4.05	□□□□□ -1.76
SSR3-208	ENST00000496050	ZNF670	Q9BS34	389 aa		4.05	□□□□□ -1.76
SSR3-208	ENST00000496050	RAB34	Q9BZG1	259 aa		4.05	□□□□□ -1.76
SSR3-208	ENST00000496050		Q9H3A6	140 aa		4.05	□□□□□ -1.76
SSR3-208	ENST00000496050	ZNF702P	Q9H963	129 aa		4.05	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms