RNA–Protein interactions for RNA: ENST00000494582.1

LINC00488-201, long intergenic non-protein coding RNA 488, humanhuman

TSL 1 (best) BASIC

Gene LINC00488, Length 2,520 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00488-201ENST00000494582 OR2AK2Q8NG84 335 aa9.4□□□□□ -0.9
LINC00488-201ENST00000494582 PHOSPHO2Q8TCD6 241 aa9.4□□□□□ -0.9
LINC00488-201ENST00000494582 GHSRQ92847 366 aa9.4□□□□□ -0.9
LINC00488-201ENST00000494582 CLP1Q92989 425 aaKnown RBP9.4□□□□□ -0.9
LINC00488-201ENST00000494582 KISS1RQ969F8 398 aaPredicted RBP9.4□□□□□ -0.9
LINC00488-201ENST00000494582 UROC1Q96N76 676 aa9.4□□□□□ -0.9
LINC00488-201ENST00000494582 MNTQ99583 582 aa9.4□□□□□ -0.9
LINC00488-201ENST00000494582 GAREM1Q9H706 876 aa9.4□□□□□ -0.9
LINC00488-201ENST00000494582 FKRPQ9H9S5 495 aa9.4□□□□□ -0.9
LINC00488-201ENST00000494582 TRIM36Q9NQ86 728 aa9.4□□□□□ -0.9
LINC00488-201ENST00000494582 SEMA4GQ9NTN9 838 aa9.4□□□□□ -0.9
LINC00488-201ENST00000494582 POLR2AP24928 1970 aaKnown RBP9.4□□□□□ -0.9
LINC00488-201ENST00000494582 NEDD8-MDP1E9PL57 170 aa9.4□□□□□ -0.91
LINC00488-201ENST00000494582 KPNA3O00505 521 aaPredicted RBP9.4□□□□□ -0.91
LINC00488-201ENST00000494582 ADAM12O43184 909 aa9.4□□□□□ -0.91
LINC00488-201ENST00000494582 GJB5O95377 273 aa9.4□□□□□ -0.91
LINC00488-201ENST00000494582 FUT1P19526 365 aa9.4□□□□□ -0.91
LINC00488-201ENST00000494582 MAT2AP31153 395 aaKnown RBP9.4□□□□□ -0.91
LINC00488-201ENST00000494582 MECP2P51608 486 aaKnown RBP9.4□□□□□ -0.91
LINC00488-201ENST00000494582 NR0B1P51843 470 aaKnown RBP9.4□□□□□ -0.91
LINC00488-201ENST00000494582 CLDN12P56749 244 aa9.4□□□□□ -0.91
LINC00488-201ENST00000494582 TRAM2Q15035 370 aa9.4□□□□□ -0.91
LINC00488-201ENST00000494582 C9orf152Q5JTZ5 239 aa9.4□□□□□ -0.91
LINC00488-201ENST00000494582 HES5Q5TA89 166 aa9.4□□□□□ -0.91
LINC00488-201ENST00000494582 LYPLAL1Q5VWZ2 237 aa9.4□□□□□ -0.91
LINC00488-201ENST00000494582 CDC73Q6P1J9 531 aa9.4□□□□□ -0.91
LINC00488-201ENST00000494582 ZCCHC12Q6PEW1 402 aa9.4□□□□□ -0.91
LINC00488-201ENST00000494582 SSX6Q7RTT6 188 aa9.4□□□□□ -0.91
LINC00488-201ENST00000494582 ARMC10Q8N2F6 343 aa9.4□□□□□ -0.91
LINC00488-201ENST00000494582 ZNF740Q8NDX6 193 aa9.4□□□□□ -0.91
LINC00488-201ENST00000494582 ELP5Q8TE02 316 aa9.4□□□□□ -0.91
LINC00488-201ENST00000494582 PXYLP1Q8TE99 480 aa9.4□□□□□ -0.91
LINC00488-201ENST00000494582 C4orf36Q96KX1 117 aa9.4□□□□□ -0.91
LINC00488-201ENST00000494582 PRRC1Q96M27 445 aa9.4□□□□□ -0.91
LINC00488-201ENST00000494582 TMEM231Q9H6L2 316 aa9.4□□□□□ -0.91
LINC00488-201ENST00000494582 DMRT3Q9NQL9 472 aa9.4□□□□□ -0.91
LINC00488-201ENST00000494582 ZFP57Q9NU63 452 aa9.4□□□□□ -0.91
LINC00488-201ENST00000494582 ASF1BQ9NVP2 202 aa9.4□□□□□ -0.91
LINC00488-201ENST00000494582 ABRACLQ9P1F3 81 aa9.4□□□□□ -0.91
LINC00488-201ENST00000494582 MKL2Q9ULH7 1088 aa9.4□□□□□ -0.91
LINC00488-201ENST00000494582 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.39□□□□□ -0.91
LINC00488-201ENST00000494582 DAPL1A0PJW8 107 aa9.39□□□□□ -0.91
LINC00488-201ENST00000494582 COLCA2A8K830 154 aa9.39□□□□□ -0.91
LINC00488-201ENST00000494582 J3QLW9 94 aa9.39□□□□□ -0.91
LINC00488-201ENST00000494582 CDC42EP2O14613 210 aa9.39□□□□□ -0.91
LINC00488-201ENST00000494582 LCMT2O60294 686 aaKnown RBP9.39□□□□□ -0.91
LINC00488-201ENST00000494582 KRT33AO76009 404 aa9.39□□□□□ -0.91
LINC00488-201ENST00000494582 MPC1LP0DKB6 136 aa9.39□□□□□ -0.91
LINC00488-201ENST00000494582 MGMTP16455 207 aa9.39□□□□□ -0.91
LINC00488-201ENST00000494582 ZNF19P17023 458 aa9.39□□□□□ -0.91
LINC00488-201ENST00000494582 IMPA1P29218 277 aa9.39□□□□□ -0.91
LINC00488-201ENST00000494582 PNLIPRP2P54317 469 aa9.39□□□□□ -0.91
LINC00488-201ENST00000494582 ZNF177Q13360 481 aaPredicted RBP9.39□□□□□ -0.91
LINC00488-201ENST00000494582 MAPK14Q16539 360 aa9.39□□□□□ -0.91
LINC00488-201ENST00000494582 H3F3CQ6NXT2 135 aa9.39□□□□□ -0.91
LINC00488-201ENST00000494582 JMJD6Q6NYC1 403 aaPredicted RBP9.39□□□□□ -0.91
LINC00488-201ENST00000494582 TMEM71Q6P5X7 295 aa9.39□□□□□ -0.91
LINC00488-201ENST00000494582 CXXC5Q7LFL8 322 aaKnown RBP9.39□□□□□ -0.91
LINC00488-201ENST00000494582 NKAIN4Q8IVV8 208 aa9.39□□□□□ -0.91
LINC00488-201ENST00000494582 DMRTC2Q8IXT2 367 aaPredicted RBP9.39□□□□□ -0.91
LINC00488-201ENST00000494582 CFAP206Q8IYR0 622 aa9.39□□□□□ -0.91
LINC00488-201ENST00000494582 ZNF671Q8TAW3 534 aa9.39□□□□□ -0.91
LINC00488-201ENST00000494582 BRIX1Q8TDN6 353 aaKnown RBP9.39□□□□□ -0.91
LINC00488-201ENST00000494582 TMEM169Q96HH4 297 aa9.39□□□□□ -0.91
LINC00488-201ENST00000494582 WDR77Q9BQA1 342 aaPredicted RBP9.39□□□□□ -0.91
LINC00488-201ENST00000494582 PDCD10Q9BUL8 212 aa9.39□□□□□ -0.91
LINC00488-201ENST00000494582 PDGFDQ9GZP0 370 aaPredicted RBP9.39□□□□□ -0.91
LINC00488-201ENST00000494582 CHST6Q9GZX3 395 aa9.39□□□□□ -0.91
LINC00488-201ENST00000494582 BRD9Q9H8M2 597 aa9.39□□□□□ -0.91
LINC00488-201ENST00000494582 IL21RQ9HBE5 538 aa9.39□□□□□ -0.91
LINC00488-201ENST00000494582 GPN1Q9HCN4 374 aaPredicted RBP9.39□□□□□ -0.91
LINC00488-201ENST00000494582 CDHR4A6H8M9 788 aa9.39□□□□□ -0.91
LINC00488-201ENST00000494582 CPSF4LA6NMK7 179 aaKnown RBP9.39□□□□□ -0.91
LINC00488-201ENST00000494582 GABARAPH6UMI1 98 aa9.39□□□□□ -0.91
LINC00488-201ENST00000494582 CLDN11O75508 207 aa9.39□□□□□ -0.91
LINC00488-201ENST00000494582 CHRM4P08173 479 aa9.39□□□□□ -0.91
LINC00488-201ENST00000494582 UBBP0CG47 229 aa9.39□□□□□ -0.91
LINC00488-201ENST00000494582 UBCP0CG48 685 aaKnown RBP9.39□□□□□ -0.91
LINC00488-201ENST00000494582 PRF1P14222 555 aa9.39□□□□□ -0.91
LINC00488-201ENST00000494582 TYRP1P17643 537 aa9.39□□□□□ -0.91
LINC00488-201ENST00000494582 PAICSP22234 425 aaKnown RBP9.39□□□□□ -0.91
LINC00488-201ENST00000494582 TRHRP34981 398 aaPredicted RBP9.39□□□□□ -0.91
LINC00488-201ENST00000494582 BUD31P41223 144 aaPredicted RBP9.39□□□□□ -0.91
LINC00488-201ENST00000494582 STARP49675 285 aa9.39□□□□□ -0.91
LINC00488-201ENST00000494582 P2RX1P51575 399 aa9.39□□□□□ -0.91
LINC00488-201ENST00000494582 RPS27AP62979 156 aaKnown RBP9.39□□□□□ -0.91
LINC00488-201ENST00000494582 UBA52P62987 128 aaKnown RBP9.39□□□□□ -0.91
LINC00488-201ENST00000494582 FUT5Q11128 374 aa9.39□□□□□ -0.91
LINC00488-201ENST00000494582 IRF5Q13568 498 aa9.39□□□□□ -0.91
LINC00488-201ENST00000494582 Q3ZCU0 254 aa9.39□□□□□ -0.91
LINC00488-201ENST00000494582 PLEKHN1Q494U1 663 aaPredicted RBP9.39□□□□□ -0.91
LINC00488-201ENST00000494582 CCDC157Q569K6 752 aa9.39□□□□□ -0.91
LINC00488-201ENST00000494582 LRRC73Q5JTD7 316 aa9.39□□□□□ -0.91
LINC00488-201ENST00000494582 UBE2NLQ5JXB2 153 aa9.39□□□□□ -0.91
LINC00488-201ENST00000494582 C10orf91Q5T1B1 145 aa9.39□□□□□ -0.91
LINC00488-201ENST00000494582 MED27Q6P2C8 311 aa9.39□□□□□ -0.91
LINC00488-201ENST00000494582 NIPAL3Q6P499 406 aa9.39□□□□□ -0.91
LINC00488-201ENST00000494582 CRTC1Q6UUV9 634 aa9.39□□□□□ -0.91
LINC00488-201ENST00000494582 DNAAF1Q8NEP3 725 aa9.39□□□□□ -0.91
LINC00488-201ENST00000494582 WFDC5Q8TCV5 224 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms