RNA–Protein interactions for RNA: ENST00000494411.5

PCMT1-209, Transcript of protein-L-isoaspartate (D-aspartate) O-methyltransferase, humanhuman

TSL 4

Gene PCMT1, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCMT1-209ENST00000494411 PIGMQ9H3S5 423 aa17.12■□□□□ 0.33
PCMT1-209ENST00000494411 RAD21L1Q9H4I0 556 aa17.12■□□□□ 0.33
PCMT1-209ENST00000494411 EXOSC3Q9NQT5 275 aaKnown RBP17.12■□□□□ 0.33
PCMT1-209ENST00000494411 FOXD3Q9UJU5 478 aaPredicted RBP17.12■□□□□ 0.33
PCMT1-209ENST00000494411 MCTS1Q9ULC4 181 aaKnown RBP17.12■□□□□ 0.33
PCMT1-209ENST00000494411 MPDZO75970 2070 aa17.12■□□□□ 0.33
PCMT1-209ENST00000494411 DSPPQ9NZW4 1301 aa17.12■□□□□ 0.33
PCMT1-209ENST00000494411 SPG11Q96JI7 2443 aa17.11■□□□□ 0.33
PCMT1-209ENST00000494411 GJE1A6NN92 205 aa17.11■□□□□ 0.33
PCMT1-209ENST00000494411 ADAM11O75078 769 aa17.11■□□□□ 0.33
PCMT1-209ENST00000494411 SYNGR4O95473 234 aa17.11■□□□□ 0.33
PCMT1-209ENST00000494411 DBIP07108 87 aaKnown RBP17.11■□□□□ 0.33
PCMT1-209ENST00000494411 TROVE2P10155 538 aaKnown RBP eCLIP17.11■□□□□ 0.33
PCMT1-209ENST00000494411 IL7RP16871 459 aa17.11■□□□□ 0.33
PCMT1-209ENST00000494411 KIR2DL2P43627 348 aaPredicted RBP17.11■□□□□ 0.33
PCMT1-209ENST00000494411 CPA2P48052 419 aa17.11■□□□□ 0.33
PCMT1-209ENST00000494411 CRISP3P54108 245 aa17.11■□□□□ 0.33
PCMT1-209ENST00000494411 EEF1A1P68104 462 aaKnown RBP17.11■□□□□ 0.33
PCMT1-209ENST00000494411 FADDQ13158 208 aa17.11■□□□□ 0.33
PCMT1-209ENST00000494411 GNA13Q14344 377 aa17.11■□□□□ 0.33
PCMT1-209ENST00000494411 TMEM176BQ3YBM2 270 aaPredicted RBP17.11■□□□□ 0.33
PCMT1-209ENST00000494411 PDSS1Q5T2R2 415 aa17.11■□□□□ 0.33
PCMT1-209ENST00000494411 EEF1A1P5Q5VTE0 462 aa17.11■□□□□ 0.33
PCMT1-209ENST00000494411 CGB2Q6NT52 195 aa17.11■□□□□ 0.33
PCMT1-209ENST00000494411 PEX5LQ8IYB4 626 aa17.11■□□□□ 0.33
PCMT1-209ENST00000494411 ZNF563Q8TA94 476 aa17.11■□□□□ 0.33
PCMT1-209ENST00000494411 TMEM234Q8WY98 164 aa17.11■□□□□ 0.33
PCMT1-209ENST00000494411 PMM1Q92871 262 aa17.11■□□□□ 0.33
PCMT1-209ENST00000494411 OSTF1Q92882 214 aa17.11■□□□□ 0.33
PCMT1-209ENST00000494411 MAL2Q969L2 176 aa17.11■□□□□ 0.33
PCMT1-209ENST00000494411 STARD4Q96DR4 205 aa17.11■□□□□ 0.33
PCMT1-209ENST00000494411 TMEM19Q96HH6 336 aa17.11■□□□□ 0.33
PCMT1-209ENST00000494411 RBM24Q9BX46 236 aaKnown RBP17.11■□□□□ 0.33
PCMT1-209ENST00000494411 COQ10BQ9H8M1 238 aa17.11■□□□□ 0.33
PCMT1-209ENST00000494411 ACER3Q9NUN7 267 aa17.11■□□□□ 0.33
PCMT1-209ENST00000494411 THUMPD1Q9NXG2 353 aaKnown RBP17.11■□□□□ 0.33
PCMT1-209ENST00000494411 DNAJB12Q9NXW2 375 aaKnown RBP17.11■□□□□ 0.33
PCMT1-209ENST00000494411 CALML5Q9NZT1 146 aa17.11■□□□□ 0.33
PCMT1-209ENST00000494411 VAPAQ9P0L0 249 aa17.11■□□□□ 0.33
PCMT1-209ENST00000494411 KCNN3Q9UGI6 736 aa17.11■□□□□ 0.33
PCMT1-209ENST00000494411 CCDC168Q8NDH2 2452 aa17.1■□□□□ 0.33
PCMT1-209ENST00000494411 TRBV5-3A0A0A0MS03 114 aa17.1■□□□□ 0.33
PCMT1-209ENST00000494411 TMEM247A6NEH6 219 aa17.1■□□□□ 0.33
PCMT1-209ENST00000494411 AP3D1O14617 1153 aa17.1■□□□□ 0.33
PCMT1-209ENST00000494411 SMNDC1O75940 238 aaKnown RBP eCLIP17.1■□□□□ 0.33
PCMT1-209ENST00000494411 VIMP08670 466 aaKnown RBP17.1■□□□□ 0.33
PCMT1-209ENST00000494411 BMP2P12643 396 aa17.1■□□□□ 0.33
PCMT1-209ENST00000494411 NID1P14543 1247 aa17.1■□□□□ 0.33
PCMT1-209ENST00000494411 KIR2DL3P43628 341 aa17.1■□□□□ 0.33
PCMT1-209ENST00000494411 CARD18P57730 90 aa17.1■□□□□ 0.33
PCMT1-209ENST00000494411 MERTKQ12866 999 aa17.1■□□□□ 0.33
PCMT1-209ENST00000494411 SF3A3Q12874 501 aaKnown RBP eCLIP17.1■□□□□ 0.334e-6■□□□□ 10.5
PCMT1-209ENST00000494411 GUSBP1Q15486 140 aa17.1■□□□□ 0.33
PCMT1-209ENST00000494411 MRPL2Q5T653 305 aaKnown RBP17.1■□□□□ 0.33
PCMT1-209ENST00000494411 PLEKHM3Q6ZWE6 761 aa17.1■□□□□ 0.33
PCMT1-209ENST00000494411 BTLAQ7Z6A9 289 aa17.1■□□□□ 0.33
PCMT1-209ENST00000494411 VRK2Q86Y07 508 aa17.1■□□□□ 0.33
PCMT1-209ENST00000494411 OR52P1PQ8NH57 321 aa17.1■□□□□ 0.33
PCMT1-209ENST00000494411 ZNF559Q9BR84 538 aa17.1■□□□□ 0.33
PCMT1-209ENST00000494411 SRXN1Q9BYN0 137 aa17.1■□□□□ 0.33
PCMT1-209ENST00000494411 IKZF5Q9H5V7 419 aa17.1■□□□□ 0.33
PCMT1-209ENST00000494411 SLC24A3Q9HC58 644 aa17.1■□□□□ 0.33
PCMT1-209ENST00000494411 A4GALTQ9NPC4 353 aa17.1■□□□□ 0.33
PCMT1-209ENST00000494411 GALNT8Q9NY28 637 aa17.1■□□□□ 0.33
PCMT1-209ENST00000494411 CRIM1Q9NZV1 1036 aa17.1■□□□□ 0.33
PCMT1-209ENST00000494411 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.1■□□□□ 0.33
PCMT1-209ENST00000494411 CLEC4AQ9UMR7 237 aa17.1■□□□□ 0.33
PCMT1-209ENST00000494411 SLC7A1P30825 629 aa17.09■□□□□ 0.33
PCMT1-209ENST00000494411 CPOXP36551 454 aa17.09■□□□□ 0.33
PCMT1-209ENST00000494411 PEX19P40855 299 aa17.09■□□□□ 0.33
PCMT1-209ENST00000494411 ZNF239Q16600 458 aaKnown RBP17.09■□□□□ 0.33
PCMT1-209ENST00000494411 METTL21CQ5VZV1 264 aa17.09■□□□□ 0.33
PCMT1-209ENST00000494411 C3orf33Q6P1S2 294 aa17.09■□□□□ 0.33
PCMT1-209ENST00000494411 ZNF836Q6ZNA1 936 aa17.09■□□□□ 0.33
PCMT1-209ENST00000494411 ZZZ3Q8IYH5 903 aa17.09■□□□□ 0.33
PCMT1-209ENST00000494411 C10orf111Q8N326 155 aa17.09■□□□□ 0.33
PCMT1-209ENST00000494411 OPN3Q9H1Y3 402 aaPredicted RBP17.09■□□□□ 0.33
PCMT1-209ENST00000494411 CCDC134Q9H6E4 229 aa17.09■□□□□ 0.33
PCMT1-209ENST00000494411 RLIMQ9NVW2 624 aa17.09■□□□□ 0.33
PCMT1-209ENST00000494411 LEF1Q9UJU2 399 aaPredicted RBP17.09■□□□□ 0.33
PCMT1-209ENST00000494411 A0A0G2JPF8 293 aa17.08■□□□□ 0.32
PCMT1-209ENST00000494411 A0A1W2PNR3 127 aa17.08■□□□□ 0.32
PCMT1-209ENST00000494411 CDHR4A6H8M9 788 aa17.08■□□□□ 0.32
PCMT1-209ENST00000494411 A8MXE2 369 aa17.08■□□□□ 0.32
PCMT1-209ENST00000494411 HNRNPCL2B2RXH8 293 aa17.08■□□□□ 0.32
PCMT1-209ENST00000494411 HNRNPCL3B7ZW38 293 aa17.08■□□□□ 0.32
PCMT1-209ENST00000494411 MSTNO14793 375 aa17.08■□□□□ 0.32
PCMT1-209ENST00000494411 ANGPT2O15123 496 aa17.08■□□□□ 0.32
PCMT1-209ENST00000494411 HNRNPCL1O60812 293 aaKnown RBP17.08■□□□□ 0.32
PCMT1-209ENST00000494411 PLGP00747 810 aaPredicted RBP17.08■□□□□ 0.32
PCMT1-209ENST00000494411 HNRNPCL4P0DMR1 293 aa17.08■□□□□ 0.32
PCMT1-209ENST00000494411 PPIBP23284 216 aaKnown RBP17.08■□□□□ 0.32
PCMT1-209ENST00000494411 ARFIP2P53365 341 aa17.08■□□□□ 0.32
PCMT1-209ENST00000494411 KRTAP10-9P60411 292 aa17.08■□□□□ 0.32
PCMT1-209ENST00000494411 SORDQ00796 357 aa17.08■□□□□ 0.32
PCMT1-209ENST00000494411 LIN52Q52LA3 116 aa17.08■□□□□ 0.32
PCMT1-209ENST00000494411 GCNT6Q5T4J0 391 aa17.08■□□□□ 0.32
PCMT1-209ENST00000494411 DLEU7Q6UYE1 221 aa17.08■□□□□ 0.32
PCMT1-209ENST00000494411 FAM214BQ7L5A3 538 aa17.08■□□□□ 0.32
PCMT1-209ENST00000494411 KIF18BQ86Y91 864 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms