RNA–Protein interactions for RNA: ENST00000494938.2

SCAP-213, Transcript of SREBF chaperone, humanhuman

TSL 4

Gene SCAP, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-213ENST00000494938 RYKP34925 604 aa12.88□□□□□ -0.35
SCAP-213ENST00000494938 SFTPDP35247 375 aa12.88□□□□□ -0.35
SCAP-213ENST00000494938 FADDQ13158 208 aa12.88□□□□□ -0.35
SCAP-213ENST00000494938 SNTB1Q13884 538 aaKnown RBP12.88□□□□□ -0.35
SCAP-213ENST00000494938 ADRM1Q16186 407 aa12.88□□□□□ -0.35
SCAP-213ENST00000494938 RPS26P11Q5JNZ5 115 aaPredicted RBP12.88□□□□□ -0.35
SCAP-213ENST00000494938 HBMQ6B0K9 141 aa12.88□□□□□ -0.35
SCAP-213ENST00000494938 OR2A2Q6IF42 318 aa12.88□□□□□ -0.35
SCAP-213ENST00000494938 PLEKHM3Q6ZWE6 761 aa12.88□□□□□ -0.35
SCAP-213ENST00000494938 BTLAQ7Z6A9 289 aa12.88□□□□□ -0.35
SCAP-213ENST00000494938 VRK2Q86Y07 508 aa12.88□□□□□ -0.35
SCAP-213ENST00000494938 CLIP4Q8N3C7 705 aa12.88□□□□□ -0.35
SCAP-213ENST00000494938 ATP6V1C2Q8NEY4 427 aa12.88□□□□□ -0.35
SCAP-213ENST00000494938 OR52P1PQ8NH57 321 aa12.88□□□□□ -0.35
SCAP-213ENST00000494938 ST8SIA1Q92185 356 aa12.88□□□□□ -0.35
SCAP-213ENST00000494938 RNASE6Q93091 150 aaKnown RBP12.88□□□□□ -0.35
SCAP-213ENST00000494938 CCDC106Q9BWC9 280 aa12.88□□□□□ -0.35
SCAP-213ENST00000494938 RAD21L1Q9H4I0 556 aa12.88□□□□□ -0.35
SCAP-213ENST00000494938 SAR1AQ9NR31 198 aa12.88□□□□□ -0.35
SCAP-213ENST00000494938 RLIMQ9NVW2 624 aa12.88□□□□□ -0.35
SCAP-213ENST00000494938 CALML5Q9NZT1 146 aa12.88□□□□□ -0.35
SCAP-213ENST00000494938 LEF1Q9UJU2 399 aaPredicted RBP12.88□□□□□ -0.35
SCAP-213ENST00000494938 NDUFAF1Q9Y375 327 aa12.88□□□□□ -0.35
SCAP-213ENST00000494938 KIAA1549Q9HCM3 1950 aa12.88□□□□□ -0.35
SCAP-213ENST00000494938 ABCA12Q86UK0 2595 aa12.88□□□□□ -0.35
SCAP-213ENST00000494938 CSMD1Q96PZ7 3565 aa12.87□□□□□ -0.35
SCAP-213ENST00000494938 CDHR4A6H8M9 788 aa12.87□□□□□ -0.35
SCAP-213ENST00000494938 A8MXE2 369 aa12.87□□□□□ -0.35
SCAP-213ENST00000494938 FBP2O00757 339 aa12.87□□□□□ -0.35
SCAP-213ENST00000494938 AP3D1O14617 1153 aa12.87□□□□□ -0.35
SCAP-213ENST00000494938 PGM3O95394 542 aa12.87□□□□□ -0.35
SCAP-213ENST00000494938 CGAP01215 116 aa12.87□□□□□ -0.35
SCAP-213ENST00000494938 ME2P23368 584 aa12.87□□□□□ -0.35
SCAP-213ENST00000494938 IDH2P48735 452 aaKnown RBP12.87□□□□□ -0.35
SCAP-213ENST00000494938 CRISP3P54108 245 aa12.87□□□□□ -0.35
SCAP-213ENST00000494938 MERTKQ12866 999 aa12.87□□□□□ -0.35
SCAP-213ENST00000494938 MRPL2Q5T653 305 aaKnown RBP12.87□□□□□ -0.35
SCAP-213ENST00000494938 PRAMEF8Q5VWM4 474 aa12.87□□□□□ -0.35
SCAP-213ENST00000494938 PRAMEF7Q5VXH5 474 aa12.87□□□□□ -0.35
SCAP-213ENST00000494938 ADGRG3Q86Y34 549 aa12.87□□□□□ -0.35
SCAP-213ENST00000494938 PEX5LQ8IYB4 626 aa12.87□□□□□ -0.35
SCAP-213ENST00000494938 WDR60Q8WVS4 1066 aa12.87□□□□□ -0.35
SCAP-213ENST00000494938 TMEM234Q8WY98 164 aa12.87□□□□□ -0.35
SCAP-213ENST00000494938 CPPED1Q9BRF8 314 aaPredicted RBP12.87□□□□□ -0.35
SCAP-213ENST00000494938 SRXN1Q9BYN0 137 aa12.87□□□□□ -0.35
SCAP-213ENST00000494938 PIGMQ9H3S5 423 aa12.87□□□□□ -0.35
SCAP-213ENST00000494938 PAQR5Q9NXK6 330 aaPredicted RBP12.87□□□□□ -0.35
SCAP-213ENST00000494938 EEF1E1-BLOC1S5C9J1V9 151 aa12.86□□□□□ -0.35
SCAP-213ENST00000494938 EEF1E1O43324 174 aaKnown RBP12.86□□□□□ -0.35
SCAP-213ENST00000494938 ARAFP10398 606 aa12.86□□□□□ -0.35
SCAP-213ENST00000494938 PPIBP23284 216 aaKnown RBP12.86□□□□□ -0.35
SCAP-213ENST00000494938 UQCRC1P31930 480 aa12.86□□□□□ -0.35
SCAP-213ENST00000494938 APOBEC1P41238 236 aaKnown RBP12.86□□□□□ -0.35
SCAP-213ENST00000494938 ACAA2P42765 397 aaKnown RBP12.86□□□□□ -0.35
SCAP-213ENST00000494938 EPS8Q12929 822 aa12.86□□□□□ -0.35
SCAP-213ENST00000494938 KLF10Q13118 480 aa12.86□□□□□ -0.35
SCAP-213ENST00000494938 SELENBP1Q13228 472 aa12.86□□□□□ -0.35
SCAP-213ENST00000494938 SELPLGQ14242 412 aa12.86□□□□□ -0.35
SCAP-213ENST00000494938 GNA13Q14344 377 aa12.86□□□□□ -0.35
SCAP-213ENST00000494938 PDSS1Q5T2R2 415 aa12.86□□□□□ -0.35
SCAP-213ENST00000494938 GCNT6Q5T4J0 391 aa12.86□□□□□ -0.35
SCAP-213ENST00000494938 VWA1Q6PCB0 445 aa12.86□□□□□ -0.35
SCAP-213ENST00000494938 ZNF836Q6ZNA1 936 aa12.86□□□□□ -0.35
SCAP-213ENST00000494938 LUZP2Q86TE4 346 aa12.86□□□□□ -0.35
SCAP-213ENST00000494938 LSRQ86X29 649 aaPredicted RBP12.86□□□□□ -0.35
SCAP-213ENST00000494938 CNEP1R1Q8N9A8 125 aa12.86□□□□□ -0.35
SCAP-213ENST00000494938 ROBO4Q8WZ75 1007 aa12.86□□□□□ -0.35
SCAP-213ENST00000494938 C14orf79Q96F83 325 aa12.86□□□□□ -0.35
SCAP-213ENST00000494938 ANKRD27Q96NW4 1050 aa12.86□□□□□ -0.35
SCAP-213ENST00000494938 CGREF1Q99674 301 aa12.86□□□□□ -0.35
SCAP-213ENST00000494938 COQ10BQ9H8M1 238 aa12.86□□□□□ -0.35
SCAP-213ENST00000494938 CTPS2Q9NRF8 586 aa12.86□□□□□ -0.35
SCAP-213ENST00000494938 KLHL14Q9P2G3 628 aa12.86□□□□□ -0.35
SCAP-213ENST00000494938 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.86□□□□□ -0.35
SCAP-213ENST00000494938 ZNF232Q9UNY5 417 aa12.86□□□□□ -0.35
SCAP-213ENST00000494938 ZNF443Q9Y2A4 671 aaPredicted RBP12.86□□□□□ -0.35
SCAP-213ENST00000494938 A0A1W2PNR3 127 aa12.85□□□□□ -0.35
SCAP-213ENST00000494938 CFAP73A6NFT4 308 aa12.85□□□□□ -0.35
SCAP-213ENST00000494938 GJE1A6NN92 205 aa12.85□□□□□ -0.35
SCAP-213ENST00000494938 EVPLLA8MZ36 301 aa12.85□□□□□ -0.35
SCAP-213ENST00000494938 FAAHO00519 579 aa12.85□□□□□ -0.35
SCAP-213ENST00000494938 MSTNO14793 375 aa12.85□□□□□ -0.35
SCAP-213ENST00000494938 SYNGR4O95473 234 aa12.85□□□□□ -0.35
SCAP-213ENST00000494938 THBS1P07996 1170 aa12.85□□□□□ -0.35
SCAP-213ENST00000494938 GKN3PP0CG01 181 aa12.85□□□□□ -0.35
SCAP-213ENST00000494938 KRTAP10-9P60411 292 aa12.85□□□□□ -0.35
SCAP-213ENST00000494938 LIN52Q52LA3 116 aa12.85□□□□□ -0.35
SCAP-213ENST00000494938 ZNF474Q6S9Z5 364 aaPredicted RBP12.85□□□□□ -0.35
SCAP-213ENST00000494938 FAM214BQ7L5A3 538 aa12.85□□□□□ -0.35
SCAP-213ENST00000494938 NFKBIDQ8NI38 313 aa12.85□□□□□ -0.35
SCAP-213ENST00000494938 ZNF563Q8TA94 476 aa12.85□□□□□ -0.35
SCAP-213ENST00000494938 C10orf82Q8WW14 230 aa12.85□□□□□ -0.35
SCAP-213ENST00000494938 SPATA9Q9BWV2 254 aa12.85□□□□□ -0.35
SCAP-213ENST00000494938 RBM24Q9BX46 236 aaKnown RBP12.85□□□□□ -0.35
SCAP-213ENST00000494938 PRRG4Q9BZD6 226 aa12.85□□□□□ -0.35
SCAP-213ENST00000494938 ADAM19Q9H013 955 aa12.85□□□□□ -0.35
SCAP-213ENST00000494938 TMEM38AQ9H6F2 299 aa12.85□□□□□ -0.35
SCAP-213ENST00000494938 TIGARQ9NQ88 270 aa12.85□□□□□ -0.35
SCAP-213ENST00000494938 SERINC1Q9NRX5 453 aa12.85□□□□□ -0.35
SCAP-213ENST00000494938 KCNN3Q9UGI6 736 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms