RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 TIGD2Q4W5G0 525 aa20.59■□□□□ 0.89
COL27A1-208ENST00000494780 SSX8Q7RTT4 187 aa20.59■□□□□ 0.89
COL27A1-208ENST00000494780 NEUROG1Q92886 237 aa20.59■□□□□ 0.89
COL27A1-208ENST00000494780 OR5B2Q96R09 309 aa20.59■□□□□ 0.89
COL27A1-208ENST00000494780 MDFIQ99750 246 aa20.59■□□□□ 0.89
COL27A1-208ENST00000494780 THUMPD3Q9BV44 507 aaKnown RBP20.59■□□□□ 0.89
COL27A1-208ENST00000494780 PRSS50Q9UI38 385 aa20.59■□□□□ 0.89
COL27A1-208ENST00000494780 A0A1W2PP18 115 aa20.58■□□□□ 0.89
COL27A1-208ENST00000494780 DPRXA6NFQ7 191 aa20.58■□□□□ 0.89
COL27A1-208ENST00000494780 STX11O75558 287 aa20.58■□□□□ 0.89
COL27A1-208ENST00000494780 H6PDO95479 791 aa20.58■□□□□ 0.89
COL27A1-208ENST00000494780 G6PDP11413 515 aa20.58■□□□□ 0.89
COL27A1-208ENST00000494780 CLDN8P56748 225 aa20.58■□□□□ 0.89
COL27A1-208ENST00000494780 RPS26P62854 115 aaKnown RBP20.58■□□□□ 0.89
COL27A1-208ENST00000494780 EMX2Q04743 252 aa20.58■□□□□ 0.89
COL27A1-208ENST00000494780 KRTAP1-1Q07627 177 aa20.58■□□□□ 0.89
COL27A1-208ENST00000494780 GPR68Q15743 365 aa20.58■□□□□ 0.89
COL27A1-208ENST00000494780 C6orf120Q7Z4R8 191 aa20.58■□□□□ 0.89
COL27A1-208ENST00000494780 ATG4DQ86TL0 474 aaPredicted RBP20.58■□□□□ 0.89
COL27A1-208ENST00000494780 KBTBD8Q8NFY9 601 aa20.58■□□□□ 0.89
COL27A1-208ENST00000494780 TMEM234Q8WY98 164 aa20.58■□□□□ 0.89
COL27A1-208ENST00000494780 SERHL2Q9H4I8 314 aa20.58■□□□□ 0.89
COL27A1-208ENST00000494780 SERINC1Q9NRX5 453 aa20.58■□□□□ 0.89
COL27A1-208ENST00000494780 KCNE5Q9UJ90 142 aa20.58■□□□□ 0.89
COL27A1-208ENST00000494780 LIPT1Q9Y234 373 aa20.58■□□□□ 0.89
COL27A1-208ENST00000494780 MAGED1Q9Y5V3 778 aaPredicted RBP20.58■□□□□ 0.89
COL27A1-208ENST00000494780 RNF223E7ERA6 249 aa20.57■□□□□ 0.88
COL27A1-208ENST00000494780 CRLF1O75462 422 aa20.57■□□□□ 0.88
COL27A1-208ENST00000494780 LYZL6O75951 148 aa20.57■□□□□ 0.88
COL27A1-208ENST00000494780 SMU1Q2TAY7 513 aa20.57■□□□□ 0.88
COL27A1-208ENST00000494780 PGS1Q32NB8 556 aa20.57■□□□□ 0.88
COL27A1-208ENST00000494780 ARHGAP11BQ3KRB8 267 aa20.57■□□□□ 0.88
COL27A1-208ENST00000494780 ZNF300Q96RE9 604 aaPredicted RBP20.57■□□□□ 0.88
COL27A1-208ENST00000494780 TRIM2Q9C040 744 aa20.57■□□□□ 0.88
COL27A1-208ENST00000494780 QRSL1Q9H0R6 528 aaKnown RBP20.57■□□□□ 0.88
COL27A1-208ENST00000494780 ASIC5Q9NY37 505 aa20.57■□□□□ 0.88
COL27A1-208ENST00000494780 NOP53Q9NZM5 478 aaKnown RBP20.57■□□□□ 0.88
COL27A1-208ENST00000494780 FCMRO60667 390 aa20.56■□□□□ 0.88
COL27A1-208ENST00000494780 UGT2B17O75795 530 aa20.56■□□□□ 0.88
COL27A1-208ENST00000494780 CYP7B1O75881 506 aa20.56■□□□□ 0.88
COL27A1-208ENST00000494780 CSTAP01040 98 aa20.56■□□□□ 0.88
COL27A1-208ENST00000494780 BPGMP07738 259 aa20.56■□□□□ 0.88
COL27A1-208ENST00000494780 PGCP20142 388 aa20.56■□□□□ 0.88
COL27A1-208ENST00000494780 CDKN1AP38936 164 aa20.56■□□□□ 0.88
COL27A1-208ENST00000494780 SESN3P58005 492 aa20.56■□□□□ 0.88
COL27A1-208ENST00000494780 CSNK2A1P68400 391 aaPredicted RBP20.56■□□□□ 0.88
COL27A1-208ENST00000494780 DMTNQ08495 405 aa20.56■□□□□ 0.88
COL27A1-208ENST00000494780 PPA1Q15181 289 aa20.56■□□□□ 0.88
COL27A1-208ENST00000494780 STK11Q15831 433 aa20.56■□□□□ 0.88
COL27A1-208ENST00000494780 PGGHGQ32M88 737 aa20.56■□□□□ 0.88
COL27A1-208ENST00000494780 HEPHL1Q6MZM0 1159 aa20.56■□□□□ 0.88
COL27A1-208ENST00000494780 TMPPEQ6ZT21 453 aa20.56■□□□□ 0.88
COL27A1-208ENST00000494780 EIF3MQ7L2H7 374 aaKnown RBP20.56■□□□□ 0.88
COL27A1-208ENST00000494780 GALNT5Q7Z7M9 940 aa20.56■□□□□ 0.88
COL27A1-208ENST00000494780 P2RY8Q86VZ1 359 aa20.56■□□□□ 0.88
COL27A1-208ENST00000494780 SLC25A43Q8WUT9 341 aaPredicted RBP20.56■□□□□ 0.88
COL27A1-208ENST00000494780 OIT3Q8WWZ8 545 aa20.56■□□□□ 0.88
COL27A1-208ENST00000494780 ZNF75CPQ92670 426 aaPredicted RBP20.56■□□□□ 0.88
COL27A1-208ENST00000494780 MUCL1Q96DR8 90 aa20.56■□□□□ 0.88
COL27A1-208ENST00000494780 SLC35G5Q96KT7 338 aa20.56■□□□□ 0.88
COL27A1-208ENST00000494780 ZIM3Q96PE6 472 aa20.56■□□□□ 0.88
COL27A1-208ENST00000494780 REG4Q9BYZ8 158 aa20.56■□□□□ 0.88
COL27A1-208ENST00000494780 GRIP2Q9C0E4 1043 aa20.56■□□□□ 0.88
COL27A1-208ENST00000494780 ZNF350Q9GZX5 532 aa20.56■□□□□ 0.88
COL27A1-208ENST00000494780 ACER3Q9NUN7 267 aa20.56■□□□□ 0.88
COL27A1-208ENST00000494780 EXD2Q9NVH0 621 aa20.56■□□□□ 0.88
COL27A1-208ENST00000494780 ADAM21Q9UKJ8 722 aa20.56■□□□□ 0.88
COL27A1-208ENST00000494780 MKLN1Q9UL63 735 aa20.56■□□□□ 0.88
COL27A1-208ENST00000494780 RNF103-CHMP3A0A140T963 221 aa20.55■□□□□ 0.88
COL27A1-208ENST00000494780 C9JVG2 144 aa20.55■□□□□ 0.88
COL27A1-208ENST00000494780 RNASET2O00584 256 aaKnown RBP20.55■□□□□ 0.88
COL27A1-208ENST00000494780 THBS1P07996 1170 aa20.55■□□□□ 0.88
COL27A1-208ENST00000494780 COX5AP20674 150 aa20.55■□□□□ 0.88
COL27A1-208ENST00000494780 DIO1P49895 249 aa20.55■□□□□ 0.88
COL27A1-208ENST00000494780 IFFO1Q0D2I5 559 aa20.55■□□□□ 0.88
COL27A1-208ENST00000494780 MERTKQ12866 999 aa20.55■□□□□ 0.88
COL27A1-208ENST00000494780 TIMM23BQ5SRD1 257 aa20.55■□□□□ 0.88
COL27A1-208ENST00000494780 OR4F3Q6IEY1 312 aa20.55■□□□□ 0.88
COL27A1-208ENST00000494780 ZNF100Q8IYN0 542 aa20.55■□□□□ 0.88
COL27A1-208ENST00000494780 CLECL1Q8IZS7 167 aa20.55■□□□□ 0.88
COL27A1-208ENST00000494780 MIPOL1Q8TD10 442 aa20.55■□□□□ 0.88
COL27A1-208ENST00000494780 ZNF775Q96BV0 537 aaPredicted RBP20.55■□□□□ 0.88
COL27A1-208ENST00000494780 ROPN1BQ9BZX4 212 aaPredicted RBP20.55■□□□□ 0.88
COL27A1-208ENST00000494780 SLCO5A1Q9H2Y9 848 aa20.55■□□□□ 0.88
COL27A1-208ENST00000494780 ROPN1Q9HAT0 212 aaPredicted RBP20.55■□□□□ 0.88
COL27A1-208ENST00000494780 CISD1Q9NZ45 108 aaKnown RBP20.55■□□□□ 0.88
COL27A1-208ENST00000494780 CENPVL1A0A0U1RR11 272 aa20.54■□□□□ 0.88
COL27A1-208ENST00000494780 SULT2B1O00204 365 aa20.54■□□□□ 0.88
COL27A1-208ENST00000494780 PGM3O95394 542 aa20.54■□□□□ 0.88
COL27A1-208ENST00000494780 AGR2O95994 175 aa20.54■□□□□ 0.88
COL27A1-208ENST00000494780 GUSBP08236 651 aa20.54■□□□□ 0.88
COL27A1-208ENST00000494780 UBTFL6P0CB48 400 aaPredicted RBP20.54■□□□□ 0.88
COL27A1-208ENST00000494780 GGT1P19440 569 aa20.54■□□□□ 0.88
COL27A1-208ENST00000494780 IGHV1-2P23083 117 aa20.54■□□□□ 0.88
COL27A1-208ENST00000494780 EDNRAP25101 427 aa20.54■□□□□ 0.88
COL27A1-208ENST00000494780 FAPQ12884 760 aa20.54■□□□□ 0.88
COL27A1-208ENST00000494780 PDK3Q15120 406 aa20.54■□□□□ 0.88
COL27A1-208ENST00000494780 SYT14P1Q58G82 188 aa20.54■□□□□ 0.88
COL27A1-208ENST00000494780 C16orf62Q7Z3J2 963 aa20.54■□□□□ 0.88
COL27A1-208ENST00000494780 CLEC4FQ8N1N0 589 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms